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ATCC10864_007755-T1, ATCC10864_007755-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007755-T1
Unique NameATCC10864_007755-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:1245414..1246554-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007755-T1 ID=ATCC10864_007755-T1|Name=ATCC10864_007755-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1141bp|location=Sequence derived from alignment at MCQH01000184:1245414..1246554- (Aspergillus niger ATCC 10864)
ATGCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGCCGGCGCCAC
CTTCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCACGTTCACCA
CCGCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACTATCACCCTT
AACAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGACCGGTCTCAC
CAGCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCCAGTACGAAG
AATGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATCACCGTCACT
GGTGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTGGTGGGATGG
CAAGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACGCCCATGGCC
TTGACTCCTCGTCTATTACTGGATTAAACATCAAAAACACTCCCCTTATG
GCGTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGTTACCATCAA
TAATGCGGATGGCGACACCCAGGGTGGACACAACACTGATGCGTTCGATG
TTGGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTCCATAACCAG
GATGACTGTCTTGCGATTAACTCTGGCGAGGTAAGCAGCTCTACATATAT
GCTTGATTCGGAATTATATTGATATTCTGTAGAACATCTGGTTCACCGGC
GGCACCTGCATTGGCGGCCACGGTCTCTCCATCGGCTCTGTCGGCGACCG
CTCCAACAACGTCGTCAAGAACGTCACCATCGAACACTCCACCGTGAGCA
ATTCCGAAAACGCCGTCCGAATCAAGACCATCTCTGGCGCCACTGGCTCC
GTGTCTGAGATTACATACTCCAACATCGTCATGTCCGGCATCTCCGATTA
CGGCGTGGTCATTCAGCAGGATTACGAAGACGGCAAGCCTACGGGTAAGC
CGACGAACGGTGTCACTATTCAGGATGTCAAGCTGGAGAGCGTGACCGGT
AGCGTGGATAGTAAGGCTACTGAGATCTATCTTCTTTGCGGGTCTGGTAG
CTGCTCGGACTGGACCTGGGACGATGTGAAGGTTACTGGGGGGAAGAAGT
CCACCGCTTGCAAGAACTTCCCTTCGGTGGCCTCTTGCTAG
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Coding sequence (CDS) from alignment at MCQH01000184:1245414..1246554-

>ATCC10864_007755-T1 ID=ATCC10864_007755-T1|Name=ATCC10864_007755-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2178bp|location=Sequence derived from alignment at MCQH01000184:1245414..1246554- (Aspergillus niger ATCC 10864)
AACATCTGGTTCACCGGCGGCACCTGCATTGGCGGCCACGGTCTCTCCAT
CGGCTCTGTCGGCGACCGCTCCAACAACGTCGTCAAGAACGTCACCATCG
AACACTCCACCGTGAGCAATTCCGAAAACGCCGTCCGAATCAAGACCATC
TCTGGCGCCACTGGCTCCGTGTCTGAGATTACATACTCCAACATCGTCAT
GTCCGGCATCTCCGATTACGGCGTGGTCATTCAGCAGGATTACGAAGACG
GCAAGCCTACGGGTAAGCCGACGAACGGTGTCACTATTCAGGATGTCAAG
CTGGAGAGCGTGACCGGTAGCGTGGATAGTAAGGCTACTGAGATCTATCT
TCTTTGCGGGTCTGGTAGCTGCTCGGACTGGACCTGGGACGATGTGAAGG
TTACTGGGGGGAAGAAGTCCACCGCTTGCAAGAACTTCCCTTCGGTGGCC
TCTTGCTAGATGCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGC
CGGCGCCACCTTCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCA
CGTTCACCACCGCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACT
ATCACCCTTAACAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGAC
CGGTCTCACCAGCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCC
AGTACGAAGAATGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATC
ACCGTCACTGGTGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTG
GTGGGATGGCAAGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACG
CCCATGGCCTTGACTCCTCGTCTATTACTGGATTAAACATCAAAAACACT
CCCCTTATGGCGTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGT
TACCATCAATAATGCGGATGGCGACACCCAGGGTGGACACAACACTGATG
CGTTCGATGTTGGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTC
CATAACCAGGATGACTGTCTTGCGATTAACTCTGGCGAGAACATCTGGTT
CACCGGCGGCACCTGCATTGGCGGCCACGGTCTCTCCATCGGCTCTGTCG
GCGACCGCTCCAACAACGTCGTCAAGAACGTCACCATCGAACACTCCACC
GTGAGCAATTCCGAAAACGCCGTCCGAATCAAGACCATCTCTGGCGCCAC
TGGCTCCGTGTCTGAGATTACATACTCCAACATCGTCATGTCCGGCATCT
CCGATTACGGCGTGGTCATTCAGCAGGATTACGAAGACGGCAAGCCTACG
GGTAAGCCGACGAACGGTGTCACTATTCAGGATGTCAAGCTGGAGAGCGT
GACCGGTAGCGTGGATAGTAAGGCTACTGAGATCTATCTTCTTTGCGGGT
CTGGTAGCTGCTCGGACTGGACCTGGGACGATGTGAAGGTTACTGGGGGG
AAGAAGTCCACCGCTTGCAAGAACTTCCCTTCGGTGGCCTCTTGCTAGAT
GCACTCGTTTGCTTCTCTTCTCGCCTACGGCCTGGTCGCCGGCGCCACCT
TCGCTTCTGCCTCTCCTATCGAAGCTCGAGACAGCTGCACGTTCACCACC
GCTGCCGCTGCTAAAGCGGGCAAGGCGAAATGCTCTACTATCACCCTTAA
CAACATCGAAGTTCCAGCTGGAACCACCCTCGACCTGACCGGTCTCACCA
GCGGTACCAAGGTCATCTTCGAGGGCACCACGACCTTCCAGTACGAAGAA
TGGGCAGGCCCCTTGATCTCCATGAGTGGCGAACATATCACCGTCACTGG
TGCCTCCGGCCACCTCATCAATTGCGATGGTGCGCGCTGGTGGGATGGCA
AGGGAACCAGCGGAAAGAAGAAGCCCAAGTTCTTTTACGCCCATGGCCTT
GACTCCTCGTCTATTACTGGATTAAACATCAAAAACACTCCCCTTATGGC
GTTTAGTGTCCAGGCGAATGACATTACGTTTACCGATGTTACCATCAATA
ATGCGGATGGCGACACCCAGGGTGGACACAACACTGATGCGTTCGATGTT
GGTAACTCGGTCGGGGTGAATATCATTAAGCCTTGGGTCCATAACCAGGA
TGACTGTCTTGCGATTAACTCTGGCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007755ATCC10864_007755Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007755-T1ATCC10864_007755-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007755-T1.cdsATCC10864_007755-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007755-T1.exon2ATCC10864_007755-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007755-T1.exon1ATCC10864_007755-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-21)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:1245414..1246554 -
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