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ATCC10864_007440-T1, ATCC10864_007440-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007440-T1
Unique NameATCC10864_007440-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:363979..365229-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007440-T1 ID=ATCC10864_007440-T1|Name=ATCC10864_007440-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1251bp|location=Sequence derived from alignment at MCQH01000184:363979..365229- (Aspergillus niger ATCC 10864)
ATGGCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGAT
TTCAAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCT
TGGACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGG
CGTGCAAAGGTAGGCATGCTGTTTGCTCTGAGAATTGGAGGGCTGTTCGC
ACAGTTGAAAGTCGGCTACGAGGCAGTTGAACAATGGCCCTCGTGCCATT
AAGTGCCTGTTCCGTCATTGCTTGCCGACGTGGCTAACTGTCGTCGCAAC
AGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAAACCC
CCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTTTAGA
GATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAATAGCC
CTACCCGAAGTATGCCTATCCCAAGCTTCTTCCGCCGAGCTTCATCCGTG
AATTGGCTAATGTATCCAAGGGAGACTCATCCTCATTGACGCCATCAACC
CGCTTCTACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTT
CTAAGCTCCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGT
GTCGCTCGTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCT
CGCCCTACGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACA
ATCATCACACTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACG
CGATCGGAGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATG
GTGTGCTCCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAG
GGGATTGTACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTT
GGAATGGTACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGA
AGGAGATTGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAG
GAGCCGGACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATT
GCGCCTTACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGT
ACTTCGATGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTA
TACGACATGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTA
G
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Coding sequence (CDS) from alignment at MCQH01000184:363979..365229-

>ATCC10864_007440-T1 ID=ATCC10864_007440-T1|Name=ATCC10864_007440-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3141bp|location=Sequence derived from alignment at MCQH01000184:363979..365229- (Aspergillus niger ATCC 10864)
GGAGACTCATCCTCATTGACGCCATCAACCCGCTTCTACACTCGAAAAAG
AATGATCCTCAGTTCCATGTATCACAATTTCTAAGCTCCTTCCTGATTCC
ACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTCGTGGTAAACTTTC
ATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTACGCACCCTCGCCC
CTCTCAATGCTGACATACCTCGCTACTACAATCATCACACTCCATTCATT
CTCGCATATTCTCGCGCAGAAAGCGGCACGCGATCGGAGTTTGGCCGCGC
CTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCTCCTTGGCCGACTG
GACAGACCGAGTGGTCAAGACTCATCAGAGGGGATTGTACTCGAGCTGGA
GCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGGTACTTCCTTCCTC
CTGCGTCTCGTTACCCTCCCCAATACGTGAAGGAGATTGTGACGTTGCTG
GACGACCATCCCTTGTACCGCCCGCCGCAGGAGCCGGACGCTGGTGCAGG
CGAAGAAGAGCCCGAATCAACATTCGAATTGCGCCTTACGGAAAGACAGA
GACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGATGCCCAGCAGGGC
GACGGTCCTGGTGAAGGAGGACGCATCTTATACGACATGGGAGAAGAGGA
CGATTTTGACGAAGAGGAAGATGAAATCTAGCTTTCCAGGACCCATGTAA
CCCTCCTTGCCTTTGAAACATTGAAACCCCCGGAGGGCGTCGATGCATTC
