You are here

Home

ATCC10864_006919-T1, ATCC10864_006919-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006919-T1
Unique NameATCC10864_006919-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:218595..218924+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006919-T1 ID=ATCC10864_006919-T1|Name=ATCC10864_006919-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=330bp|location=Sequence derived from alignment at MCQH01000170:218595..218924+ (Aspergillus niger ATCC 10864)
ATGTCGCTGCGCAAGGAGGATATTAGTATCACCTCCTCGTTAACTGCCCT
AGGCCTTAATTCCTTGGTGAGTGTCGAGATCCGCAGATGGTGGCGGCAGA
ATCTTGGGCTGGAAATCAGCGTGTTGCAAATCACCTCGTTGGATTCCGTC
CAACAGCTAGGTGTGCTCGCTATCGATTCACTTCGGGAGAAGCATCTAGG
AGGTGAGGGGCAGGTTCCTGCCGCTAAGAAGTACATGACGTTCACCAAAA
TGCATTTCTCCACACACAATCCAGGAAGTGTTCAACGCATGATATACAGT
TTCCGTTTCTGGTATGTATCGCAGGCCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000170:218595..218924+

>ATCC10864_006919-T1 ID=ATCC10864_006919-T1|Name=ATCC10864_006919-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=330bp|location=Sequence derived from alignment at MCQH01000170:218595..218924+ (Aspergillus niger ATCC 10864)
ATGTCGCTGCGCAAGGAGGATATTAGTATCACCTCCTCGTTAACTGCCCT
AGGCCTTAATTCCTTGGTGAGTGTCGAGATCCGCAGATGGTGGCGGCAGA
ATCTTGGGCTGGAAATCAGCGTGTTGCAAATCACCTCGTTGGATTCCGTC
CAACAGCTAGGTGTGCTCGCTATCGATTCACTTCGGGAGAAGCATCTAGG
AGGTGAGGGGCAGGTTCCTGCCGCTAAGAAGTACATGACGTTCACCAAAA
TGCATTTCTCCACACACAATCCAGGAAGTGTTCAACGCATGATATACAGT
TTCCGTTTCTGGTATGTATCGCAGGCCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006919ATCC10864_006919Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006919-T1.exon1ATCC10864_006919-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006919-T1.cdsATCC10864_006919-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006919-T1ATCC10864_006919-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009081
InterProIPR036736
PFAMPF00550
Properties
Property NameValue
NoteantiSMASH:Cluster_1000170.4
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:218595..218924 +
Powered by Drupal