You are here

Home

ATCC10864_006778-T1, ATCC10864_006778-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006778-T1
Unique NameATCC10864_006778-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:663690..664729+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006778-T1 ID=ATCC10864_006778-T1|Name=ATCC10864_006778-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1040bp|location=Sequence derived from alignment at MCQH01000169:663690..664729+ (Aspergillus niger ATCC 10864)
ATGTACAACCTCGTGGGCTTTCCGGCACTGCTATGCCTCGTGCTGGCTGT
GGCTCCCGTTCTGTCTGCACCTGTCGCTGCGGGAGTATGTTAAAATTCAA
TCTCAATCTCAAATAAAAGCATCAACGAAGCTGACACATGCTGCAGGATG
GAGCCATTGTGCGAAGACAGAGCCACCATCTCAATACCAACACTCAGTCC
GGCTCTAACATGGGCTTCTCGATCCCTGATGGTCCATCCTTCAACTCTGG
CCAGTATGCCTCCAACAGATTTCGTGAAGACCGTGGGGGCGACGATGATG
ATGAGGGCTCAAGCGAGTCCAGCAACACCAACGCAGGCAATGGGATGAAT
ATCGGCATCCCGGGTGGTCCCAGCATCAACATGGGCAACTACTTCAGTAA
CAACTATGAGGAGACTGAAGAGTCGCGACCAAACCCTTCAACTACTTCCA
CTACGACTATCCCAGAGTCCACAACGACCCCTCCACCTCCGCCAGTTAAC
CCTCCGCCAGTCAACCCTCCGATCGAGACTTCTGTTCCTGCTCCTCCTGC
CCCTCCCGCTACATCTACAACTATAACTGACTCTACCCAACCCCCTCCTG
CTCCCCCTACAACTACTCCTCCTCCTGCTCCTCCAACCACCACTCCACCA
GCTGCTCCCCCTACCACCGCTCCCCCTACCACTGCTCCCCCTGCTCCCCC
TGCTCCGTCTACCCCCTCCGAACCGGCTCCTCCTGCTGAGACCGAGGAAC
CTGAAGAGCCAGTCGTGCAAGAATGCCCAGCACCGGAGCCAGAGCCACAG
CCTGAGCCCGAGCAGTCTCCTGAGCCTTCTTCTGATCATGGACCTTCCCC
TGAACCGGAGTCATCTCCTGCCCCCGAGCCTACCCCTGTACCTCAGCCTA
ACCCTACACCGAGCCCTCAACCGGAGCCCCAGCCCCAGCCCCAACCTGAC
GACGAGTCTGCATCCGAGCCCAGGATCGCACCCACTCCTTCTCCAGCTGC
TCCAGCATTGCCTGCATACACCTGCCAATGCCCTGCATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:663690..664729+

