You are here

Home

ATCC10864_007546-T1, ATCC10864_007546-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007546-T1
Unique NameATCC10864_007546-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:646753..648056-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007546-T1 ID=ATCC10864_007546-T1|Name=ATCC10864_007546-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1304bp|location=Sequence derived from alignment at MCQH01000184:646753..648056- (Aspergillus niger ATCC 10864)
ATGACATCGACTGACTCGGGTCCTGGCAGGTCACGGCGGAGATCGAGATT
CGGGTGCCGCAATTGCAAGCTCCGGAAACTCAAGGTGGGTGCCCCTAGCA
CCTCGTAGATAAACCATCTCCACTGATCCATATCAAGTAGTGCGACGAAA
GCAAACCACAATGCAAGCGATGTAGTTCATTCGGGATAGTATGCAACTTC
CTATCGACTACCACCCCGGACCTCCACCCCATTGCCGCTGACACGCGACG
GTCATGGATGGTTCGAGGTGCTGCAGCAGCAGCAGGACCGCAGCCCCCTC
TCACCAATGCCGTCTGGACATCAGACGCATCGACCTTCTATCAACTGAAT
ACCAGATGTCAAGACTTTATCACCCGGTACCTAGGACGCAGTCTCATCAC
CCCTGATGATCCAAACATGGGACATGTGAATCGCAAGCTCCTAGAACTGG
CCTTTACTGTAAGTTGACCATTCCCTCATAAGCTCCAATCTTGGATACTG
ATCACCACATTGTAGCATCCCTACTTAATGCACGCCTCCCTAGCAGTATC
ACTTACCTACGACCGCCATCTGAACAGCCCACCAAAAAGCCACCGCACCC
TAGAAGAATGCTACCACTGGTCACAAAGCACCATCCTTTTCAACAAGAAG
CTCCGCGAACAAATAGACCCCAAAGACAGAGACCCAATCTGGGGTACTGC
AGCCGCGTTGGTAATCCTAACCTTCTCATCCCCTAACGCACGCACTCCGG
AAGAATCTTGGCCTTTGAACCCCTCTCCTTCTTCCCATCTGGACTGGGTG
TATATGAATAAGGGCAAAATGTCCTTGTGGAATATAGTCAACCCGCTGCG
ATCGGATAGTATCTTTCATGTCATGGCGGGGACGTTCGCCTATGTGCATT
CGCCGTTGCCTGAAGGAGGTACAGAGGGTATACCGCCGGCTTTGGCGGCG
CTGTGTGGTATCACGGAGGATTCTACGGCTAAAACGAACCCGTATTTCCA
AGCTGCTCATGCGGTAGCGCAGATCTTGGAGGTTGAGGATAGTGAAGTTA
CGATGGGCCCGGTGCAAATGTTTATGCGGTGTATTCATGGTCGGTTTGAG
GGGTTGCTGAGAGAGAGGGATCCTGTGGCGTTGGTGTTGCTGTATCTGTG
GTATCGCAAGGCTGGGCGTTGTATTTGGTGGATTGGACTTAGGGCTCGAG
TGGAATGTCCTGCTATTCGGTTGTATTTGCAGCGATATCATGGGGGAAAT
GGGGCAGTGTTGGGGTTGCTTCCAGAGTGTGGTCTTGGGGATAGGTGGGA
CTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000184:646753..648056-

>ATCC10864_007546-T1 ID=ATCC10864_007546-T1|Name=ATCC10864_007546-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3573bp|location=Sequence derived from alignment at MCQH01000184:646753..648056- (Aspergillus niger ATCC 10864)
