You are here

Home

ATCC10864_007900-T1, ATCC10864_007900-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007900-T1
Unique NameATCC10864_007900-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000188:164557..165692+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007900-T1 ID=ATCC10864_007900-T1|Name=ATCC10864_007900-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1136bp|location=Sequence derived from alignment at MCQH01000188:164557..165692+ (Aspergillus niger ATCC 10864)
ATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCATGG
CTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCAGC
ATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACCAA
GTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCCTC
TTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGCCC
AGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGGAA
CAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCATGA
CATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGAAA
ACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAAGTAA
GAGATAGTCACCCTTCCAGACTCAATAGCGGATGGGATGAAAACTAACAC
ACTGCAGTATACCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTC
AAGAGGATCCTTGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAA
CCCTAATTCTGGTTTGAGAACCGCCTTTGCGCAATTCGAGGTATGCGTAA
TGATTCATGTCCCAATGTGTAGCAACTAATGAAGTGTAGACACCGGAGGT
TGCGAACAGAGTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATC
TTCACCACCGCTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATT
TCCACTCGCACACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCAC
CACACGAGTGGATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGA
ACGGCGAGGGTAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAAC
GTCGAGCCCACCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCA
AGACAATAGGGAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCC
GTGAGAGTTTCTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGC
CTACCTCTCGTGTGGGAAGCCTCTGCAACGGCCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000188:164557..165692+

>ATCC10864_007900-T1 ID=ATCC10864_007900-T1|Name=ATCC10864_007900-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3078bp|location=Sequence derived from alignment at MCQH01000188:164557..165692+ (Aspergillus niger ATCC 10864)
ATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCATGG
CTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCAGC
ATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACCAA
GTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCCTC
TTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGCCC
AGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGGAA
CAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCATGA
CATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGAAA
ACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAATATA
CCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTCAAGAGGATCCT
TGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAACCCTAATTCTG
GTTTGAGAACCGCCTTTGCGCAATTCGAGACACCGGAGGTTGCGAACAGA
GTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATCTTCACCACCG
CTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATTTCCACTCGCA
CACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCACCACACGAGTG
GATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGAACGGCGAGGG
TAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAACGTCGAGCCCA
CCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCAAGACAATAGG
GAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCCGTGAGAGTTT
CTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGCCTACCTCTCG
TGTGGGAAGCCTCTGCAACGGCCTGAATGCCCAACGGTTACCATGTGTAT
GTCACCTCACGGATAACTTCTCATGGCTTTGAGGGACAACAGTATATACC
TGCGGGTAACTTCCCGTCATTTCAGCATGTGTCTCATAACCACCACTTTT
CACATATGACCCATCCAGGATACCAAGTACATCATGGCTCCCCCTTGCAG
CAGGTGCTCAAGCGATCGGGTCCCTCTTGGGTGACTATCCCTCCGCAGTC
GTCCCTACAGGGTTCAGTTCAAGCCCAGGCGGGACCGAGTCAAGGCAACG
TTGCCAACAATCCACGTGAACCGGAACAGCCTGAATCACAGTCCAGAGAA
TTGTCACCACTTGAGAGTGGTCATGACATCGTGTGTGATGTTTTAATCGT
CGGAGAAATAGAAGTCACAGACGAAAACGCTCAAGATCTCCTTCCCCTCG
AAGCTCGCCTTTTTGTTGGAAATATACCAAGTGCTCTTTGTCCAACTCAG
ATAAAGTTCGAGCTCAAGAGGATCCTTGCCAGATATGGATGTTGTTATGT
CAAAGTGAAGACGAACCCTAATTCTGGTTTGAGAACCGCCTTTGCGCAAT
TCGAGACACCGGAGGTTGCGAACAGAGTCATGCAAAAGAGCAAGGATCAG
CCATCAGAATTCGATCTTCACCACCGCTCTCTCCGGTTCGAGATGGCGAA
AGGGAAAAGGGAGATTTCCACTCGCACACGTTCCCGTGAAGTTTTCTCTC
AACCAGACCCTTGCACCACACGAGTGGATAATATTGAGGGTAGGGTCGAG
CCCGCCCAAGAAATGAACGGCGAGGGTAGGGTCGAGCCCGCCCATAACAT
GAATGCCGAGGGCAACGTCGAGCCCACCCACAGAATCAACGGCGAGGGCA
GAGTTGAGCCCCCGCAAGACAATAGGGAAGTGGTCTCCGAAAGCGGCAAG
TCTGCTGGGGAAACCCGTGAGAGTTTCTATAATGTAGGGGCCAGAGGCAG
CCACTCAGCTCCGTGCCTACCTCTCGTGTGGGAAGCCTCTGCAACGGCCT
GAATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCAT
GGCTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCA
GCATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACC
AAGTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCC
TCTTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGC
CCAGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGG
AACAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCAT
GACATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGA
AAACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAATA
TACCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTCAAGAGGATC
CTTGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAACCCTAATTC
TGGTTTGAGAACCGCCTTTGCGCAATTCGAGACACCGGAGGTTGCGAACA
GAGTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATCTTCACCAC
CGCTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATTTCCACTCG
CACACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCACCACACGAG
TGGATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGAACGGCGAG
GGTAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAACGTCGAGCC
CACCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCAAGACAATA
GGGAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCCGTGAGAGT
TTCTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGCCTACCTCT
CGTGTGGGAAGCCTCTGCAACGGCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007900ATCC10864_007900Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007900-T1.exon1ATCC10864_007900-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007900-T1.exon2ATCC10864_007900-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007900-T1.exon3ATCC10864_007900-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007900-T1.cdsATCC10864_007900-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007900-T1ATCC10864_007900-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035979
InterProIPR012677
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000188supercontigMCQH01000188:164557..165692 +
Powered by Drupal