You are here

Home

ATCC10864_007364-T1, ATCC10864_007364-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007364-T1
Unique NameATCC10864_007364-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:137589..139218+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007364-T1 ID=ATCC10864_007364-T1|Name=ATCC10864_007364-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1630bp|location=Sequence derived from alignment at MCQH01000184:137589..139218+ (Aspergillus niger ATCC 10864)
ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGAGTATTCATTCCCCCG
AGCCTTCAACTCGAAATTAGAGAATAATGTCACTAATAGTCCGTCTTCTT
TATCCTCAGGTGTCAACAGCTATGACTGGGGTAGGACATCCCCGCATCCT
GGATTGGTCCGCCCGTTGCGTTTGCTGAAGCTGGTCTAGGCAAGATTGGT
CATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTT
CTCCATAGAACCTGAGAAGCCGTATGCAGAGGTTCGCTCCCTGAATTCTT
GATGTTCTCATGGCGGTAAACTGACCCGGTGACGTATAGTTGTGGATGGG
CACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCC
TCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAG
CGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAA
GGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTC
ATGCCCGGGACGCCCGAAACTATCCAGGTAACCTATATAATTCTATCTGA
TAACAATCGCAACTCTGATCATCGCTTTATAGATGATAATCACAAACCCG
AAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCG
CTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTT
AGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTG
AAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGC
TCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGC
CACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTA
CTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCT
GCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATT
CGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGT
TCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAA
TGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTT
CAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAA
TTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAAT
GCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGAT
TGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAG
CAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGA
ACTGGGAAGATTATGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTA
TGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCA
GTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACG
GGCAAGGAGGACATGGTGAATGGAAACTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000184:137589..139218+

>ATCC10864_007364-T1 ID=ATCC10864_007364-T1|Name=ATCC10864_007364-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6900bp|location=Sequence derived from alignment at MCQH01000184:137589..139218+ (Aspergillus niger ATCC 10864)
ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGTCAACAGCTATGACTG
GGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTG
CAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGTTGTGG
ATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAAC
CCTCCTCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGA
GCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTT
CAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAA
GCTTCATGCCCGGGACGCCCGAAACTATCCAGATGATAATCACAAACCCG
AAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCG
CTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTT
AGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTG
AAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGC
TCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGC
CACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTA
CTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCT
GCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATT
CGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGT
TCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAA
TGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTT
CAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAA
TTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAAT
GCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGAT
TGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAG
CAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGA
ACTGGGAAGATTATGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTA
TGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCA
GTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACG
GGCAAGGAGGACATGGTGAATGGAAACTAGATGCAGGTACCGTTGCTTCG
CCTTCAGTGTGGTGTCAACAGCTATGACTGGGGCAAGATTGGTCATGAGT
CTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATA
GAACCTGAGAAGCCGTATGCAGAGTTGTGGATGGGCACCCATCCTTCCCT
TCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGG
ATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAA
TTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCA
AGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCC
GAAACTATCCAGATGATAATCACAAACCCGAAATGACAATTGCGATCACC
CCGTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTT
CCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGA
ATCAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGAC
AAAATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAAT
GAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTG
CGGCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAG
ACGAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAA
CGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATT
TTGTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATC
CATGCATACATCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAA
CGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCA
CCGAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAG
CCGACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGG
TTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCA
AGACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTG
GGTCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGATTATGGTCGG
CCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCA
ACGCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTT
ACCACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAA
TGGAAACTAGATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGTCAACA
GCTATGACTGGGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATGCC
GCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGC
AGAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAA
CCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGATCTCC
AAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGT
TCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAAC
TGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGATGATAAT
CACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGG
CTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTC
TCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTC
AAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGA
CGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCA
TTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGAT
ACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGC
CGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACA
TCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGT
GAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGA
CATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCA
CTCCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCTGACATACTCC
TATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGC
CGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACG
ACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCT
GGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATG
CACAGGCGGAACTGGGAAGATTATGGTCGGCCACAAGACTGAGGAAGTGA
AGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAA
AGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTG
TGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAGATGCAGGTAC
CGTTGCTTCGCCTTCAGTGTGGTGTCAACAGCTATGACTGGGGCAAGATT
GGTCATGAGTCTGCTGCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGA
TTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGTTGTGGATGGGCACCC
ATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGAT
ATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATA
TGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTC
TCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCC
CGGGACGCCCGAAACTATCCAGATGATAATCACAAACCCGAAATGACAAT
TGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAA
TCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACG
CAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCA
GGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGCTCCCTATTCA
CATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAG
CTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAG
CACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCTGCCATTATCG
CTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTC
TTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGC
TGATGACATCCATGCATACATCTCTGGAGACATTATCGAATGCATGGCGT
CGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTT
GATACACTCACCGAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCA
AAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAATGCCTCCGCCT
ACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTT
AGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGA
CGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGAACTGGGAAGA
TTATGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTT
GTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGA
GGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACGGGCAAGGAGG
ACATGGTGAATGGAAACTAGATGCAGGTACCGTTGCTTCGCCTTCAGTGT
GGTGTCAACAGCTATGACTGGGGCAAGATTGGTCATGAGTCTGCTGCCGC
AAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGA
AGCCGTATGCAGAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAA
GATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGC
ATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCC
TTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCG
AATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCC
AGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAG
GACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCA
GTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAATTCGA
GAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAA
GAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCA
CCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCTCAGGA
TTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGA
GCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTC
CCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTCAAGCT
GGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACA
TCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGG
GCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAAATGCT
GACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACT
ATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCT
CTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACGGATCT
GAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCA
TCCTGATATGCACAGGCGGAACTGGGAAGATTATGGTCGGCCACAAGACT
GAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCCGAGTG
TATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATA
AGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004476mannose-6-phosphate isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMI1ATCC10864_007364Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007364-T1ATCC10864_007364-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007364-T1.exon1ATCC10864_007364-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007364-T1.exon2ATCC10864_007364-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007364-T1.exon3ATCC10864_007364-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007364-T1.exon4ATCC10864_007364-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007364-T1.exon5ATCC10864_007364-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007364-T1.cdsATCC10864_007364-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014710
InterProIPR016305
InterProIPR001250
PFAMPF01238
InterProIPR011051
InterProIPR018050
Properties
Property NameValue
ProductMannose-6-phosphate isomerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:137589..139218 +
Powered by Drupal