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ATCC10864_007398-T1, ATCC10864_007398-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007398-T1
Unique NameATCC10864_007398-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:247118..248537-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007398-T1 ID=ATCC10864_007398-T1|Name=ATCC10864_007398-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1420bp|location=Sequence derived from alignment at MCQH01000184:247118..248537- (Aspergillus niger ATCC 10864)
ATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGAT
CTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGG
CCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTC
TGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTT
CTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGTATGTGAGC
TCCCCTACTGCGGCGCCTCCCGGCCCTCCTGGTGCTGCATGTCTCCTTTC
CCGCCCGCTTCGGCAGTTCAATGATCCCCCACACCATTACGTTCCATGCT
AATGTATCCAACCCGCAAAGGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATTTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATGTATGTCCGGGTTCAAGCTACCCCCCAACTTCTACCTCCCGAGCC
ATGAAACTGACATGATGCGGTCTTGTATAGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACTT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACAGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAAATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTACGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAA
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Coding sequence (CDS) from alignment at MCQH01000184:247118..248537-

>ATCC10864_007398-T1 ID=ATCC10864_007398-T1|Name=ATCC10864_007398-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3645bp|location=Sequence derived from alignment at MCQH01000184:247118..248537- (Aspergillus niger ATCC 10864)
TCGAATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGAC
ATCCGCTCTGCATGGAACTTGGTCAACCCTTCTGCATCCCCGACCATCAA
CAAAGACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGG
GCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAG
AACAACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATG
GGGCGCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCG
GAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACA
CCCAAGGGAACAGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAA
GGTCCGGTTGAGGCGCGAGCTGGCGGAAATGGAGTCTAAGCTGGATTCCG
CTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGG
CCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAA
GGAGCGGGAGCTACGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACG
GCCAGAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAG
GTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGA
TCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAAGAATTACAAG
CAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCAT
TTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCG
GATAGAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGT
ACATGAACCCGTCTGATAAGTCTAAATATGAAGAAATTTATCTCGCGAAC
AAAAACCGCCGCGGGGAAATCTCATATGTCAACCAAGAAGATCGAGCAGT
GGGAAATCGAACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAG
CCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCT
TCGTGATGACCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCG
ATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTC
GACCTTGTGAACGGGTCGAATCATTACAGCCTCTTTACGACTCTCTCGAC
GTCCCGGACACGGACATCCGCTCTGCATGGAACTTGGTCAACCCTTCTGC
ATCCCCGACCATCAACAAAGACGCTACCCTTGCATTTCTGCATATGCTCA
ACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTG
CGCGCTTCATTCGAGAACAACCATATTGACTACCAAGTCGACAATGCCCG
TCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGGAGACCCTCACAGGCC
GGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGA
AAGACCTCCTATACACCCAAGGGAACAGATTTCAGCGACACCATCCAGGA
TGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGCTGGCGGAAATGGAGT
CTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCT
CGAAACGACGGTCGGCCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCA
GCTGCTGGAGTACAAGGAGCGGGAGCTACGGGAGCTGCGTGAAGGCGCAG
GCCGATCCAAAGACGGCCAGAACGTAGAACGTCTCAGAGATGATGTCAAG
ACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAA
GGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCC
GATAAGAATTACAAGCAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCC
GAATCCAAAGCTCATTTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCC
GGAGCAGTTCGAGCGGATAGAAGACGAGGACGATACTCCCGGCCTGAAAG
ATGGGTTTGAATGGTACATGAACCCGTCTGATAAGTCTAAATATGAAGAA
ATTTATCTCGCGAACAAAAACCGCCGCGGGGAAATCTCATATGTCAACCA
AGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGATCTTCGCATCG
CTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACT
CAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTCTGGGACCTGG
CAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCC
ATGCGATTGGTGTTCGACCTTGTGAACGGGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACTT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACAGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAAATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTACGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAAGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATTTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGG
GAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCA
AGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAA
AGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAG
GAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
END3ATCC10864_007398Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007398-T1ATCC10864_007398-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007398-T1.cdsATCC10864_007398-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007398-T1.exon3ATCC10864_007398-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007398-T1.exon2ATCC10864_007398-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007398-T1.exon1ATCC10864_007398-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12761
InterProIPR018247
InterProIPR002048
InterProIPR000261
InterProIPR011992
PFAMPF12763
PFAMPF00036
InterProIPR025604
Properties
Property NameValue
Productendocytosis defective- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:247118..248537 -
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