>ATCC10864_006778-T1 ID=ATCC10864_006778-T1|Name=ATCC10864_006778-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1956bp|location=Sequence derived from alignment at MCQH01000169:663690..664729+ (Aspergillus niger ATCC 10864)
ATGTACAACCTCGTGGGCTTTCCGGCACTGCTATGCCTCGTGCTGGCTGT
GGCTCCCGTTCTGTCTGCACCTGTCGCTGCGGGAGATGGAGCCATTGTGC
GAAGACAGAGCCACCATCTCAATACCAACACTCAGTCCGGCTCTAACATG
GGCTTCTCGATCCCTGATGGTCCATCCTTCAACTCTGGCCAGTATGCCTC
CAACAGATTTCGTGAAGACCGTGGGGGCGACGATGATGATGAGGGCTCAA
GCGAGTCCAGCAACACCAACGCAGGCAATGGGATGAATATCGGCATCCCG
GGTGGTCCCAGCATCAACATGGGCAACTACTTCAGTAACAACTATGAGGA
GACTGAAGAGTCGCGACCAAACCCTTCAACTACTTCCACTACGACTATCC
CAGAGTCCACAACGACCCCTCCACCTCCGCCAGTTAACCCTCCGCCAGTC
AACCCTCCGATCGAGACTTCTGTTCCTGCTCCTCCTGCCCCTCCCGCTAC
ATCTACAACTATAACTGACTCTACCCAACCCCCTCCTGCTCCCCCTACAA
CTACTCCTCCTCCTGCTCCTCCAACCACCACTCCACCAGCTGCTCCCCCT
ACCACCGCTCCCCCTACCACTGCTCCCCCTGCTCCCCCTGCTCCGTCTAC
CCCCTCCGAACCGGCTCCTCCTGCTGAGACCGAGGAACCTGAAGAGCCAG
TCGTGCAAGAATGCCCAGCACCGGAGCCAGAGCCACAGCCTGAGCCCGAG
CAGTCTCCTGAGCCTTCTTCTGATCATGGACCTTCCCCTGAACCGGAGTC
ATCTCCTGCCCCCGAGCCTACCCCTGTACCTCAGCCTAACCCTACACCGA
GCCCTCAACCGGAGCCCCAGCCCCAGCCCCAACCTGACGACGAGTCTGCA
TCCGAGCCCAGGATCGCACCCACTCCTTCTCCAGCTGCTCCAGCATTGCC
TGCATACACCTGCCAATGCCCTGCATGAATGTACAACCTCGTGGGCTTTC
CGGCACTGCTATGCCTCGTGCTGGCTGTGGCTCCCGTTCTGTCTGCACCT
GTCGCTGCGGGAGATGGAGCCATTGTGCGAAGACAGAGCCACCATCTCAA
TACCAACACTCAGTCCGGCTCTAACATGGGCTTCTCGATCCCTGATGGTC
CATCCTTCAACTCTGGCCAGTATGCCTCCAACAGATTTCGTGAAGACCGT
GGGGGCGACGATGATGATGAGGGCTCAAGCGAGTCCAGCAACACCAACGC
AGGCAATGGGATGAATATCGGCATCCCGGGTGGTCCCAGCATCAACATGG
GCAACTACTTCAGTAACAACTATGAGGAGACTGAAGAGTCGCGACCAAAC
CCTTCAACTACTTCCACTACGACTATCCCAGAGTCCACAACGACCCCTCC
ACCTCCGCCAGTTAACCCTCCGCCAGTCAACCCTCCGATCGAGACTTCTG
TTCCTGCTCCTCCTGCCCCTCCCGCTACATCTACAACTATAACTGACTCT
ACCCAACCCCCTCCTGCTCCCCCTACAACTACTCCTCCTCCTGCTCCTCC
AACCACCACTCCACCAGCTGCTCCCCCTACCACCGCTCCCCCTACCACTG
CTCCCCCTGCTCCCCCTGCTCCGTCTACCCCCTCCGAACCGGCTCCTCCT
GCTGAGACCGAGGAACCTGAAGAGCCAGTCGTGCAAGAATGCCCAGCACC
GGAGCCAGAGCCACAGCCTGAGCCCGAGCAGTCTCCTGAGCCTTCTTCTG
ATCATGGACCTTCCCCTGAACCGGAGTCATCTCCTGCCCCCGAGCCTACC
CCTGTACCTCAGCCTAACCCTACACCGAGCCCTCAACCGGAGCCCCAGCC
CCAGCCCCAACCTGACGACGAGTCTGCATCCGAGCCCAGGATCGCACCCA
CTCCTTCTCCAGCTGCTCCAGCATTGCCTGCATACACCTGCCAATGCCCT
GCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006778ATCC10864_006778Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006778-T1.exon1ATCC10864_006778-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006778-T1.exon2ATCC10864_006778-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006778-T1.cdsATCC10864_006778-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006778-T1ATCC10864_006778-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:663690..664729 +
Powered by Drupal