CATCCCTACTTAATGCACGCCTCCCTAGCAGTATCACTTACCTACGACCG
CCATCTGAACAGCCCACCAAAAAGCCACCGCACCCTAGAAGAATGCTACC
ACTGGTCACAAAGCACCATCCTTTTCAACAAGAAGCTCCGCGAACAAATA
GACCCCAAAGACAGAGACCCAATCTGGGGTACTGCAGCCGCGTTGGTAAT
CCTAACCTTCTCATCCCCTAACGCACGCACTCCGGAAGAATCTTGGCCTT
TGAACCCCTCTCCTTCTTCCCATCTGGACTGGGTGTATATGAATAAGGGC
AAAATGTCCTTGTGGAATATAGTCAACCCGCTGCGATCGGATAGTATCTT
TCATGTCATGGCGGGGACGTTCGCCTATGTGCATTCGCCGTTGCCTGAAG
GAGGTACAGAGGGTATACCGCCGGCTTTGGCGGCGCTGTGTGGTATCACG
GAGGATTCTACGGCTAAAACGAACCCGTATTTCCAAGCTGCTCATGCGGT
AGCGCAGATCTTGGAGGTTGAGGATAGTGAAGTTACGATGGGCCCGGTGC
AAATGTTTATGCGGTGTATTCATGGTCGGTTTGAGGGGTTGCTGAGAGAG
AGGGATCCTGTGGCGTTGGTGTTGCTGTATCTGTGGTATCGCAAGGCTGG
GCGTTGTATTTGGTGGATTGGACTTAGGGCTCGAGTGGAATGTCCTGCTA
TTCGGTTGTATTTGCAGCGATATCATGGGGGAAATGGGGCAGTGTTGGGG
TTGCTTCCAGAGTGTGGTCTTGGGGATAGGTGGGACTAGTGCGACGAAAG
CAAACCACAATGCAAGCGATGTAGTTCATTCGGGATAGTATGCAACTTCC
TATCGACTACCACCCCGGACCTCCACCCCATTGCCGCTGACACGCGACGG
TCATGGATGGTTCGAGGTGCTGCAGCAGCAGCAGGACCGCAGCCCCCTCT
CACCAATGCCGTCTGGACATCAGACGCATCGACCTTCTATCAACTGAATA
CCAGATGTCAAGACTTTATCACCCGGTACCTAGGACGCAGTCTCATCACC
CCTGATGATCCAAACATGGGACATGTGAATCGCAAGCTCCTAGAACTGGC
CTTTACTATGACATCGACTGACTCGGGTCCTGGCAGGTCACGGCGGAGAT
CGAGATTCGGGTGCCGCAATTGCAAGCTCCGGAAACTCAAGCATCCCTAC
TTAATGCACGCCTCCCTAGCAGTATCACTTACCTACGACCGCCATCTGAA
CAGCCCACCAAAAAGCCACCGCACCCTAGAAGAATGCTACCACTGGTCAC
AAAGCACCATCCTTTTCAACAAGAAGCTCCGCGAACAAATAGACCCCAAA
GACAGAGACCCAATCTGGGGTACTGCAGCCGCGTTGGTAATCCTAACCTT
CTCATCCCCTAACGCACGCACTCCGGAAGAATCTTGGCCTTTGAACCCCT
CTCCTTCTTCCCATCTGGACTGGGTGTATATGAATAAGGGCAAAATGTCC
TTGTGGAATATAGTCAACCCGCTGCGATCGGATAGTATCTTTCATGTCAT
GGCGGGGACGTTCGCCTATGTGCATTCGCCGTTGCCTGAAGGAGGTACAG
AGGGTATACCGCCGGCTTTGGCGGCGCTGTGTGGTATCACGGAGGATTCT
ACGGCTAAAACGAACCCGTATTTCCAAGCTGCTCATGCGGTAGCGCAGAT
CTTGGAGGTTGAGGATAGTGAAGTTACGATGGGCCCGGTGCAAATGTTTA
TGCGGTGTATTCATGGTCGGTTTGAGGGGTTGCTGAGAGAGAGGGATCCT
GTGGCGTTGGTGTTGCTGTATCTGTGGTATCGCAAGGCTGGGCGTTGTAT
TTGGTGGATTGGACTTAGGGCTCGAGTGGAATGTCCTGCTATTCGGTTGT
ATTTGCAGCGATATCATGGGGGAAATGGGGCAGTGTTGGGGTTGCTTCCA
GAGTGTGGTCTTGGGGATAGGTGGGACTAGTGCGACGAAAGCAAACCACA
ATGCAAGCGATGTAGTTCATTCGGGATAGTATGCAACTTCCTATCGACTA
