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ATCC10864_006842-T1, ATCC10864_006842-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006842-T1
Unique NameATCC10864_006842-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:33791..35604+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006842-T1 ID=ATCC10864_006842-T1|Name=ATCC10864_006842-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1814bp|location=Sequence derived from alignment at MCQH01000170:33791..35604+ (Aspergillus niger ATCC 10864)
ATGTCGAGTGAGAAGGAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTGTAAGTGTCCCCTT
TCCCCTCCCCTTATGAACTGCTGCTGGACATCTCATCCTGAACGCGATCT
CACACACACTCACACACAGCACCGCTTTCCAACCGCTGTATGGCCAGTTG
GCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGCCGTGGCAATATT
TGCATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGC
TGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATG
ACACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTT
CATGGCCATCATCTTCACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGT
TTATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGCTGGGTGTTCTAC
ATCAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCT
GCAGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGAAGATGAGCCGCA
TCGACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTCACCTCCGTCCTC
ATTGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCGCTCCTGGCATGT
GCTGGTTCCCCTCCTGGTCGGATTTGCGGGCACGGGCTTCTTTCACTTCT
ACGAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCGACACGTATCCTC
GCCAACAACCGGACCACCTCCATTGTCCTCTTCTGTTCATTCTGCCAGTT
TCTGCTATCCTTCTGGACCATCTACTTCCTGCCCATCTACTTCCAGGGCG
TCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTG
ATTACCAGTCTGCCCATCGCCATGCTCTTTGGCAATCTGCTCACCCGTTG
GGGCCGGTACAAGCCCATCCACATTGTGGCTTTCATGCTGATCACCCTGG
GCACCGGGCTGTTCATCCGCCTGGATCAGCACTCGTCCATGGCGGAGTAT
GTCATCTTCCAGATCATCACCGCTGTGGGCACGGGGATGATCATGTCGAC
CTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGACACTCAGGTGGCCCCCG
CGACGGCGACTTGGGGCTTCTTGCGAGCGTACGGCGGCGTCTGGGGGGTG
GCCATCCCGGGCGCGATCTTCAACTCCCAGATCCAGACCAATCTGAGCAA
GCGCGTGAGTGATCCGGATGTGCGACGCACCCTGGGGAGTGGATCGGCCT
ACTCGCATGTCTCAAGCTCCTACATTCGCACCCTGCCCGCCGACGTCCGC
GATGATGTGGTCAGCGTCTATGTCGACGCCCTCCGCATTGTGTGGGCCAC
CGCCACGGCGTTTGCTGGACTGTGCTTCCTGCTCACCTTGCTGGAGAAGG
AGGTCCCCTTGCGCACCTCGGTGAAATCAGACTACGGGATGCGTCGTCGT
GAGCAGGAGAAGACGACCGCAGGGGATAGCAATGGGAATGCGGAGTCCAG
CCAGTCCAACTCGAGCCCGGACGCCTCGTCTACACCGCGCCCTGCTGACC
CGCATTCATCATAG
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Coding sequence (CDS) from alignment at MCQH01000170:33791..35604+

>ATCC10864_006842-T1 ID=ATCC10864_006842-T1|Name=ATCC10864_006842-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3462bp|location=Sequence derived from alignment at MCQH01000170:33791..35604+ (Aspergillus niger ATCC 10864)
ATGTCGAGTGAGAAGGAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTCACCGCTTTCCAAC
CGCTGTATGGCCAGTTGGCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATC
GGGGCCGTGGCAATATTTGCATTGGGCAGTGGCATCAGCGGCGGTGCCAG
CAGCTCAGCCATGCTGCTGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCG
GCGGCATCAGTCTCATGACACAGTTGGTCATTAGTGACCTGGTGTCGGTG
CGTGAACGAGGCAAGTTCATGGCCATCATCTTCACCACCTTCTCGCTGGG
GACCTCGCTGGGCCCGTTTATTGGGGGCGCGCTGGTCGACAACACCACCT
GGCGCTGGGTGTTCTACATCAACTTACCCATCGCCGGCGCCGCCCTCGTC
TTGCTGTACTTCTTTCTGCAGGTCCATTTCCAGCGGCGACTCACGGTGCG
ACAGAAGATGAGCCGCATCGACTTCGTGGGTAATGCCATTCTGATTGCCT
CGGTCACCTCCGTCCTCATTGCCCTCTCCTGGGGCGGATCCCGGTATAGC
TGGCGCTCCTGGCATGTGCTGGTTCCCCTCCTGGTCGGATTTGCGGGCAC
GGGCTTCTTTCACTTCTACGAAAGTACCCGCTTCTGCAAGGAGCCCACGT
