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ATCC10864_007854-T1, ATCC10864_007854-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007854-T1
Unique NameATCC10864_007854-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000188:42774..43430-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007854-T1 ID=ATCC10864_007854-T1|Name=ATCC10864_007854-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=657bp|location=Sequence derived from alignment at MCQH01000188:42774..43430- (Aspergillus niger ATCC 10864)
ATGACAGTTGCTGCGACTGTACTTCCCGCCGGCGAAGATGCGCCCGCATA
CCGCCCGCGCAGCTACCAGGTGGAGATGTTTGAGGCGAGTTTGAAGGAAA
ATATCATTGTCACGGTAATGAAATCTTACTATTTATGAAGGTTCAAGCTA
ATTTTCAGCAGATGGGAACTGGCAGTGGGAAAACTCACATGTATGTGTTA
TTTGCTGTTGATGCTTCTCCGCAGTGGAACTCTAATTGAGTTGACGGTTT
CACTGCAGAGCTCTGCTGCGAATCATAAAGGAACTGGAGAGTAATCCGCA
CAAGGTGAGAAGGGCAATGAAACTATATCGGTGTATAAGTCACTAGCTTA
TGCATTACTCCAGTTGATCTGGTTCTTAACGCCCACTGTCGCTCTATGTC
TGCAACAATTCAAGTTCCTCTCCGACAATATTCCCGCCGTCAGGGCTCGG
ACACTCACGAGTCTAGATAAGGTCGAGCTCTGGACAGAGCAGCCGGTCTG
GGATGCTATCCTGAAGGAGATGCAGGTGGTGGTGTCCACGCATGCGGTTC
TTGCCGATGCGATGAGCCATGGGTTCGTCAAGATCACCCAGCTGGGTCTG
ATGATTTTCGATGAAGGTATAGTAACGCGATGTCTAAATCCGGAGATTAT
GATGTAG
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Coding sequence (CDS) from alignment at MCQH01000188:42774..43430-

>ATCC10864_007854-T1 ID=ATCC10864_007854-T1|Name=ATCC10864_007854-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1932bp|location=Sequence derived from alignment at MCQH01000188:42774..43430- (Aspergillus niger ATCC 10864)
TTGATCTGGTTCTTAACGCCCACTGTCGCTCTATGTCTGCAACAATTCAA
GTTCCTCTCCGACAATATTCCCGCCGTCAGGGCTCGGACACTCACGAGTC
TAGATAAGGTCGAGCTCTGGACAGAGCAGCCGGTCTGGGATGCTATCCTG
AAGGAGATGCAGGTGGTGGTGTCCACGCATGCGGTTCTTGCCGATGCGAT
GAGCCATGGGTTCGTCAAGATCACCCAGCTGGGTCTGATGATTTTCGATG
AAGGTATAGTAACGCGATGTCTAAATCCGGAGATTATGATGTAGAGCTCT
GCTGCGAATCATAAAGGAACTGGAGAGTAATCCGCACAAGATGGGAACTG
GCAGTGGGAAAACTCACATATGACAGTTGCTGCGACTGTACTTCCCGCCG
GCGAAGATGCGCCCGCATACCGCCCGCGCAGCTACCAGGTGGAGATGTTT
GAGGCGAGTTTGAAGGAAAATATCATTGTCACGTTGATCTGGTTCTTAAC
GCCCACTGTCGCTCTATGTCTGCAACAATTCAAGTTCCTCTCCGACAATA
TTCCCGCCGTCAGGGCTCGGACACTCACGAGTCTAGATAAGGTCGAGCTC
TGGACAGAGCAGCCGGTCTGGGATGCTATCCTGAAGGAGATGCAGGTGGT
GGTGTCCACGCATGCGGTTCTTGCCGATGCGATGAGCCATGGGTTCGTCA
AGATCACCCAGCTGGGTCTGATGATTTTCGATGAAGGTATAGTAACGCGA
TGTCTAAATCCGGAGATTATGATGTAGAGCTCTGCTGCGAATCATAAAGG
AACTGGAGAGTAATCCGCACAAGATGGGAACTGGCAGTGGGAAAACTCAC
ATATGACAGTTGCTGCGACTGTACTTCCCGCCGGCGAAGATGCGCCCGCA
TACCGCCCGCGCAGCTACCAGGTGGAGATGTTTGAGGCGAGTTTGAAGGA
AAATATCATTGTCACGTTGATCTGGTTCTTAACGCCCACTGTCGCTCTAT
GTCTGCAACAATTCAAGTTCCTCTCCGACAATATTCCCGCCGTCAGGGCT
CGGACACTCACGAGTCTAGATAAGGTCGAGCTCTGGACAGAGCAGCCGGT
CTGGGATGCTATCCTGAAGGAGATGCAGGTGGTGGTGTCCACGCATGCGG
TTCTTGCCGATGCGATGAGCCATGGGTTCGTCAAGATCACCCAGCTGGGT
CTGATGATTTTCGATGAAGGTATAGTAACGCGATGTCTAAATCCGGAGAT
TATGATGTAGAGCTCTGCTGCGAATCATAAAGGAACTGGAGAGTAATCCG
CACAAGATGGGAACTGGCAGTGGGAAAACTCACATATGACAGTTGCTGCG
ACTGTACTTCCCGCCGGCGAAGATGCGCCCGCATACCGCCCGCGCAGCTA
CCAGGTGGAGATGTTTGAGGCGAGTTTGAAGGAAAATATCATTGTCACGT
TGATCTGGTTCTTAACGCCCACTGTCGCTCTATGTCTGCAACAATTCAAG
TTCCTCTCCGACAATATTCCCGCCGTCAGGGCTCGGACACTCACGAGTCT
AGATAAGGTCGAGCTCTGGACAGAGCAGCCGGTCTGGGATGCTATCCTGA
AGGAGATGCAGGTGGTGGTGTCCACGCATGCGGTTCTTGCCGATGCGATG
AGCCATGGGTTCGTCAAGATCACCCAGCTGGGTCTGATGATTTTCGATGA
AGGTATAGTAACGCGATGTCTAAATCCGGAGATTATGATGTAGAGCTCTG
CTGCGAATCATAAAGGAACTGGAGAGTAATCCGCACAAGATGGGAACTGG
CAGTGGGAAAACTCACATATGACAGTTGCTGCGACTGTACTTCCCGCCGG
CGAAGATGCGCCCGCATACCGCCCGCGCAGCTACCAGGTGGAGATGTTTG
AGGCGAGTTTGAAGGAAAATATCATTGTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DCL21_2ATCC10864_007854Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007854-T1ATCC10864_007854-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007854-T1.cdsATCC10864_007854-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007854-T1.exon4ATCC10864_007854-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007854-T1.exon3ATCC10864_007854-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007854-T1.exon2ATCC10864_007854-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007854-T1.exon1ATCC10864_007854-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
PFAMPF04851
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
ProductDicer-like protein 2-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000188supercontigMCQH01000188:42774..43430 -
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