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ATCC10864_006679-T1, ATCC10864_006679-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006679-T1
Unique NameATCC10864_006679-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:365340..366891+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006679-T1 ID=ATCC10864_006679-T1|Name=ATCC10864_006679-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1552bp|location=Sequence derived from alignment at MCQH01000169:365340..366891+ (Aspergillus niger ATCC 10864)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
CTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATATCGGCGGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCGTGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTGTATGTGTT
ACCTTTTCACCCCCTTCATGGAAAAGTATATGATGTAATATTGACTGATA
TATGTTGTGTGTAGATCATGGCACTCCTGTCTGTCTCAGTTTCTTACCCG
GCCCCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGACTAGGA
GGTCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACTCCTCAT
CAACAGTGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAA
TGTGAATGTGCCTGCTCCTTCTCATCCCCTCGCTACTGTAACCAATCCGG
GGACTGATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGT
CTGGATGCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTGGTAATGAATG
TGGTAAGCTTGGGGTCATGGATACGGTAATGGAGAGCATTGAGGAGTCGT
AA
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Coding sequence (CDS) from alignment at MCQH01000169:365340..366891+

>ATCC10864_006679-T1 ID=ATCC10864_006679-T1|Name=ATCC10864_006679-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2958bp|location=Sequence derived from alignment at MCQH01000169:365340..366891+ (Aspergillus niger ATCC 10864)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
CTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATATCGGCGGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCGTGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTATCATGGCA
CTCCTGTCTGTCTCAGTTTCTTACCCGGCCCCGGCCTGTCCTGACCTCTA
CTAGCATTCGGGGGATTGAGACTAGGAGGTCGAGGAGTAGACGGGCTAGG
AGTGTGAGGGGTGATACTACTCCTCATCAACAGTGTTCTGTTGAGGCTGG
GAGTTCGGCTGCGTCGCTGAGTGGGAATGTGAATGTGCCTGCTCCTTCTC
ATCCCCTCGCTACTGTAACCAATCCGGGGACTGATAATCTTATGGACAGC
GACGAGGGTGCGGTGGATGCTATGAGTCTGGATGCCCAGGTTGATCGGTT
TCTGCAAAGTGTTGGTGGTAATGAATGTGGTAAGCTTGGGGTCATGGATA
CGGTAATGGAGAGCATTGAGGAGTCGTAAATGCCTTGCACGCCCAGCCCC
TTCAAAGCCCCAGTGCCCAACACCAACCCGGCTCTGGAAGCCGTGGCAGA
GAAGCTTCGCGCCAGCGGCAGCAGAAGACTCCTCACCCCAGAAGGCATCG
GGGCGCTCTCCACCTCGACGAAGAACATCATCGACAATCTATATATCAAT
GTCCGAAAGAACTGCTGGGCAGACGCCATCTGCGAAACCCCAGCAGGCCT
CCGCTCTGGTCGAATGGACCCCACAGGTAGATGGCACCTTCGTAACCCTC
ACGTCGCCGCCTTCATCGACGACCTCTCCCACGCCATCCAACTCGGCGAT
ATCTCCGACGTCGACTACTACCTGTCCCGCAGAATCGCCCTCAACACCTG
CGACCGCGAGGGCAACTCCCTGCTCCACCTAGCACTAGTCTCCGGCCACT
TGGACATCGCCCGTCTCCTCCTCGACAGAGGCGCCAGCCCCCTATACAGC
TTTGACCCGGAAGTCCCTGAGCTCGACCAACTCTTCCAATGCCCCAGCCG
CGTTGCGCCCCAGCTCAGTTCCATCCGCGTCGACATCCTCCGTCTGCTGC
TCAGATACGGCGCCCCTATCCGCCGCTTCCCCACCCTCAACGTCCTCTTC
GACTCCCCCGGATACGCCAACGAACTCCTCGGTCTGCTCCTCGATAGACA
TCCGGATATCCTCCACGAACGCTCCAAGTCAGGCCACACCATCCTCCACT
CCGCCGCTGCGCTCGGCACGCCCGAGGCATGCGAGTTGCTGCTTACTCGC
GCGCCGCACCTCCGCACCACATATACAGACTGGGATGTGACGCCGCTGCA
CATGGCCATTCTGGAGAAAAATGAGCTGACAGCCTGCTTCCTCATATCGG
CGGATATGACCCTGCAGATGCGCCACGGGTACGACCGCACCGAGCTGTTC
CTGGCGGCGTGTATGGGCCTGCGCCGCGTCGTGAAGTTGTTGTTGTCTTC
TACGGCGTTCTTTGCGTACCCGCCGCAGAAGTGGGTTTCCGATGCGAAGG
CTGCTGTCCGTGTGGCGCTGTATATGGGGAATACGGAGGTGGTGGATATG
ATTAGACGGAATTTGGGATTATCATGGCACTCCTGTCTGTCTCAGTTTCT
TACCCGGCCCCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGA
CTAGGAGGTCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACT
CCTCATCAACAGTGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAG
TGGGAATGTGAATGTGCCTGCTCCTTCTCATCCCCTCGCTACTGTAACCA
ATCCGGGGACTGATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCT
ATGAGTCTGGATGCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTGGTAA
TGAATGTGGTAAGCTTGGGGTCATGGATACGGTAATGGAGAGCATTGAGG
AGTCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006679ATCC10864_006679Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006679-T1.exon1ATCC10864_006679-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006679-T1.exon2ATCC10864_006679-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006679-T1.cdsATCC10864_006679-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006679-T1ATCC10864_006679-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
InterProIPR002110
Properties
Property NameValue
NoteantiSMASH:Cluster_1000169.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:365340..366891 +
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