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ATCC10864_007475-T1, ATCC10864_007475-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007475-T1
Unique NameATCC10864_007475-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:462394..464095+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007475-T1 ID=ATCC10864_007475-T1|Name=ATCC10864_007475-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1702bp|location=Sequence derived from alignment at MCQH01000184:462394..464095+ (Aspergillus niger ATCC 10864)
ATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTA
CGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTACAATGTGA
ACTCGGACTTGGCGGTACGAGGGTTCTCCCATGTTTTGATTGACTTTCTT
CTGTGTGCGATGGACTAATTGAAGACATCCTGACTTTTAGTATGACACCG
CCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAG
TTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGT
GCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCA
ACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGAC
TGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAAT
CCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACA
TTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATC
AAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAA
GGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCG
TTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACC
CAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAA
CACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCG
TGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTC
CTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAA
GTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGT
TCAAGGTCTCCTACCCGGGTAAGTCTAGCATCAGACGTCAGTATGGAGGG
AATACTAACAGTTGCCATGATAGCCGAGTTCCACTCCCAGACCGCGATCG
AGGCCGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCC
GCCGACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCATTCGTAT
CATCGACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGTGACCACT
GTGTTCAGGTAGGTCCTGCCGTATCCAAAATTTGAGTGTCATGCACCACG
CATACTGACAACCGCGCCAGTACATGGTTGCGACCATGTTGGTCTTCAAC
CGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTACTTCTCA
GCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGATCCCCAGT
TCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAACGCCCTT
ACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGC
ACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGG
CCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCGCATTGAC
CAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCTACGACGT
TGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCAGCTCAGT
AG
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Coding sequence (CDS) from alignment at MCQH01000184:462394..464095+

>ATCC10864_007475-T1 ID=ATCC10864_007475-T1|Name=ATCC10864_007475-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6036bp|location=Sequence derived from alignment at MCQH01000184:462394..464095+ (Aspergillus niger ATCC 10864)
ATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGATAAGCCGTA
CGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACTACAATGTGA
ACTCGGACTTGGCGTATGACACCGCCCGTTTGGTGTTCCTCGACACTCTG
GGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTCCAAGCTCCTGGG
CCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTCGCGTTCCTGGAA
CGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAACATTGGCGCTATG
ATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGCTGAATGGGGTCA
CCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCGACTGGGTTTCTC
GCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAGATCTTCAAGGTC
AAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGATTCAGGGTGTGTT
GGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACCACGTCGTTCTCG
TCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTCGGCCTTAGCGAG
AAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGACGGACAGTCTCT
CCGTACCTACAGACACTCCCCCAACACCATGTCGAGGAAGTCCTGGGCTG
CGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTGAAGGTGCAGAAG
GGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGTTTGGGGTTTCTA
TGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGCGCCCCTACGGTA
GTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTACCCGGCCGAGTTC
CACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTAACGTGAAGCTCAA
GGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATCAGAAACCGCACCC
ACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAAGGCGATGGACAAC
TTCGCCGATCGTGACCACTGTGTTCAGTACATGGTTGCGACCATGTTGGT
CTTCAACCGGTTGACTGCCAACGACTACGCCGACGGATCGGAGGCTGCTA
CTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGTGTCGAGGAT
CCCCAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCACCATCCCCAA
CGCCCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATGAGGTGGTTG
TCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCCAAGCCGGAG
ATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGACCAGGCCCG
CATTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTCTTGAGGGCT
ACGACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAGATGGTGGCA
GCTCAGTAGATGTCTCCCCTTCAACATGCTGCTCCCGTCGTTCCCGGCGA
TAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATATCCACAACT
ACAATGTGAACTCGGACTTGGCGTATGACACCGCCCGTTTGGTGTTCCTC
GACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGAATGCTCCAA
GCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACGGAACTCGCG
TTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGCGCTTTCAACATT
GGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTGGTTGGCTGCTGA
ATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTGCTGTCGCCGACT
GGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCCAACGGCAAGATC
TTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCACGAGATTCA
GGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCTTGGACCACG
TCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAGATGCTCGGC
CTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGCATTCGTGGACGG
ACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCATGTCGAGGAAGT
CCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTCGTCTTGAAG
GTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGCTCCCGTTTG
GGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGTTCCAGCGCC
CCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTCTCCTACCCG
GCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGATGGTTAACGT
GAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGGAGATCAGAA
ACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAGTTCAAGGCG
ATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTACATGGTTGCGAC
CATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACGCCGACGGATCGG
AGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAGCGCATTTACTGT
GTCGAGGATCCCCAGTTCACTAAGGATTACCACGACCCTGCGAAGCGCAC
CATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAACGGTGCTGGATG
AGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGGCGTGAGGAGGCC
AAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCAGGCGCACTTTGA
CCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGGACCAGGCCGCTC
TTGAGGGCTACGACGTTGACCAGTACGTCGACTTGTATGTCAAGGACCAG
ATGGTGGCAGCTCAGTAGATGTCTCCCCTTCAACATGCTGCTCCCGTCGT
TCCCGGCGATAAGCCGTACGACCCAGAGATCAAGGATATGGCCGACTATA
TCCACAACTACAATGTGAACTCGGACTTGGCGTATGACACCGCCCGTTTG
GTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAAGTTCAAGGA
ATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGGTGCCCAACG
GAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTCAACGGCGCT
TTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGACTGCTGGTT
GGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAATCCTTGCTG
TCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAACATTGCCAAC
GGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGATCAAGGCGCA
CGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACAAGGTCGGCT
TGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTCGTTGCAAAG
ATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTACCCAAGCATT
CGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCAACACCATGT
CGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCCGTGAACCTC
GTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGTCCTGTCTGC
TCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACAAGTTCCAGT
TCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTGTTCAAGGTC
TCCTACCCGGCCGAGTTCCACTCCCAGACCGCGATCGAGGCCGCTGAGAT
GGTTAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCGACATTAAGG
AGATCAGAAACCGCACCCACGAGGCGTGCATTCGTATCATCGACAAGCAG
TTCAAGGCGATGGACAACTTCGCCGATCGTGACCACTGTGTTCAGTACAT
GGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACGACTACGCCG
ACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTGCGCAAGCGC
ATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCACGACCCTGC
GAAGCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATGACGGAACGG
TGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGCCTGCGGCGT
GAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCATCTGCAGGC
GCACTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTGGCTGGGACC
AGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGACTTGTATGTC
AAGGACCAGATGGTGGCAGCTCAGTAGATGTCTCCCCTTCAACATGCTGC
TCCCGTCGTTCCCGGCGATAAGCCGTACGACCCAGAGATCAAGGATATGG
CCGACTATATCCACAACTACAATGTGAACTCGGACTTGGCGTATGACACC
GCCCGTTTGGTGTTCCTCGACACTCTGGGGTGCGGTTTGGAGGCATTGAA
GTTCAAGGAATGCTCCAAGCTCCTGGGCCCGGTGGTGGACGGCACCGTGG
TGCCCAACGGAACTCGCGTTCCTGGAACGCCCTACCAGCTGGACCCTGTC
AACGGCGCTTTCAACATTGGCGCTATGATCCGCTGGCTGGACTACAACGA
CTGCTGGTTGGCTGCTGAATGGGGTCACCCCTCGGACAACCTGGGTGGAA
TCCTTGCTGTCGCCGACTGGGTTTCTCGCACAAACCGTGCGGGCGGAAAC
ATTGCCAACGGCAAGATCTTCAAGGTCAAGGACGTCCTGGAGGCCATGAT
CAAGGCGCACGAGATTCAGGGTGTGTTGGCGCTGGAGAACTCCTTCAACA
AGGTCGGCTTGGACCACGTCGTTCTCGTCAAGGTTGCTACCACTGCTGTC
GTTGCAAAGATGCTCGGCCTTAGCGAGAAGCAGACCGCAGATGCGATTAC
CCAAGCATTCGTGGACGGACAGTCTCTCCGTACCTACAGACACTCCCCCA
ACACCATGTCGAGGAAGTCCTGGGCTGCGGGTGACGCATGCCAGCGGGCC
GTGAACCTCGTCTTGAAGGTGCAGAAGGGCGAGGGTGGCCTGCACACCGT
CCTGTCTGCTCCCGTTTGGGGTTTCTATGATGTCCTGTTCAAGGGCAACA
AGTTCCAGTTCCAGCGCCCCTACGGTAGTTATGTCATGGAGAATGTTCTG
TTCAAGGTCTCCTACCCGGCCGAGTTCCACTCCCAGACCGCGATCGAGGC
CGCTGAGATGGTTAACGTGAAGCTCAAGGCTCTCGGAAAGACTGCCGCCG
ACATTAAGGAGATCAGAAACCGCACCCACGAGGCGTGCATTCGTATCATC
GACAAGCAGTTCAAGGCGATGGACAACTTCGCCGATCGTGACCACTGTGT
TCAGTACATGGTTGCGACCATGTTGGTCTTCAACCGGTTGACTGCCAACG
ACTACGCCGACGGATCGGAGGCTGCTACTTCTCAGCTCCTGGAAGACCTG
CGCAAGCGCATTTACTGTGTCGAGGATCCCCAGTTCACTAAGGATTACCA
CGACCCTGCGAAGCGCACCATCCCCAACGCCCTTACCGTTACTCTGAATG
ACGGAACGGTGCTGGATGAGGTGGTTGTCGAGGCACCCTTGGGCCACCGC
CTGCGGCGTGAGGAGGCCAAGCCGGAGATTCTGGCCAAGTACAAGCGTCA
TCTGCAGGCGCACTTTGACCAGGCCCGCATTGACCAGCTGATTCAGGTTG
GCTGGGACCAGGCCGCTCTTGAGGGCTACGACGTTGACCAGTACGTCGAC
TTGTATGTCAAGGACCAGATGGTGGCAGCTCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019679propionate metabolic process, methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDH1ATCC10864_007475Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007475-T1.exon1ATCC10864_007475-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007475-T1.exon2ATCC10864_007475-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007475-T1.exon3ATCC10864_007475-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007475-T1.exon4ATCC10864_007475-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007475-T1.cdsATCC10864_007475-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007475-T1ATCC10864_007475-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03972
InterProIPR042188
InterProIPR005656
InterProIPR036148
InterProIPR012705
PFAMPF19305
InterProIPR042183
Properties
Property NameValue
ProductATP-binding cassette transporter CGR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:462394..464095 +
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