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ATCC10864_007379-T1, ATCC10864_007379-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007379-T1
Unique NameATCC10864_007379-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:189639..190874+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007379-T1 ID=ATCC10864_007379-T1|Name=ATCC10864_007379-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1236bp|location=Sequence derived from alignment at MCQH01000184:189639..190874+ (Aspergillus niger ATCC 10864)
ATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTCAACC
TGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGAGCTA
GCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACACAGGC
CCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAA
TCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGT
CGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAG
CACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATG
GTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCA
TGCTTCATACTGCATCGTTACTGTAAGCTGTTTTCATCGTGCCTCGGTTT
AGTCTGGACACCTACCTGACCTATGGCGTATGAGCCAGGATCGATGATGT
CGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATAT
ACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCT
CTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGT
CCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGC
GAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGT
AACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGA
AAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGA
TTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACC
AAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCC
CATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTA
TTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGT
TACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGA
ATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAG
CAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATC
ACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAG
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Coding sequence (CDS) from alignment at MCQH01000184:189639..190874+

>ATCC10864_007379-T1 ID=ATCC10864_007379-T1|Name=ATCC10864_007379-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2340bp|location=Sequence derived from alignment at MCQH01000184:189639..190874+ (Aspergillus niger ATCC 10864)
ATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTCAACC
TGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGAGCTA
GCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACACAGGC
CCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAA
TCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGT
CGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAG
CACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATG
GTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCA
TGCTTCATACTGCATCGTTACTGATCGATGATGTCGAGGATAACTCTATT
TTGCGACGCGGTATTCCCGTAGCTCATAACATATACGGCACCGCGCAAAC
CATCAACTCTGCGAACTATGTATATTTCCTTGCTCTGCAAGAGGTGCAAA
AGTTGAACAACCCCGCTGCGATTGACATCTACGTCCAAGAGTTATTGAAC
CTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAGATACTCTGACTTG
CCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAACAAAACTGGGGGTT
TGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAGTAGCTCCGGAAAG
GACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTTTCCAAATCTGCGA
CGACTACCTCAACCTGTCCAACACTACGTACACCAAGAACAAAGGTCTTT
GTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCATCATTCATAGTATC
CGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTCTCAAGCAAAAGAC
GAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTACATGGAGAGCACTG
GCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATTGCGAGCCAAAGCA
CTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAGATGGACGCGAAGA
CGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACCGAGTCGACACTGG
GGGAGTGTGGTCCCCAGTAGATGTCTGCAGGGCCGTTTCCAGATTTCTCT
GCTAGCAGATCTTCTCAACCTGGATTATATTCCCTCACAGGCAATTCCAT
TGACGGCAAGGGCGGAGCTAGCCTAGGAAAGCCTGATCTCCTGGTGAGCC
CAGCCATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACG
AACCACTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAA
ATACAAGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGAC
CATACGATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTT
ATCAACGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAAT
CATCACAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGATCGATG
ATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAAC
ATATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCT
TGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCT
ACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTC
TGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGT
CGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGG
CTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGG
CTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTA
CACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCT
TTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTG
AGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGT
CAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCC
GAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGAC
CAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAA
GATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GGS1ATCC10864_007379Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007379-T1.exon1ATCC10864_007379-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007379-T1.exon2ATCC10864_007379-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007379-T1.cdsATCC10864_007379-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007379-T1ATCC10864_007379-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR033749
InterProIPR000092
InterProIPR008949
PFAMPF00348
Properties
Property NameValue
NoteSMCOG1182:Polyprenyl synthetase
NoteantiSMASH:Cluster_1000184.1
Productgeranylgeranyl diphosphate synthase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:189639..190874 +
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