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ATCC10864_007419-T1, ATCC10864_007419-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007419-T1
Unique NameATCC10864_007419-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:309439..311018-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007419-T1 ID=ATCC10864_007419-T1|Name=ATCC10864_007419-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1580bp|location=Sequence derived from alignment at MCQH01000184:309439..311018- (Aspergillus niger ATCC 10864)
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGTAATCTACC
GACCGCTTTCCTCGACAACATGGCCTGGAAGGAATCTCGATCTAACTGCA
CTTTTAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGT
TCAAGGGTCAGAAGGATACTGATGTATGTCGCGTCCCGGGCAACGCCTGA
AACATTTTTTTGCTTCCATCCTTTGGTCCGGTAGCTTCCGCCGCAACCTG
CGACAACGGCCTGTATTCGACAGCTCTTCCGAAGGATGGATCATTTCTGA
ATGGCGTTGTTGACATTATGTGTCCTGATAGGGAAAATACACTGTTACTC
TGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGAT
ATCTTCGCTGCCGCAAACGTACGCCTCCCGCTACTTCCGATCGCCTCTAG
TATACAAATCAGCGATGCTAAATTACCTGTGTGCAGGCCCCTATCAAGTG
GGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCC
CCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGT
CCTCTTGCTGTATGTCCATGCTTCCTAGACTGTTTTGCGATAAGTCTTTC
TCTAAACGCTTTGTCACATAGACCCCCGTCGGCAAGGGACACGTCTCTCT
GAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCT
GCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTC
CTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGT
CGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCG
AGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAG
AAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCT
CTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGT
TCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCC
ACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACAT
TCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCT
CCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCC
GCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCT
GAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTC
GTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGTAAGCTAG
CATTTTATCAAAGTGACGGTACCATTGCGAGACACGATGCTAACAATTGC
GATTTTAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAG
TATGCTGAGGCCATCATGAAGCGTCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000184:309439..311018-

>ATCC10864_007419-T1 ID=ATCC10864_007419-T1|Name=ATCC10864_007419-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6948bp|location=Sequence derived from alignment at MCQH01000184:309439..311018- (Aspergillus niger ATCC 10864)
GCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGA
GGCCATCATGAAGCGTCTGTAAACCCCCGTCGGCAAGGGACACGTCTCTC
TGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCC
TGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGT
CCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCG
TCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCC
GAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAA
GAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTC
TCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAG
TTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCC
CACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACA
TTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCC
TCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTC
CGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTC
TGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACT
CGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCCTAT
CAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCG
CCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTC
AAGGGTCCTCTTGCTGGAAAATACACTGTTACTCTGATCGAGGGTGATGG
TATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAA
ACCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAG
GGTCAGAAGGATACTGATATGATTGCCGCCAGGAACTTTGTCGCTCCCGC
CCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCT
TCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAG
TATGCTGAGGCCATCATGAAGCGTCTGTAAACCCCCGTCGGCAAGGGACA
CGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACG
TCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTC
GACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGA
GCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGG
AGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATC
AACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTC
CGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCG
ACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTT
ACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTA
TGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTC
TGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTC
CACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGC
TCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGC
ACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAG
GCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGG
CAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACG
TTGCGCTCAAGGGTCCTCTTGCTGGAAAATACACTGTTACTCTGATCGAG
GGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGC
TGCCGCAAACCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTA
AGTTCAAGGGTCAGAAGGATACTGATATGATTGCCGCCAGGAACTTTGTC
GCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGC
CTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGA
CCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAACCCCCGTCGGC
AAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTT
CGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACG
ACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCC
GGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCAT
CACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTC
GTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATG
AAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGA
GTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGA
AGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCC
AACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGG
TCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCG
AGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAAC
CCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCT
GAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCG
AAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTG
AAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAA
GAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGAAAATACACTGTTACTC
TGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGAT
ATCTTCGCTGCCGCAAACCTCCGCACTTACTCCGCCGCTGCCGATGAGCG
CGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATATGATTGCCGCCAGGA
ACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCT
CGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTC
CGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAACCC
CCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTC
AACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGAC
CCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTG
AATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATC
AAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCA
GTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCA
CCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATT
GCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTC
GTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTG
TCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTG
ATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTC
CATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTC
TTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCAC
ATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACAC
CCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTC
CCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGC
GTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGAAAATACAC
TGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGG
TGAAGGATATCTTCGCTGCCGCAAACCTCCGCACTTACTCCGCCGCTGCC
GATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATATGATTGC
CGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTG
TGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTG
GGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCT
GTAAACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTC
GTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGT
TACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACAC
CGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCC
AGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTC
GCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCA
CAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTC
GTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTG
GACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAA
GGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCG
CCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGAC
GAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGG
CAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGC
TTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACT
TTCGACACCCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGA
TGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCA
TCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGA
AAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTC
CCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACCTCCGCACTTACTCCG
CCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGAT
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCG
GTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATG
AAGCGTCTGTAAACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGAC
CCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCG
TTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGT
GAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGG
TGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGC
TCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGT
GTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAA
CCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTG
AGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTAC
AACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGA
TATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACA
TTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGAC
ATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTAT
CATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGA
AGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAG
CCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGA
CGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTC
TTGCTGGAAAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCC
GAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACCTCCGCAC
TTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGG
ATACTGATATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGC
TTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0000287magnesium ion binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH2ATCC10864_007419Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007419-T1ATCC10864_007419-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007419-T1.cdsATCC10864_007419-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007419-T1.exon6ATCC10864_007419-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_007419-T1.exon5ATCC10864_007419-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_007419-T1.exon4ATCC10864_007419-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007419-T1.exon3ATCC10864_007419-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007419-T1.exon2ATCC10864_007419-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007419-T1.exon1ATCC10864_007419-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004434
PFAMPF00180
InterProIPR024084
InterProIPR019818
Properties
Property NameValue
ProductNAD-dependent isocitrate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:309439..311018 -
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