You are here

Home

ATCC10864_007387-T1, ATCC10864_007387-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007387-T1
Unique NameATCC10864_007387-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:216314..217766+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007387-T1 ID=ATCC10864_007387-T1|Name=ATCC10864_007387-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1453bp|location=Sequence derived from alignment at MCQH01000184:216314..217766+ (Aspergillus niger ATCC 10864)
ATGGGCAAGACCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGA
CGGTAATTCGGACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAAT
ATTCCAAGGATATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAA
GCCTTCAAGGATAATGTTGAAGCAGGTAGGCACTTCATGGATCCACCTTC
TCTCGTCATGCTATATAACTACCCCTGAATCTTTTGGACACAAGAAATGC
ATACATATCTAACAAAGACATCGAACAACAGTCCGCAAAGCTAAGCAACT
AAGGACTATAAAAATTGTCTCTTACGACTGGCTGGAAGACTCTCTCTTAT
CTAAGAATCGGAGACCGAAGCGTGAGACGGAGTACCTTCTCGTGGATATA
CTGAAGAGTGAGAATAAGAAGAGGGGTAAAGAGAGAGACAAGATAAGGAA
AAAGGAGAAAGAAAAGCCTAGGAGAAAAGGTACGTTTGCTTCTCTTGGGG
CGAGTTGGTGATCGTTGGAGTTGGGTCCAACCGAGGAAGTGAATTCGGAC
GGACTTGACTACATATATCACCGTAATGACTGACATGTGCAACTAGGTAA
TCTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCGTAAAGGCCG
GCACTGCGGTGTGTATGTTATCGTCTATTCCCTCGTTCTGCGTGTTACGA
AGGCTGATTCAGGCTGGCGATCTAGCGAGATATCACATTTATACAGATCA
AGACGCAAGAGTGACGTACAATGCTACGCTTGTCCGGTCGATGCAGGGCA
AAAACTACAAGGAGAGATATGTGGTCAGGGTGAGTTAGTCTTCTTTGCAA
TGCTGTGAATTCGCTCTCGTTTTGTCTCTCCAGGCAGGTGGAGTATATGT
ATCACGAGAAGAAGGCTGATCGAGTAGCTGTATGTAGGTATACGAGTCTA
ATAAAGAACCCCATGTCTACGCTACACATCTCGAGTACAGTCGTATTGGC
AAGCAGCAGAGTCAACTCCTGACACCGCTGAAAGCAGATCAAGACTCCGC
AGTGAAGGCTTTCAAGAAGATTTTCAAGGACAAAACAGGTAAAGAGTGGG
AAGAGCGACTGAACGGTGTTTTACCCTCTGGTAAGAGGGATGCTGATGGC
AAATTACTGCTTCCTCACGAGAACTGGTTTTACTACGAGGATCGGGCTGG
GATGTTGTCAAATTTCCTTCGGGGAGTTATAGATGCACCCGACGGCGATG
GCTCGATGGTTGTCAAGCAAGAGCATCTAGATGCACCAATGCAAGGCATC
AAGCACGAGTCACCGCAGGATGCGAATGATGAGAGGCCAGGAAGCGACGA
GTCAATAATCGTATACGATTTGACTGGTTCGGACGTAGAGGTTCTGAACT
GTCCGCGAGACAAATATACCCGGTCGGCTAGCCCTAACTGTTTCCGAGGC
TAA
back to top

