You are here

Home

ATCC10864_007938-T1, ATCC10864_007938-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007938-T1
Unique NameATCC10864_007938-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000191:23582..24572+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007938-T1 ID=ATCC10864_007938-T1|Name=ATCC10864_007938-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=991bp|location=Sequence derived from alignment at MCQH01000191:23582..24572+ (Aspergillus niger ATCC 10864)
ATGGGACTTGCAGCACCTCGCAAGTAAGTTTCCACGGCTAACATCATTAC
ATCCTTCACTATCCACCATTTGCGGTATTCTGACCAGGCAGTGACCTAGG
AAAATCAAAATTTCTCATGACCCTAACAATACCAATTGGTCACGGTCAAC
AAGCGGTTTTGGGCACAAGATCTTGAGCTCCCAGGGATGGACACCCGGGA
GCTTCTTGGGGGCACGCAATGCCGCACATGCTGAAATGTTTACCGCAGCG
AGTGCATCTCATATCAAGGTTGTCTTGAAGGATGATACACTGGGCCTAGG
GGCGCGACCTAAGCGTGATCCTTTAAATGAGCCCACTGGTCTTGATGCAT
TCAAAGGACTCCTTGGCCGGCTAAACGGCAAGTCAGACGCGGATTTGCAG
GTCGAGCAGCAAAAGCGCGACAACGTAAAATTGGCTCGATATGCTGCCAC
GAAGTGGCAAGCAGTCACATTCATAAGTGGTGGCTTACTAGCTCAGGAAA
AAACCACCCCCATTGTTACTGAGGAGCCACAAGGAATCCACAAAGACAAG
CAAGAGGACAAACTGTCTGCTACGGTACCTGGACCTGACTCTGACGGCGT
TGAGGGGTCAGATAACATTGGAGGCCAAAGTGATCAAAGCATCAAAAAGA
AGAAATCGAAGTCCAAGAACCATCGGGAGAAGAAGGACAGAAAAAGAAAG
CATACTGAAGAGCCTGAGTCCACGGACTCCGGAAATACGAACAAGAGGTC
AACAGAGAAAAAGAGTAAGGCAACTAGGGATGATGAAGAAAGCTCTTCAA
CAACTTCCAAAGGTCTGTCGAGGGAGCGCCGTCCGATGGGGAGACATGTT
TTTAGAGGCCGACATATTGCGCAGAAGAAAGCGGCTCTCATGGACGAGAA
GTCCCTCAACGAGGTGAGAAGGAATACTTCGATGTTGAAATCCCAGATCG
CAGAAGCTAATATGTTACAGATATTCATGGTCAAATCATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000191:23582..24572+

