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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000184:626161..627450- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_007536-T1 ID=ATCC10864_007536-T1|Name=ATCC10864_007536-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1290bp|location=Sequence derived from alignment at MCQH01000184:626161..627450- (Aspergillus niger ATCC 10864)
ATGGCTGCTGCTGCTAGGACGCTTCGCATAGGTCAATTGCTCCTCTCCAT
CTCTTAACGTTCTTCTCCTGCCCGTCTAGTTGCTGACATCTTCTCTCGTG
CAGGTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCATTCCGGTGAGT
CACCACCAGCAAATAGCTTCCTGTCGAAACACCAATTCTAACGAAACGCT
CTTCATCAGGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAA
CCTCAAGTTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACCTTCAAGC
GCACCGGTAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAG
TGCGATGGTGCTCTGTTCGGCGCTGTCAGGTGAGTGCTACATCGATATCT
CCTGTCCTTGTCTGTCACTGAATTCCCTCCTAACTAATCTCTGTAGCTCC
CCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCCGTAA
GAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCCGGCA
GCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGTGAGAACACCGAG
GATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCAAGGT
TGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATCTCCA
CCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGTTGCT
GGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCATCACCCACAAGTC
CAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGTAAGG
CCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGATCGTC
GACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATACTACGACGTCAT
TGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATGGTGCTGCTGCCC
TGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGGCTTC
GCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCAAGGG
TATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTGGAGT
TCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGATGCC
AACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGGCTAC
TACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGTAA back to topCoding sequence (CDS) from alignment at MCQH01000184:626161..627450- >ATCC10864_007536-T1 ID=ATCC10864_007536-T1|Name=ATCC10864_007536-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4344bp|location=Sequence derived from alignment at MCQH01000184:626161..627450- (Aspergillus niger ATCC 10864)
CTCCCCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCC
GTAAGAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCC
GGCAGCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGTGAGAACAC
CGAGGATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCA
AGGTTGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATC
TCCACCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGT
TGCTGGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCATCACCCACA
AGTCCAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGT
AAGGCCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGAT
CGTCGACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATACTACGACG
TCATTGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATGGTGCTGCT
GCCCTGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGG
CTTCGCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCA
AGGGTATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTG
GAGTTCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGA
TGCCAACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGG
CTACTACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGTAAGCCGGC
CGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAACCTCAAGTTCAGCTT
CGTCGATCTCGATGCGGGCTTCGACACCTTCAAGCGCACCGGTAGCGCTC
TCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAGTGCGATGGTGCTCTG
TTCGGCGCTGTCAGGTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCA
TTCCGATGGCTGCTGCTGCTAGGACGCTTCGCATAGCTCCCCTAGCACCA
AGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCCGTAAGAAGCTTGAC
CTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCCGGCAGCACCGACGG
CAAGCCCATTGACCTGGTGATTGTTCGTGAGAACACCGAGGATCTCTACG
TCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCAAGGTTGCCGAGGCT
ATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATCTCCACCATTGCCGG
TGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGTTGCTGGTATCGCTG
GCCTCCGCACCGAACCCATGGTGACCATCACCCACAAGTCCAACGTTCTC
TCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGTAAGGCCCTTTCCGC
CGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGATCGTCGACTCCATGG
TTTACAAGCTCTTCCGTCAGCCCGAATACTACGACGTCATTGTCGCCCCC
AACTTGTACGGTGATATCCTGTCGGATGGTGCTGCTGCCCTGGTTGGTAG
TCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGGCTTCGCCATCGGTG
AGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCAAGGGTATTGCCAAC
CCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTGGAGTTCTTGGGTGA
GGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGATGCCAACCTTGATG
AGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGGCTACTACCCAGGAG
GTTTTGGATGATGTCCTGAAGAGGCTGTAAGCCGGCCGGAAGGTTTTGGA
GTCTCTCCCCTCCTCTCTGAACCTCAAGTTCAGCTTCGTCGATCTCGATG
CGGGCTTCGACACCTTCAAGCGCACCGGTAGCGCTCTCCCCGATAAGACA
GTCGAGATCCTCAAGAAGGAGTGCGATGGTGCTCTGTTCGGCGCTGTCAG
GTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCATTCCGATGGCTGCT
GCTGCTAGGACGCTTCGCATAGCTCCCCTAGCACCAAGGTCGCCGGCTAC
TCCTCTCCCATCGTCGCCCTCCGTAAGAAGCTTGACCTGTACGCCAACGT
CCGCCCCGTCAAGACCACCGCCGGCAGCACCGACGGCAAGCCCATTGACC
TGGTGATTGTTCGTGAGAACACCGAGGATCTCTACGTCAAGGAAGAGCAG
ACCAAGGAGACCCCCAATGGCAAGGTTGCCGAGGCTATCAAGCGTATCTC
CGAGAACGCTTCCTCCCGCATCTCCACCATTGCCGGTGAAATTGCCCTCC
GTCGCCAGAAGATCCGCAGCGTTGCTGGTATCGCTGGCCTCCGCACCGAA
CCCATGGTGACCATCACCCACAAGTCCAACGTTCTCTCTCAGACCGACGG
TCTCTTCCGTGAGACCGCCCGTAAGGCCCTTTCCGCCGACCGCTTCTCCT
CTGTCCAGGTTGAGGAGCAGATCGTCGACTCCATGGTTTACAAGCTCTTC
CGTCAGCCCGAATACTACGACGTCATTGTCGCCCCCAACTTGTACGGTGA
TATCCTGTCGGATGGTGCTGCTGCCCTGGTTGGTAGTCTGGGACTGGTTC
CTAGCGCTAACGTTGGTGATGGCTTCGCCATCGGTGAGCCCTGCCACGGC
AGTGCCCCCGACATTGAGGGCAAGGGTATTGCCAACCCCATCGCCACTCT
GCGCAGTGTTGCCCTGATGCTGGAGTTCTTGGGTGAGGAGACTGCCGCTG
CCAAGATCTACACTGCTGTTGATGCCAACCTTGATGAGGCCAAGTTCCTT
TCTCCTGACATGGGCGGTAAGGCTACTACCCAGGAGGTTTTGGATGATGT
CCTGAAGAGGCTGTAAGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCT
CTCTGAACCTCAAGTTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACC
TTCAAGCGCACCGGTAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAA
GAAGGAGTGCGATGGTGCTCTGTTCGGCGCTGTCAGGTCTCATCCCCGGT
GACGGCATCGGCCGAGAGGTCATTCCGATGGCTGCTGCTGCTAGGACGCT
TCGCATAGCTCCCCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGT
CGCCCTCCGTAAGAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGA
CCACCGCCGGCAGCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGT
GAGAACACCGAGGATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCC
CAATGGCAAGGTTGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCT
CCCGCATCTCCACCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATC
CGCAGCGTTGCTGGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCAT
CACCCACAAGTCCAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGA
CCGCCCGTAAGGCCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAG
GAGCAGATCGTCGACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATA
CTACGACGTCATTGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATG
GTGCTGCTGCCCTGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTT
GGTGATGGCTTCGCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACAT
TGAGGGCAAGGGTATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCC
TGATGCTGGAGTTCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACT
GCTGTTGATGCCAACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGG
CGGTAAGGCTACTACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGT
AAGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAACCTCAAG
TTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACCTTCAAGCGCACCGG
TAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAGTGCGATG
GTGCTCTGTTCGGCGCTGTCAGGTCTCATCCCCGGTGACGGCATCGGCCG
AGAGGTCATTCCGATGGCTGCTGCTGCTAGGACGCTTCGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051287 | NAD binding |
| GO:0000287 | magnesium ion binding |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00180 |
| InterPro | IPR024084 |
| InterPro | IPR019818 |
Properties
| Property Name | Value |
|---|
| Product | homoisocitrate dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000184 | supercontig | MCQH01000184:626161..627450 - |
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