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ATCC10864_007449-T1, ATCC10864_007449-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007449-T1
Unique NameATCC10864_007449-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:386074..387211+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007449-T1 ID=ATCC10864_007449-T1|Name=ATCC10864_007449-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1138bp|location=Sequence derived from alignment at MCQH01000184:386074..387211+ (Aspergillus niger ATCC 10864)
ATGTCGTCCGACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGC
CTATAAGCTCAAGTAAGTTTCTATCTCGATCTCTATCCGCGCATAAAAAA
AATTTCCGCCTACCACATACATACAGCACAACAAGAACCGACAAAGAAGA
GAGAGAATATAATCCACAAGTATATAAATAAAAAGCTAACCATAATTTGT
TTTTGAAAAGAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACAAC
GTTAGCGGACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGGTA
TGCCACGATCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACATGA
AGACGGTGGAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATACGA
CTGTCGTCGAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTGAT
CTACTGGCCGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCGGC
TGACGCAGGTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGAGG
CTGGGTGAGAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGAGA
GGAGGCCAGGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGCAA
TTGAGAGGGAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATCGG
CCGTTGAATGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTGGA
GAGGAGCGGAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGAGA
TTGAGTTTGAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTGAG
TATGTTAGTGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAGGA
TTGGATTGGTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGAGA
GTGATGAGGATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACTCT
GATGAGGAGGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCTGC
TCCCCAGATTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTATG
AGACTGAGGGTGCTGGCAAGGAGAGCATCCTGGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000184:386074..387211+

>ATCC10864_007449-T1 ID=ATCC10864_007449-T1|Name=ATCC10864_007449-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1980bp|location=Sequence derived from alignment at MCQH01000184:386074..387211+ (Aspergillus niger ATCC 10864)
ATGTCGTCCGACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGC
CTATAAGCTCAAAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACA
ACGTTAGCGGACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGG
TATGCCACGATCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACAT
GAAGACGGTGGAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATAC
GACTGTCGTCGAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTG
ATCTACTGGCCGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCG
GCTGACGCAGGTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGA
GGCTGGGTGAGAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGA
GAGGAGGCCAGGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGC
AATTGAGAGGGAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATC
GGCCGTTGAATGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTG
GAGAGGAGCGGAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGA
GATTGAGTTTGAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTG
AGTATGTTAGTGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAG
GATTGGATTGGTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGA
GAGTGATGAGGATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACT
CTGATGAGGAGGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCT
GCTCCCCAGATTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTA
TGAGACTGAGGGTGCTGGCAAGGAGAGCATCCTGGCTTGAATGTCGTCCG
ACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGCCTATAAGCTC
AAAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACAACGTTAGCGG
ACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGGTATGCCACGA
TCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACATGAAGACGGTG
GAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATACGACTGTCGTC
GAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTGATCTACTGGC
CGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCGGCTGACGCAG
GTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGAGGCTGGGTGA
GAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGAGAGGAGGCCA
GGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGCAATTGAGAGG
GAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATCGGCCGTTGAA
TGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTGGAGAGGAGCG
GAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGAGATTGAGTTT
GAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTGAGTATGTTAG
TGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAGGATTGGATTG
GTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGAGAGTGATGAG
GATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACTCTGATGAGGA
GGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCTGCTCCCCAGA
TTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTATGAGACTGAG
GGTGCTGGCAAGGAGAGCATCCTGGCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007449ATCC10864_007449Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007449-T1.exon1ATCC10864_007449-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007449-T1.exon2ATCC10864_007449-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007449-T1.cdsATCC10864_007449-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007449-T1ATCC10864_007449-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04874
InterProIPR029004
InterProIPR006958
PFAMPF01778
Properties
Property NameValue
NoteBUSCO:EOG09264L3W
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:386074..387211 +
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