>ATCC10864_007938-T1 ID=ATCC10864_007938-T1|Name=ATCC10864_007938-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2574bp|location=Sequence derived from alignment at MCQH01000191:23582..24572+ (Aspergillus niger ATCC 10864)
ATGGGACTTGCAGCACCTCGCAAGAAAATCAAAATTTCTCATGACCCTAA
CAATACCAATTGGTCACGGTCAACAAGCGGTTTTGGGCACAAGATCTTGA
GCTCCCAGGGATGGACACCCGGGAGCTTCTTGGGGGCACGCAATGCCGCA
CATGCTGAAATGTTTACCGCAGCGAGTGCATCTCATATCAAGGTTGTCTT
GAAGGATGATACACTGGGCCTAGGGGCGCGACCTAAGCGTGATCCTTTAA
ATGAGCCCACTGGTCTTGATGCATTCAAAGGACTCCTTGGCCGGCTAAAC
GGCAAGTCAGACGCGGATTTGCAGGTCGAGCAGCAAAAGCGCGACAACGT
AAAATTGGCTCGATATGCTGCCACGAAGTGGCAAGCAGTCACATTCATAA
GTGGTGGCTTACTAGCTCAGGAAAAAACCACCCCCATTGTTACTGAGGAG
CCACAAGGAATCCACAAAGACAAGCAAGAGGACAAACTGTCTGCTACGGT
ACCTGGACCTGACTCTGACGGCGTTGAGGGGTCAGATAACATTGGAGGCC
AAAGTGATCAAAGCATCAAAAAGAAGAAATCGAAGTCCAAGAACCATCGG
GAGAAGAAGGACAGAAAAAGAAAGCATACTGAAGAGCCTGAGTCCACGGA
CTCCGGAAATACGAACAAGAGGTCAACAGAGAAAAAGAGTAAGGCAACTA
GGGATGATGAAGAAAGCTCTTCAACAACTTCCAAAGGTCTGTCGAGGGAG
CGCCGTCCGATGGGGAGACATGTTTTTAGAGGCCGACATATTGCGCAGAA
GAAAGCGGCTCTCATGGACGAGAAGTCCCTCAACGAGATATTCATGGTCA
AATCATAGATGGGACTTGCAGCACCTCGCAAGAAAATCAAAATTTCTCAT
GACCCTAACAATACCAATTGGTCACGGTCAACAAGCGGTTTTGGGCACAA
GATCTTGAGCTCCCAGGGATGGACACCCGGGAGCTTCTTGGGGGCACGCA
ATGCCGCACATGCTGAAATGTTTACCGCAGCGAGTGCATCTCATATCAAG
GTTGTCTTGAAGGATGATACACTGGGCCTAGGGGCGCGACCTAAGCGTGA
TCCTTTAAATGAGCCCACTGGTCTTGATGCATTCAAAGGACTCCTTGGCC
GGCTAAACGGCAAGTCAGACGCGGATTTGCAGGTCGAGCAGCAAAAGCGC
GACAACGTAAAATTGGCTCGATATGCTGCCACGAAGTGGCAAGCAGTCAC
ATTCATAAGTGGTGGCTTACTAGCTCAGGAAAAAACCACCCCCATTGTTA
CTGAGGAGCCACAAGGAATCCACAAAGACAAGCAAGAGGACAAACTGTCT
GCTACGGTACCTGGACCTGACTCTGACGGCGTTGAGGGGTCAGATAACAT
TGGAGGCCAAAGTGATCAAAGCATCAAAAAGAAGAAATCGAAGTCCAAGA
ACCATCGGGAGAAGAAGGACAGAAAAAGAAAGCATACTGAAGAGCCTGAG
TCCACGGACTCCGGAAATACGAACAAGAGGTCAACAGAGAAAAAGAGTAA
GGCAACTAGGGATGATGAAGAAAGCTCTTCAACAACTTCCAAAGGTCTGT
CGAGGGAGCGCCGTCCGATGGGGAGACATGTTTTTAGAGGCCGACATATT
GCGCAGAAGAAAGCGGCTCTCATGGACGAGAAGTCCCTCAACGAGATATT
CATGGTCAAATCATAGATGGGACTTGCAGCACCTCGCAAGAAAATCAAAA
TTTCTCATGACCCTAACAATACCAATTGGTCACGGTCAACAAGCGGTTTT
GGGCACAAGATCTTGAGCTCCCAGGGATGGACACCCGGGAGCTTCTTGGG
GGCACGCAATGCCGCACATGCTGAAATGTTTACCGCAGCGAGTGCATCTC
ATATCAAGGTTGTCTTGAAGGATGATACACTGGGCCTAGGGGCGCGACCT
AAGCGTGATCCTTTAAATGAGCCCACTGGTCTTGATGCATTCAAAGGACT
CCTTGGCCGGCTAAACGGCAAGTCAGACGCGGATTTGCAGGTCGAGCAGC
AAAAGCGCGACAACGTAAAATTGGCTCGATATGCTGCCACGAAGTGGCAA
GCAGTCACATTCATAAGTGGTGGCTTACTAGCTCAGGAAAAAACCACCCC
CATTGTTACTGAGGAGCCACAAGGAATCCACAAAGACAAGCAAGAGGACA
AACTGTCTGCTACGGTACCTGGACCTGACTCTGACGGCGTTGAGGGGTCA
GATAACATTGGAGGCCAAAGTGATCAAAGCATCAAAAAGAAGAAATCGAA
GTCCAAGAACCATCGGGAGAAGAAGGACAGAAAAAGAAAGCATACTGAAG
AGCCTGAGTCCACGGACTCCGGAAATACGAACAAGAGGTCAACAGAGAAA
AAGAGTAAGGCAACTAGGGATGATGAAGAAAGCTCTTCAACAACTTCCAA
AGGTCTGTCGAGGGAGCGCCGTCCGATGGGGAGACATGTTTTTAGAGGCC
GACATATTGCGCAGAAGAAAGCGGCTCTCATGGACGAGAAGTCCCTCAAC
GAGATATTCATGGTCAAATCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PXR1ATCC10864_007938Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007938-T1.exon1ATCC10864_007938-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007938-T1.exon2ATCC10864_007938-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007938-T1.exon3ATCC10864_007938-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007938-T1.cdsATCC10864_007938-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007938-T1ATCC10864_007938-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01585
InterProIPR000467
Properties
Property NameValue
Producttelomerase inhibitor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000191supercontigMCQH01000191:23582..24572 +
Powered by Drupal