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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000184:1396752..1397771+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_007809-T1 ID=ATCC10864_007809-T1|Name=ATCC10864_007809-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1020bp|location=Sequence derived from alignment at MCQH01000184:1396752..1397771+ (Aspergillus niger ATCC 10864) ATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTCAC
GAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACATGG
TCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCTAC
TTCAGTCAACGTAAGATAACATAGTATATATCCTAAATCGGTGAGCATCC
GAGCTCACCAGACCAACAGAACTCATCAAATTGGGGAAACGGATGTCTAC
TCGACAACAAGCACTTGCGACAGCGCAAGTCTATGTCAAGAGGTTCTACA
CCAAGAACGAGATTAGACATACAAACCCGTATCTTGTCGTCACAACTGCC
TTCTATCTGGCCTGTAAAATGGAAGAATGCCCTCAACATATTCGTTTTGT
CGTCGGAGAGGCTAGAGGTCTCTGGCCAGGTACGGAACACTCGCGTTAAT
GCACTTCGTGCGCTTCCCGCTGACGTGGCTACAGAGTTTATTGCCCCAGA
TGTTTCAAAACTAGGAGAATGCGAATTCTCTTTGATATCGGAAATGAACT
CTCAGCTTATTGTGCACCACCCATATCGAACTTTATCAGAACTCCAACCC
GAGCTGTCACTTACGTCAGATGAAGTTGCTCTTGCATGGTCTGTAATCAA
CGACCACTATCTCACCGACTTGCCGCTCTTATATCCGCCTCACGTCATCG
CTGTCATGGCGATTATCGTCGCCGTGGTCTTCAAGCCCAGCCAAACGAGC
TTTCACGGGTCAGCAGCGCCACTGGCCAGCGCGATGCGCGATGGGGGGAT
GAACATCCTTGGAGCATTGGGAGATAAGGGCGGCAACGGCCCTCCTCCCC
GCATTCAACGACTTATAGGATGGCTTGCCGAGAGCGAGGTGGACATCAAG
GCAGTCATAGAGTGTACTCAAGAGCTGGTGTCGCTTTACGAGGTCTGGGA
GCAATACAGCGAAAAGCATTGCAAGGAGCTTCTTGGACGGATGGTGAAGA
GCAAGAACCTGGACAAATGA back to topCoding sequence (CDS) from alignment at MCQH01000184:1396752..1397771+ >ATCC10864_007809-T1 ID=ATCC10864_007809-T1|Name=ATCC10864_007809-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2718bp|location=Sequence derived from alignment at MCQH01000184:1396752..1397771+ (Aspergillus niger ATCC 10864) ATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTCAC GAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACATGG TCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCTAC TTCAGTCAACAACTCATCAAATTGGGGAAACGGATGTCTACTCGACAACA AGCACTTGCGACAGCGCAAGTCTATGTCAAGAGGTTCTACACCAAGAACG AGATTAGACATACAAACCCGTATCTTGTCGTCACAACTGCCTTCTATCTG GCCTGTAAAATGGAAGAATGCCCTCAACATATTCGTTTTGTCGTCGGAGA GGCTAGAGGTCTCTGGCCAGAGTTTATTGCCCCAGATGTTTCAAAACTAG GAGAATGCGAATTCTCTTTGATATCGGAAATGAACTCTCAGCTTATTGTG CACCACCCATATCGAACTTTATCAGAACTCCAACCCGAGCTGTCACTTAC GTCAGATGAAGTTGCTCTTGCATGGTCTGTAATCAACGACCACTATCTCA CCGACTTGCCGCTCTTATATCCGCCTCACGTCATCGCTGTCATGGCGATT ATCGTCGCCGTGGTCTTCAAGCCCAGCCAAACGAGCTTTCACGGGTCAGC AGCGCCACTGGCCAGCGCGATGCGCGATGGGGGGATGAACATCCTTGGAG CATTGGGAGATAAGGGCGGCAACGGCCCTCCTCCCCGCATTCAACGACTT ATAGGATGGCTTGCCGAGAGCGAGGTGGACATCAAGGCAGTCATAGAGTG TACTCAAGAGCTGGTGTCGCTTTACGAGGTCTGGGAGCAATACAGCGAAA