TGCCGACACGTATCCTCGCCAACAACCGGACCACCTCCATTGTCCTCTTC
TGTTCATTCTGCCAGTTTCTGCTATCCTTCTGGACCATCTACTTCCTGCC
CATCTACTTCCAGGGCGTCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCT
TACTCCTCCCGTTTGTGATTACCAGTCTGCCCATCGCCATGCTCTTTGGC
AATCTGCTCACCCGTTGGGGCCGGTACAAGCCCATCCACATTGTGGCTTT
CATGCTGATCACCCTGGGCACCGGGCTGTTCATCCGCCTGGATCAGCACT
CGTCCATGGCGGAGTATGTCATCTTCCAGATCATCACCGCTGTGGGCACG
GGGATGATCATGTCGACCTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGA
CACTCAGGTGGCCCCCGCGACGGCGACTTGGGGCTTCTTGCGAGCGTACG
GCGGCGTCTGGGGGGTGGCCATCCCGGGCGCGATCTTCAACTCCCAGATC
CAGACCAATCTGAGCAAGCGCGTGAGTGATCCGGATGTGCGACGCACCCT
GGGGAGTGGATCGGCCTACTCGCATGTCTCAAGCTCCTACATTCGCACCC
TGCCCGCCGACGTCCGCGATGATGTGGTCAGCGTCTATGTCGACGCCCTC
CGCATTGTGTGGGCCACCGCCACGGCGTTTGCTGGACTGTGCTTCCTGCT
CACCTTGCTGGAGAAGGAGGTCCCCTTGCGCACCTCGGTGAAATCAGACT
ACGGGATGCGTCGTCGTGAGCAGGAGAAGACGACCGCAGGGGATAGCAAT
GGGAATGCGGAGTCCAGCCAGTCCAACTCGAGCCCGGACGCCTCGTCTAC
ACCGCGCCCTGCTGACCCGCATTCATCATAGATGTCGAGTGAGAAGGAAA
CCGCCCCGAATGCTCCCTCCCCTCCAGCACCACCGCCACCGTCAGATCCT
CCGCGGCGAGATTGGCGCTTTTGGGCCATTTTCCCTCCGCTATGCGTGGC
TACATTACTGTCAGCGCTAGAATCTACGGTCGTGTCGACGGCCCTGCCCT
CCATTGTGGATGATCTCCACTCGGGAAATCTGTACATCTGGTTTGTCAAT
GGCTACTTCTTAACTTTCACCGCTTTCCAACCGCTGTATGGCCAGTTGGC
CCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGCCGTGGCAATATTTG
CATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGCTG
GTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATGAC
ACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTTCA
TGGCCATCATCTTCACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGTTT
ATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGCTGGGTGTTCTACAT
CAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCTGC
AGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGAAGATGAGCCGCATC
GACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTCACCTCCGTCCTCAT
TGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCGCTCCTGGCATGTGC
TGGTTCCCCTCCTGGTCGGATTTGCGGGCACGGGCTTCTTTCACTTCTAC
GAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCGACACGTATCCTCGC
CAACAACCGGACCACCTCCATTGTCCTCTTCTGTTCATTCTGCCAGTTTC
TGCTATCCTTCTGGACCATCTACTTCCTGCCCATCTACTTCCAGGGCGTC
CTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTGAT
TACCAGTCTGCCCATCGCCATGCTCTTTGGCAATCTGCTCACCCGTTGGG
GCCGGTACAAGCCCATCCACATTGTGGCTTTCATGCTGATCACCCTGGGC
ACCGGGCTGTTCATCCGCCTGGATCAGCACTCGTCCATGGCGGAGTATGT
CATCTTCCAGATCATCACCGCTGTGGGCACGGGGATGATCATGTCGACCT
TGCTGCCCGCCGTGCAGGCCCCATTGCAGGACACTCAGGTGGCCCCCGCG
ACGGCGACTTGGGGCTTCTTGCGAGCGTACGGCGGCGTCTGGGGGGTGGC
CATCCCGGGCGCGATCTTCAACTCCCAGATCCAGACCAATCTGAGCAAGC
GCGTGAGTGATCCGGATGTGCGACGCACCCTGGGGAGTGGATCGGCCTAC
TCGCATGTCTCAAGCTCCTACATTCGCACCCTGCCCGCCGACGTCCGCGA
TGATGTGGTCAGCGTCTATGTCGACGCCCTCCGCATTGTGTGGGCCACCG
CCACGGCGTTTGCTGGACTGTGCTTCCTGCTCACCTTGCTGGAGAAGGAG
GTCCCCTTGCGCACCTCGGTGAAATCAGACTACGGGATGCGTCGTCGTGA
GCAGGAGAAGACGACCGCAGGGGATAGCAATGGGAATGCGGAGTCCAGCC
AGTCCAACTCGAGCCCGGACGCCTCGTCTACACCGCGCCCTGCTGACCCG
CATTCATCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006842ATCC10864_006842Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006842-T1.exon1ATCC10864_006842-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006842-T1.exon2ATCC10864_006842-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006842-T1.cdsATCC10864_006842-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006842-T1ATCC10864_006842-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000170.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:33791..35604 +
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