You are here

Home

ATCC10864_006722-T1, ATCC10864_006722-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006722-T1
Unique NameATCC10864_006722-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:483078..483948-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006722-T1 ID=ATCC10864_006722-T1|Name=ATCC10864_006722-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=871bp|location=Sequence derived from alignment at MCQH01000169:483078..483948- (Aspergillus niger ATCC 10864)
ATGGTATAGTCTCTTTTCCAGCTGTAGCACATGTTCCTTCGAGTCATGGA
ATATCCGTCCACTAACATCCCCCCACCAGCCTCACGCAGACTCCTCTTAC
TTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGA
GCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGGTACGATCTTCTT
ACCTCTAACTCCTATCTCTCCCATATCCAATTCACCAGCTAACCAACCAC
TTCTCCCACCGCCAACAGGTCAGGTAAGAACAACTTCAACTATCGCGCCC
CCTCTCACCCAAAGAGCACAGCAACCTAACCCTCTCCAAACCAATACAGT
AATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCC
CGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACA
AGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCC
GTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCG
CTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCG
TCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGC
AGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGGTGAGTAC
TGGATCTATGTTATCTGTATCTAATCTAGTGGATGATGGCTGATGGTGTA
TGTTGGGCAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATG
GATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTG
GCGGAGTGCTGTGATTGGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:483078..483948-

>ATCC10864_006722-T1 ID=ATCC10864_006722-T1|Name=ATCC10864_006722-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3000bp|location=Sequence derived from alignment at MCQH01000169:483078..483948- (Aspergillus niger ATCC 10864)
ACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGA
TGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCT
GTGATTGGTGATAATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTA
CGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACA
TCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGC
AAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATG
TCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGC
GCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCG
TGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGG
GGAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGCCTCACGCAGA
CTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCC
AGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGATG
ACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGA
TGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCT
GTGATTGGTGATAATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTA
CGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACA
TCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGC
AAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATG
TCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGC
GCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCG
TGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGG
GGAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGCCTCACGCAGA
CTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCC
AGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGATG
ACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGA
TGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCT
GTGATTGGTGATAATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTA
CGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACA
TCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGC
AAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATG
TCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGC
GCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCG
TGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGG
GGAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGCCTCACGCAGA
CTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCC
AGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGATG
ACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGA
TGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCT
GTGATTGGTGATAATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTA
CGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACA
TCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGC
AAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATG
TCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGC
GCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCG
TGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGG
GGAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGCCTCACGCAGA
CTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCC
AGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGATG
ACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGA
TGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCT
GTGATTGGTGATAATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTA
CGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACA
TCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGC
AAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATG
TCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGC
GCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCG
TGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGG
GGAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGCCTCACGCAGA
CTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCC
AGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006722ATCC10864_006722Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006722-T1ATCC10864_006722-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006722-T1.cdsATCC10864_006722-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006722-T1.exon5ATCC10864_006722-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006722-T1.exon4ATCC10864_006722-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006722-T1.exon3ATCC10864_006722-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006722-T1.exon2ATCC10864_006722-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006722-T1.exon1ATCC10864_006722-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003018
InterProIPR000614
InterProIPR029016
PFAMPF13185
PFAMPF01590
Properties
Property NameValue
NoteantiSMASH:Cluster_1000169.5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:483078..483948 -
Powered by Drupal