AGCATTGCAAGGAGCTTCTTGGACGGATGGTGAAGAGCAAGAACCTGGAC AAATGAATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCT CTTCACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGG ACATGGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAAC ATCTACTTCAGTCAACAACTCATCAAATTGGGGAAACGGATGTCTACTCG ACAACAAGCACTTGCGACAGCGCAAGTCTATGTCAAGAGGTTCTACACCA AGAACGAGATTAGACATACAAACCCGTATCTTGTCGTCACAACTGCCTTC TATCTGGCCTGTAAAATGGAAGAATGCCCTCAACATATTCGTTTTGTCGT CGGAGAGGCTAGAGGTCTCTGGCCAGAGTTTATTGCCCCAGATGTTTCAA AACTAGGAGAATGCGAATTCTCTTTGATATCGGAAATGAACTCTCAGCTT ATTGTGCACCACCCATATCGAACTTTATCAGAACTCCAACCCGAGCTGTC ACTTACGTCAGATGAAGTTGCTCTTGCATGGTCTGTAATCAACGACCACT ATCTCACCGACTTGCCGCTCTTATATCCGCCTCACGTCATCGCTGTCATG GCGATTATCGTCGCCGTGGTCTTCAAGCCCAGCCAAACGAGCTTTCACGG GTCAGCAGCGCCACTGGCCAGCGCGATGCGCGATGGGGGGATGAACATCC TTGGAGCATTGGGAGATAAGGGCGGCAACGGCCCTCCTCCCCGCATTCAA CGACTTATAGGATGGCTTGCCGAGAGCGAGGTGGACATCAAGGCAGTCAT AGAGTGTACTCAAGAGCTGGTGTCGCTTTACGAGGTCTGGGAGCAATACA GCGAAAAGCATTGCAAGGAGCTTCTTGGACGGATGGTGAAGAGCAAGAAC CTGGACAAATGAATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACA CTGGCTCTTCACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAG AGCGGGACATGGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTG CTGAACATCTACTTCAGTCAACAACTCATCAAATTGGGGAAACGGATGTC TACTCGACAACAAGCACTTGCGACAGCGCAAGTCTATGTCAAGAGGTTCT ACACCAAGAACGAGATTAGACATACAAACCCGTATCTTGTCGTCACAACT GCCTTCTATCTGGCCTGTAAAATGGAAGAATGCCCTCAACATATTCGTTT TGTCGTCGGAGAGGCTAGAGGTCTCTGGCCAGAGTTTATTGCCCCAGATG TTTCAAAACTAGGAGAATGCGAATTCTCTTTGATATCGGAAATGAACTCT CAGCTTATTGTGCACCACCCATATCGAACTTTATCAGAACTCCAACCCGA GCTGTCACTTACGTCAGATGAAGTTGCTCTTGCATGGTCTGTAATCAACG ACCACTATCTCACCGACTTGCCGCTCTTATATCCGCCTCACGTCATCGCT GTCATGGCGATTATCGTCGCCGTGGTCTTCAAGCCCAGCCAAACGAGCTT TCACGGGTCAGCAGCGCCACTGGCCAGCGCGATGCGCGATGGGGGGATGA ACATCCTTGGAGCATTGGGAGATAAGGGCGGCAACGGCCCTCCTCCCCGC ATTCAACGACTTATAGGATGGCTTGCCGAGAGCGAGGTGGACATCAAGGC AGTCATAGAGTGTACTCAAGAGCTGGTGTCGCTTTACGAGGTCTGGGAGC AATACAGCGAAAAGCATTGCAAGGAGCTTCTTGGACGGATGGTGAAGAGC AAGAACCTGGACAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Cellular Component
Term | Definition |
GO:0016592 | mediator complex |
Vocabulary: Molecular Function
Term | Definition |
GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Database | Accession |
InterPro | IPR013763 |
PFAM | PF00134 |
InterPro | IPR036915 |
InterPro | IPR028367 |
InterPro | IPR043198 |
InterPro | IPR006671 |
Properties
Property Name | Value |
Note | BUSCO:EOG09262K8C |
Product | RNA polymerase II holoenzyme cyclin-like subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
MCQH01000184 | supercontig | MCQH01000184:1396752..1397771 + |
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