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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000188:11669..12766+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_007844-T1 ID=ATCC10864_007844-T1|Name=ATCC10864_007844-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1098bp|location=Sequence derived from alignment at MCQH01000188:11669..12766+ (Aspergillus niger ATCC 10864)
ATGGCTTCTACATCTCCTCCCGCTGTCCGATCCAAAATTGACTTGCTCAT
AACCAACCTCGTCAACATCCAAGACAAAACCGGTCAATTTCTCCTCCCCC
TCGCTGATGGCCGCATTATCGACACCAAGTCCTGGCATGGCTGGGAATGG
ACGCATGGAATCGGCCTCTATGGCATCTGGAAGTACTACGAAATGACCGG
CTCTCCGCATCTCCTGCAAATTATCGAGGATTGGTTCGCCGCCCGCTTCG
CTGAAGGCGGTACCACTAAGAACATCAACACCATGGCCGTCTTCCTTACT
CTGGCATACGTATACGAGAAGACGCAAAACCCTGTCTACCTGCCCTGGCT
GGACGCATGGGCCGAATGGGCCATGCATGAACTCCCACGCACCAAGCAGG
GAGGCATGCAGCACGCCACATACCTCACGGAAAATTACCAGCAGTTGTGG
GATGATACGTTGATGATGACCGTGATGCCGTTGGCAAAAATTGGAAAGTT
GCTGAATCGGCCGGATTATGTGGAGGAGGCCAAGCGTCAGACGTTGGTGC
ACGTCAAGTACTTGGTGGATACGAGCACCGGGCTGTGGTTTCATGGCTGG
ACGTTCGAGGATGGTGGACATAACTTTGCTAGAGCGAGGTGGGCACGCGG
TAATAGTTGGGTGACTATGGTTATCCCAGAGTTTGTTGAGTTGTTGGATT
TGAAGGAGGGGGATCCTATTCGCCTGTTCTTGTTGGATACGTTAGAGGCC
CAATGCGAGGCTCTCATGGGCCTGCAGGAGGAATCGGGCTTTTGGCACAC
CCTGCTTGACCATCCTGATTCATATGTCGAGGCCTCCGCCACAGCAGGCT
TCGCATATGGTATCCTTAAGGCTGTTAGGAAGAGGTATCTGCCAAAGAAG
TATCGGGTAGTCGCAGAGAAGGCCATTCAGGCAGTGTTGAGCGCCGTTGA
CGAGACCGGAGAACTGCAGCAGACGAGCTTTGGTACCGGCATGGGGGATT
CTTTGGACTTCTATAAGAAGATTCCCTTGACAGCCATGCCATATGGGCAG
GCCATGGCCATCATGGCGCTGGGCGAGTATCTCCGGGGCCACCTATAG back to topCoding sequence (CDS) from alignment at MCQH01000188:11669..12766+ >ATCC10864_007844-T1 ID=ATCC10864_007844-T1|Name=ATCC10864_007844-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1098bp|location=Sequence derived from alignment at MCQH01000188:11669..12766+ (Aspergillus niger ATCC 10864)
ATGGCTTCTACATCTCCTCCCGCTGTCCGATCCAAAATTGACTTGCTCAT
AACCAACCTCGTCAACATCCAAGACAAAACCGGTCAATTTCTCCTCCCCC
TCGCTGATGGCCGCATTATCGACACCAAGTCCTGGCATGGCTGGGAATGG
ACGCATGGAATCGGCCTCTATGGCATCTGGAAGTACTACGAAATGACCGG
CTCTCCGCATCTCCTGCAAATTATCGAGGATTGGTTCGCCGCCCGCTTCG
CTGAAGGCGGTACCACTAAGAACATCAACACCATGGCCGTCTTCCTTACT
CTGGCATACGTATACGAGAAGACGCAAAACCCTGTCTACCTGCCCTGGCT
GGACGCATGGGCCGAATGGGCCATGCATGAACTCCCACGCACCAAGCAGG
GAGGCATGCAGCACGCCACATACCTCACGGAAAATTACCAGCAGTTGTGG
GATGATACGTTGATGATGACCGTGATGCCGTTGGCAAAAATTGGAAAGTT
GCTGAATCGGCCGGATTATGTGGAGGAGGCCAAGCGTCAGACGTTGGTGC
ACGTCAAGTACTTGGTGGATACGAGCACCGGGCTGTGGTTTCATGGCTGG
ACGTTCGAGGATGGTGGACATAACTTTGCTAGAGCGAGGTGGGCACGCGG
TAATAGTTGGGTGACTATGGTTATCCCAGAGTTTGTTGAGTTGTTGGATT
TGAAGGAGGGGGATCCTATTCGCCTGTTCTTGTTGGATACGTTAGAGGCC
CAATGCGAGGCTCTCATGGGCCTGCAGGAGGAATCGGGCTTTTGGCACAC
CCTGCTTGACCATCCTGATTCATATGTCGAGGCCTCCGCCACAGCAGGCT
TCGCATATGGTATCCTTAAGGCTGTTAGGAAGAGGTATCTGCCAAAGAAG
TATCGGGTAGTCGCAGAGAAGGCCATTCAGGCAGTGTTGAGCGCCGTTGA
CGAGACCGGAGAACTGCAGCAGACGAGCTTTGGTACCGGCATGGGGGATT
CTTTGGACTTCTATAAGAAGATTCCCTTGACAGCCATGCCATATGGGCAG
GCCATGGCCATCATGGCGCTGGGCGAGTATCTCCGGGGCCACCTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR012341 |
| InterPro | IPR010905 |
| PFAM | PF07470 |
| InterPro | IPR008928 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH105 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000188 | supercontig | MCQH01000188:11669..12766 + |
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