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ATCC10864_006989-T1, ATCC10864_006989-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006989-T1
Unique NameATCC10864_006989-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:416987..418051-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006989-T1 ID=ATCC10864_006989-T1|Name=ATCC10864_006989-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1065bp|location=Sequence derived from alignment at MCQH01000170:416987..418051- (Aspergillus niger ATCC 10864)
ATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAGGTAAGA
GAAGCTCACTGCTCGATAGCTCGGGTCCTTGCTAACATTGCTCAGCGGAA
AGCTGGTTCAGATTGGTAAATAATCGCTGCCACTGCCTGCAGCCTAAACA
TTTGTGCTGACGAGTCTTAGAATATGCCTTGAACGCTGTTAACCAGGGTG
TAACTGCTCTGGGCATCAAAGGTATGACATAGCTCTGACCCGCTCGAGCT
AGCTTCGAATAGCTACTGATGACCAACCCTACTCAATAGCTACCAACGGA
ATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACC
TTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACG
CAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTT
TCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGAT
ATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTG
GTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGC
GTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCC
TAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTC
TGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCC
ATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACAC
CGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGA
AGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAAATTGGTGAG
TTTCACATCTGGCAGTTCCTGATAGCTGTCGTGCTGACGATTATAGGCAT
TGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAAGGAT
CGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGACTAT
CTCACCAACCTATGA
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Coding sequence (CDS) from alignment at MCQH01000170:416987..418051-

>ATCC10864_006989-T1 ID=ATCC10864_006989-T1|Name=ATCC10864_006989-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4200bp|location=Sequence derived from alignment at MCQH01000170:416987..418051- (Aspergillus niger ATCC 10864)
GCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAA
GGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGA
CTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAA
GAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCC
TGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTAC
CGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCG
CATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCC
GGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTC
AGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGA
GGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGA
CGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGT
GGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAG
CGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAG
ATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAG
ATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCA
GGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGG
CTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGG
TCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCG
GACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACC
AACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAAC
TCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCC
CGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCG
TGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAAC
GAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCA
AGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGA
TTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGG
GGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTAT
CTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACT
ATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACA
TTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCA
CATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTG
ATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACT
GCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTA
CTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCC
GATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTT
CAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGAC
TACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCA
TTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGC
ATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGC
CCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCC
CTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACT
CAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTG
GGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTG
AGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGC
GGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAA
GGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGA
AACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTT
CTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGA
AATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCA
TCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCT
CTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGC
TTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTG
AGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGACTACCAACGGA
ATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACC
TTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACG
CAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTT
TCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGAT
ATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTG
GTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGC
GTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCC
TAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTC
TGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCC
ATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACAC
CGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGA
AGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATAT
GCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGA
AAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGT
TCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGA
GGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGG
AGATTGAGGACTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTG
CAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCC
AAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGG
TCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTG
GCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAG
GACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACC
GTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTG
AATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCA
ACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGT
CGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGC
ACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTC
GAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTAT
CGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACG
CTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTC
AGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCA2ATCC10864_006989Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006989-T1ATCC10864_006989-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006989-T1.cdsATCC10864_006989-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006989-T1.exon5ATCC10864_006989-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006989-T1.exon4ATCC10864_006989-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006989-T1.exon3ATCC10864_006989-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006989-T1.exon2ATCC10864_006989-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006989-T1.exon1ATCC10864_006989-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000426
InterProIPR034644
InterProIPR001353
PFAMPF10584
InterProIPR023332
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteBUSCO:EOG092645G0
NoteMEROPS:MER0004996
ProductProbable proteasome subunit alpha type-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:416987..418051 -
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