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ATCC10864_006930-T1, ATCC10864_006930-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006930-T1
Unique NameATCC10864_006930-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:244127..245437-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006930-T1 ID=ATCC10864_006930-T1|Name=ATCC10864_006930-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1311bp|location=Sequence derived from alignment at MCQH01000170:244127..245437- (Aspergillus niger ATCC 10864)
ATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGC
CTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGT
ATCCGTGCTGCTACAGTAAGCACACCATGCCTCGTAATTCGCACATGTTC
TGACATATCATCTTCAAGGCGGACAATGTGGTGTAGGAACCTACTGCCTG
GGAGGTTGCAACCCTCTAGAATCGTACTCGCTCGACAGCTGCACGCCCGA
GCCAATCTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGG
TCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTAC
AGCGGCTACCCCAAGATCAAGAATGAAAGTCTGTGGTTGACGATGCCCAA
CGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCA
AGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGT
TTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGG
ATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGA
ACTGTATGTTCCGCAGATCAGTTTTATGCACCTAAACTAACAATTCTAGA
TACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAAT
GGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCATC
GATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCAC
CTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCTA
TCTGGCCCGGTGGCTCGGAAGCCGAGGGACAGGGTACTATTGAATGGGCC
GGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACTT
CTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCTG
GCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGGT
CTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACCT
GCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCTG
CCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAGC
AGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGCG
CGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTGGTTGCACTGG
GTCTGTTTTAG
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Coding sequence (CDS) from alignment at MCQH01000170:244127..245437-

>ATCC10864_006930-T1 ID=ATCC10864_006930-T1|Name=ATCC10864_006930-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3636bp|location=Sequence derived from alignment at MCQH01000170:244127..245437- (Aspergillus niger ATCC 10864)
ATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAA
TGGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCAT
CGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCA
CCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCT
ATCTGGCCCGGTGGCTCGGAAGCCGAGGGACAGGGTACTATTGAATGGGC
CGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACT
TCTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCT
GGCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGG
TCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACC
TGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCT
GCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAG
CAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGC
GCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTGGTTGCACTG
GGTCTGTTTTAGGCGGACAATGTGGTGTAGGAACCTACTGCCTGGGAGGT
TGCAACCCTCTAGAATCGTACTCGCTCGACAGCTGCACGCCCGAGCCAAT
CTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGGTCCTGT
ACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTACAGCGGC
TACCCCAAGATCAAGAATGAAAGTCTGTGGTTGACGATGCCCAACGGCAC
GACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCAAGATCT
CGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGTTTCATT
CTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGGATACAA
TCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGAACTATG
CGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGCCTC
GGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGTATC
CGTGCTGCTACAATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAAC
ACCTTTGACGAATGGCATACCTACACGATCGACTGGAAGCCCGATGTGCT
GGAGTGGCTCATCGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTA
CCTACAACGCCACCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGG
CTGGAGATGTCTATCTGGCCCGGTGGCTCGGAAGCCGAGGGACAGGGTAC
TATTGAATGGGCCGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGG
AGTACGGCTACTTCTATGCGCAATACAAGGACATCACGGTCGAGTGCTAC
CCTGCCCCGTCTGGCACCATCGACAAAGGTGACACATCCTACGTGTACAC
GAGCGACAGCGGTCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCG
TGCTTTACAACCTGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAG
ATGTCTGATTCTGCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCAC
CGGCGGCAGCAGCAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCG
GCTATGGTGAGCGCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCC
GTGGTTGCACTGGGTCTGTTTTAGGCGGACAATGTGGTGTAGGAACCTAC
TGCCTGGGAGGTTGCAACCCTCTAGAATCGTACTCGCTCGACAGCTGCAC
GCCCGAGCCAATCTGCAAGAATCAGACCTACACGTTTACGAACATGGACA
ATGCGGTCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGG
GTGTACAGCGGCTACCCCAAGATCAAGAATGAAAGTCTGTGGTTGACGAT
GCCCAACGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGT
ACGGCAAGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTG
ACGGGTTTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATG
GGTTGGATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCG
TGGAGAACTATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGC
GGCCACCGCCTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTC
CGGAAGAGTATCCGTGCTGCTACAATACCAATGAGGTCAATGCCGCCGTG
TCTACCGGCAACACCTTTGACGAATGGCATACCTACACGATCGACTGGAA
GCCCGATGTGCTGGAGTGGCTCATCGATGGCACTGTGATGCGCACCCTGA
CCAAGAACTCTACCTACAACGCCACCTCGGGTATCTACCAATACCCGCAG
ACTCCATCCCGGCTGGAGATGTCTATCTGGCCCGGTGGCTCGGAAGCCGA
GGGACAGGGTACTATTGAATGGGCCGGCGGTCTCATCGACTGGGACAGCA
CGGATATCAAGGAGTACGGCTACTTCTATGCGCAATACAAGGACATCACG
GTCGAGTGCTACCCTGCCCCGTCTGGCACCATCGACAAAGGTGACACATC
CTACGTGTACACGAGCGACAGCGGTCTCTCGGACACCATTGAACTTTCCG
GCAACAGCACCGTGCTTTACAACCTGCAGGATACTGGCTTGAACATGACG
GCTGGCACCAAGATGTCTGATTCTGCCACGGCCTCGGGATCCAGCTCTGG
AGCCAGTAGCACCGGCGGCAGCAGCAGCAGCAGCAGCAGCAAGAAGGAGA
GTGCGGCATCCGGCTATGGTGAGCGCGTGATGGAGGGATCGGTGCTTGCG
GCCGTTGGTGCCGTGGTTGCACTGGGTCTGTTTTAGGCGGACAATGTGGT
GTAGGAACCTACTGCCTGGGAGGTTGCAACCCTCTAGAATCGTACTCGCT
CGACAGCTGCACGCCCGAGCCAATCTGCAAGAATCAGACCTACACGTTTA
CGAACATGGACAATGCGGTCCTGTACGACCACTACCTTGGTAACGCCTCC
GAATACGATTGGGTGTACAGCGGCTACCCCAAGATCAAGAATGAAAGTCT
GTGGTTGACGATGCCCAACGGCACGACGGGCAGTCTGTACTCCCTCAATC
ATTACATCTGGTACGGCAAGATCTCGGCCAAGATCAAGAGCAGCCGGACG
CAGGGTGTTGTGACGGGTTTCATTCTGATGTCGGATGATTTTGATGAGAT
CGACCTTGAATGGGTTGGATACAATCTTTCGAGCGCGCAGACAAACTTTT
ACTTCCAGGGCGTGGAGAACTATGCGCCACATTCCGGCATGGTTCGTGGC
CTGTCTGGCTGCGGCCACCGCCTCGGCCTCTGCCCCGACTTGCAGCACCG
ACAGCAAGTGTCCGGAAGAGTATCCGTGCTGCTACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0071555cell wall organization
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006930ATCC10864_006930Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006930-T1ATCC10864_006930-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006930-T1.cdsATCC10864_006930-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006930-T1.exon3ATCC10864_006930-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006930-T1.exon2ATCC10864_006930-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006930-T1.exon1ATCC10864_006930-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00722
InterProIPR017168
InterProIPR000757
InterProIPR013320
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH16
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:244127..245437 -
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