ATTCCCGCTCGCCGGAAGAGTCCTTTAGAGATCCTGAAAGCAGTTGGCGC
TGCTTACCAAAATGTCTCATCGAATAGCCCTACCCGAAATGGCGCCCGCA
AGCACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTCAAAGCTTCT
TAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGGACTCACTAG
AGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGTGCAAAGGGA
GACTCATCCTCATTGACGCCATCAACCCGCTTCTACACTCGAAAAAGAAT
GATCCTCAGTTCCATGTATCACAATTTCTAAGCTCCTTCCTGATTCCACC
GAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTCGTGGTAAACTTTCATC
AGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTACGCACCCTCGCCCCTC
TCAATGCTGACATACCTCGCTACTACAATCATCACACTCCATTCATTCTC
GCATATTCTCGCGCAGAAAGCGGCACGCGATCGGAGTTTGGCCGCGCCTG
TCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCTCCTTGGCCGACTGGAC
AGACCGAGTGGTCAAGACTCATCAGAGGGGATTGTACTCGAGCTGGAGCA
CCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGGTACTTCCTTCCTCCTG
CGTCTCGTTACCCTCCCCAATACGTGAAGGAGATTGTGACGTTGCTGGAC
GACCATCCCTTGTACCGCCCGCCGCAGGAGCCGGACGCTGGTGCAGGCGA
AGAAGAGCCCGAATCAACATTCGAATTGCGCCTTACGGAAAGACAGAGAC
GAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGATGCCCAGCAGGGCGAC
GGTCCTGGTGAAGGAGGACGCATCTTATACGACATGGGAGAAGAGGACGA
TTTTGACGAAGAGGAAGATGAAATCTAGCTTTCCAGGACCCATGTAACCC
TCCTTGCCTTTGAAACATTGAAACCCCCGGAGGGCGTCGATGCATTCATT
CCCGCTCGCCGGAAGAGTCCTTTAGAGATCCTGAAAGCAGTTGGCGCTGC
TTACCAAAATGTCTCATCGAATAGCCCTACCCGAAATGGCGCCCGCAAGC
ACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTCAAAGCTTCTTAG
CCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGGACTCACTAGAGC
AGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGTGCAAAGGGAGAC
TCATCCTCATTGACGCCATCAACCCGCTTCTACACTCGAAAAAGAATGAT
CCTCAGTTCCATGTATCACAATTTCTAAGCTCCTTCCTGATTCCACCGAA
TCCCACAGCTCCGAAGGTGGAGGTGTCGCTCGTGGTAAACTTTCATCAGG
ATGTTCCCAGCCCACCTGCTCTCTCGCCCTACGCACCCTCGCCCCTCTCA
ATGCTGACATACCTCGCTACTACAATCATCACACTCCATTCATTCTCGCA
TATTCTCGCGCAGAAAGCGGCACGCGATCGGAGTTTGGCCGCGCCTGTCT
TTGGTCTTGAAGAAGAGCAGGATGGTGTGCTCCTTGGCCGACTGGACAGA
CCGAGTGGTCAAGACTCATCAGAGGGGATTGTACTCGAGCTGGAGCACCG
CAGAAAGAGTGGTCGCGGCGTCTTGGAATGGTACTTCCTTCCTCCTGCGT
CTCGTTACCCTCCCCAATACGTGAAGGAGATTGTGACGTTGCTGGACGAC
CATCCCTTGTACCGCCCGCCGCAGGAGCCGGACGCTGGTGCAGGCGAAGA
AGAGCCCGAATCAACATTCGAATTGCGCCTTACGGAAAGACAGAGACGAG
AGCGAGAGGGTGTGGTGCTGCCGTACTTCGATGCCCAGCAGGGCGACGGT
CCTGGTGAAGGAGGACGCATCTTATACGACATGGGAGAAGAGGACGATTT
TGACGAAGAGGAAGATGAAATCTAGCTTTCCAGGACCCATGTAACCCTCC
TTGCCTTTGAAACATTGAAACCCCCGGAGGGCGTCGATGCATTCATTCCC
GCTCGCCGGAAGAGTCCTTTAGAGATCCTGAAAGCAGTTGGCGCTGCTTA
CCAAAATGTCTCATCGAATAGCCCTACCCGAAATGGCGCCCGCAAGCACT
TCTCACCGACAGACGCATAATCTGCTCTTGATTTCAAAGCTTCTTAGCCT
GAGAGATACCGCATCACCGCTTACCTTGGTCTTGGACTCACTAGAGCAGC
CCGCGACCCCATTGACCAAAGAATACATTCGGCGTGCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007440ATCC10864_007440Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007440-T1ATCC10864_007440-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007440-T1.cdsATCC10864_007440-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007440-T1.exon3ATCC10864_007440-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007440-T1.exon2ATCC10864_007440-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007440-T1.exon1ATCC10864_007440-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019519
PFAMPF10483
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:363979..365229 -
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