CCACCCCGGACCTCCACCCCATTGCCGCTGACACGCGACGGTCATGGATG
GTTCGAGGTGCTGCAGCAGCAGCAGGACCGCAGCCCCCTCTCACCAATGC
CGTCTGGACATCAGACGCATCGACCTTCTATCAACTGAATACCAGATGTC
AAGACTTTATCACCCGGTACCTAGGACGCAGTCTCATCACCCCTGATGAT
CCAAACATGGGACATGTGAATCGCAAGCTCCTAGAACTGGCCTTTACTAT
GACATCGACTGACTCGGGTCCTGGCAGGTCACGGCGGAGATCGAGATTCG
GGTGCCGCAATTGCAAGCTCCGGAAACTCAAGCATCCCTACTTAATGCAC
GCCTCCCTAGCAGTATCACTTACCTACGACCGCCATCTGAACAGCCCACC
AAAAAGCCACCGCACCCTAGAAGAATGCTACCACTGGTCACAAAGCACCA
TCCTTTTCAACAAGAAGCTCCGCGAACAAATAGACCCCAAAGACAGAGAC
CCAATCTGGGGTACTGCAGCCGCGTTGGTAATCCTAACCTTCTCATCCCC
TAACGCACGCACTCCGGAAGAATCTTGGCCTTTGAACCCCTCTCCTTCTT
CCCATCTGGACTGGGTGTATATGAATAAGGGCAAAATGTCCTTGTGGAAT
ATAGTCAACCCGCTGCGATCGGATAGTATCTTTCATGTCATGGCGGGGAC
GTTCGCCTATGTGCATTCGCCGTTGCCTGAAGGAGGTACAGAGGGTATAC
CGCCGGCTTTGGCGGCGCTGTGTGGTATCACGGAGGATTCTACGGCTAAA
ACGAACCCGTATTTCCAAGCTGCTCATGCGGTAGCGCAGATCTTGGAGGT
TGAGGATAGTGAAGTTACGATGGGCCCGGTGCAAATGTTTATGCGGTGTA
TTCATGGTCGGTTTGAGGGGTTGCTGAGAGAGAGGGATCCTGTGGCGTTG
GTGTTGCTGTATCTGTGGTATCGCAAGGCTGGGCGTTGTATTTGGTGGAT
TGGACTTAGGGCTCGAGTGGAATGTCCTGCTATTCGGTTGTATTTGCAGC
GATATCATGGGGGAAATGGGGCAGTGTTGGGGTTGCTTCCAGAGTGTGGT
CTTGGGGATAGGTGGGACTAGTGCGACGAAAGCAAACCACAATGCAAGCG
ATGTAGTTCATTCGGGATAGTATGCAACTTCCTATCGACTACCACCCCGG
ACCTCCACCCCATTGCCGCTGACACGCGACGGTCATGGATGGTTCGAGGT
GCTGCAGCAGCAGCAGGACCGCAGCCCCCTCTCACCAATGCCGTCTGGAC
ATCAGACGCATCGACCTTCTATCAACTGAATACCAGATGTCAAGACTTTA
TCACCCGGTACCTAGGACGCAGTCTCATCACCCCTGATGATCCAAACATG
GGACATGTGAATCGCAAGCTCCTAGAACTGGCCTTTACTATGACATCGAC
TGACTCGGGTCCTGGCAGGTCACGGCGGAGATCGAGATTCGGGTGCCGCA
ATTGCAAGCTCCGGAAACTCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007546ATCC10864_007546Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007546-T1ATCC10864_007546-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007546-T1.cdsATCC10864_007546-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007546-T1.exon3ATCC10864_007546-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007546-T1.exon2ATCC10864_007546-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007546-T1.exon1ATCC10864_007546-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:646753..648056 -
Powered by Drupal