Coding sequence (CDS) from alignment at MCQH01000184:216314..217766+

>ATCC10864_007387-T1 ID=ATCC10864_007387-T1|Name=ATCC10864_007387-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3360bp|location=Sequence derived from alignment at MCQH01000184:216314..217766+ (Aspergillus niger ATCC 10864)
ATGGGCAAGACCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGA
CGGTAATTCGGACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAAT
ATTCCAAGGATATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAA
GCCTTCAAGGATAATGTTGAAGCAGGTAATCTGAAGAATCAGGACCCCTT
TGGCAGGAAGAGAAAGGGCGTAAAGGCCGGCACTGCGGTGTATCAAGACG
CAAGAGTGACGTACAATGCTACGCTTGTCCGGTCGATGCAGGGCAAAAAC
TACAAGGAGAGATATGTGGTCAGGGTATACGAGTCTAATAAAGAACCCCA
TGTCTACGCTACACATCTCGAGTACAGTCGTATTGGCAAGCAGCAGAGTC
AACTCCTGACACCGCTGAAAGCAGATCAAGACTCCGCAGTGAAGGCTTTC
AAGAAGATTTTCAAGGACAAAACAGGTAAAGAGTGGGAAGAGCGACTGAA
CGGTGTTTTACCCTCTGGTAAGAGGGATGCTGATGGCAAATTACTGCTTC
CTCACGAGAACTGGTTTTACTACGAGGATCGGGCTGGGATGTTGTCAAAT
TTCCTTCGGGGAGTTATAGATGCACCCGACGGCGATGGCTCGATGGTTGT
CAAGCAAGAGCATCTAGATGCACCAATGCAAGGCATCAAGCACGAGTCAC
CGCAGGATGCGAATGATGAGAGGCCAGGAAGCGACGAGTCAATAATCGTA
TACGATTTGACTGGTTCGGACGTAGAGGTTCTGAACTGTCCGCGAGACAA
ATATACCCGGTCGGCTAGCCCTAACTGTTTCCGAGGCTAAATGGGCAAGA
CCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGACGGTAATTCG
GACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAATATTCCAAGGA
TATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAAGCCTTCAAGG
ATAATGTTGAAGCAGGTAATCTGAAGAATCAGGACCCCTTTGGCAGGAAG
AGAAAGGGCGTAAAGGCCGGCACTGCGGTGTATCAAGACGCAAGAGTGAC
GTACAATGCTACGCTTGTCCGGTCGATGCAGGGCAAAAACTACAAGGAGA
GATATGTGGTCAGGGTATACGAGTCTAATAAAGAACCCCATGTCTACGCT
ACACATCTCGAGTACAGTCGTATTGGCAAGCAGCAGAGTCAACTCCTGAC
ACCGCTGAAAGCAGATCAAGACTCCGCAGTGAAGGCTTTCAAGAAGATTT
TCAAGGACAAAACAGGTAAAGAGTGGGAAGAGCGACTGAACGGTGTTTTA
CCCTCTGGTAAGAGGGATGCTGATGGCAAATTACTGCTTCCTCACGAGAA
CTGGTTTTACTACGAGGATCGGGCTGGGATGTTGTCAAATTTCCTTCGGG
GAGTTATAGATGCACCCGACGGCGATGGCTCGATGGTTGTCAAGCAAGAG
CATCTAGATGCACCAATGCAAGGCATCAAGCACGAGTCACCGCAGGATGC
GAATGATGAGAGGCCAGGAAGCGACGAGTCAATAATCGTATACGATTTGA
CTGGTTCGGACGTAGAGGTTCTGAACTGTCCGCGAGACAAATATACCCGG
TCGGCTAGCCCTAACTGTTTCCGAGGCTAAATGGGCAAGACCTTCAAAAA
AATATATGCCAGCTCATTTGGCAAATTCGACGGTAATTCGGACAAAATAC
CCCAATGGATACGGGCCAACGGAGGCCAATATTCCAAGGATATTAGCAAA
GAGATCACCCATCTGATTACCACCAAGGAAGCCTTCAAGGATAATGTTGA
AGCAGGTAATCTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCG
TAAAGGCCGGCACTGCGGTGTATCAAGACGCAAGAGTGACGTACAATGCT
ACGCTTGTCCGGTCGATGCAGGGCAAAAACTACAAGGAGAGATATGTGGT
CAGGGTATACGAGTCTAATAAAGAACCCCATGTCTACGCTACACATCTCG
AGTACAGTCGTATTGGCAAGCAGCAGAGTCAACTCCTGACACCGCTGAAA
GCAGATCAAGACTCCGCAGTGAAGGCTTTCAAGAAGATTTTCAAGGACAA
AACAGGTAAAGAGTGGGAAGAGCGACTGAACGGTGTTTTACCCTCTGGTA
AGAGGGATGCTGATGGCAAATTACTGCTTCCTCACGAGAACTGGTTTTAC
TACGAGGATCGGGCTGGGATGTTGTCAAATTTCCTTCGGGGAGTTATAGA
TGCACCCGACGGCGATGGCTCGATGGTTGTCAAGCAAGAGCATCTAGATG
CACCAATGCAAGGCATCAAGCACGAGTCACCGCAGGATGCGAATGATGAG
AGGCCAGGAAGCGACGAGTCAATAATCGTATACGATTTGACTGGTTCGGA
CGTAGAGGTTCTGAACTGTCCGCGAGACAAATATACCCGGTCGGCTAGCC
CTAACTGTTTCCGAGGCTAAATGGGCAAGACCTTCAAAAAAATATATGCC
AGCTCATTTGGCAAATTCGACGGTAATTCGGACAAAATACCCCAATGGAT
ACGGGCCAACGGAGGCCAATATTCCAAGGATATTAGCAAAGAGATCACCC
ATCTGATTACCACCAAGGAAGCCTTCAAGGATAATGTTGAAGCAGGTAAT
CTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCGTAAAGGCCGG
CACTGCGGTGTATCAAGACGCAAGAGTGACGTACAATGCTACGCTTGTCC
GGTCGATGCAGGGCAAAAACTACAAGGAGAGATATGTGGTCAGGGTATAC
GAGTCTAATAAAGAACCCCATGTCTACGCTACACATCTCGAGTACAGTCG
TATTGGCAAGCAGCAGAGTCAACTCCTGACACCGCTGAAAGCAGATCAAG
ACTCCGCAGTGAAGGCTTTCAAGAAGATTTTCAAGGACAAAACAGGTAAA
GAGTGGGAAGAGCGACTGAACGGTGTTTTACCCTCTGGTAAGAGGGATGC
TGATGGCAAATTACTGCTTCCTCACGAGAACTGGTTTTACTACGAGGATC
GGGCTGGGATGTTGTCAAATTTCCTTCGGGGAGTTATAGATGCACCCGAC
GGCGATGGCTCGATGGTTGTCAAGCAAGAGCATCTAGATGCACCAATGCA
AGGCATCAAGCACGAGTCACCGCAGGATGCGAATGATGAGAGGCCAGGAA
GCGACGAGTCAATAATCGTATACGATTTGACTGGTTCGGACGTAGAGGTT
CTGAACTGTCCGCGAGACAAATATACCCGGTCGGCTAGCCCTAACTGTTT
CCGAGGCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007387ATCC10864_007387Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007387-T1.exon1ATCC10864_007387-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007387-T1.exon2ATCC10864_007387-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007387-T1.exon3ATCC10864_007387-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007387-T1.exon4ATCC10864_007387-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007387-T1.cdsATCC10864_007387-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007387-T1ATCC10864_007387-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF05406
InterProIPR036930
InterProIPR008893
InterProIPR001357
PFAMPF12738
InterProIPR036420
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:216314..217766 +
Powered by Drupal