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ATCC10864_007955-T1, ATCC10864_007955-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007955-T1
Unique NameATCC10864_007955-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000191:89234..90412+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007955-T1 ID=ATCC10864_007955-T1|Name=ATCC10864_007955-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1179bp|location=Sequence derived from alignment at MCQH01000191:89234..90412+ (Aspergillus niger ATCC 10864)
ATGAACGCACCAGACCGGTAGGTGGAACGTTCTTCTTACATCTACGCAGT
CTATCTTGTAGCATGCTTTATTCCCACTTGGTTTCCGCGCCCCTTCCTCT
CCTCCCCCACCTTTTGGCTTGTTCTAGGTTCGGGAGCTGTTCGCTGGTGG
GAATGGTGTGACTGAAGTCTCAATGCGGACGGTGCCATTAACCGGGCACA
TGCTCTTGCCTTCCCCCCTCCATTCACTGCCCCAGAGTGCCGAACTATGT
TATGGACTCTACTCCTGTCCCTCTTCCTCTCCCTCAGTTCATTTCAATGT
TTATGCCCCTTGTCCAGATCTCTCATTGAATGGATTGACTTCGTACTTTG
CGTTGTCTTCACCCCCTAGCATTCCTGTCATATTGTGAATCTTTCTCGAA
CACAACGATTTTAAGAATGGAATCCATCATGCCTGCAGAAATGGTGTATG
CGCGCCTGAAGAATGGCAGTGGCGGATCTCGCGTTCGCTGCCAGTCTACC
GTCAACGTTTCTCATGACCAGCAGCCGAGATCCGCTTCGGGTTTTCTTTG
AAGATTCTACTTGCCTTCATTTGTGAAGCTTCTAATACATTCGGTCCACT
GACTCGGTATGAAACCTAGATACGAATCGTTCGTTCTTGCGAATGGCGAG
AATAAAGTCGAGATGGAGATCGATACTCGTATGTCATCCAAACCTCGCAC
CTAAACGGTCTGCGTTCATTTCTGACATGGGCTTCTTGTGCTAGGAATCC
CATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAAAT
TTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCGTA
CAAGGTATGTCGGCGATCGTGATTTATCCTCGTTTCTATTTCCGGGCATT
CTTCATGCTCCCAGTTGCTGCTTTTATCAGAGCTGTGGGGTTAGTTTGCG
TAAGGGTCTGACGTGACTGTCATAGGTTCCCCATCCGCTTGTTCCCAATT
TCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTA
ATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGA
GTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGC
AGCAGAATGGCGTCCAGGATGGTGTTTAG
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Coding sequence (CDS) from alignment at MCQH01000191:89234..90412+

>ATCC10864_007955-T1 ID=ATCC10864_007955-T1|Name=ATCC10864_007955-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1560bp|location=Sequence derived from alignment at MCQH01000191:89234..90412+ (Aspergillus niger ATCC 10864)
ATGAACGCACCAGACCGATACGAATCGTTCGTTCTTGCGAATGGCGAGAA
TAAAGTCGAGATGGAGATCGATACTCGAATCCCATCTTCTGCCATCTTCA
CCTTCAATAAGGAAGATCACACGTTGGGAAATTTGATCCGCTCTCGCCTC
TTGCAAAGCTCTCATGTTCTCTTCGCTGCGTACAAGGTTCCCCATCCGCT
TGTTCCCAATTTCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAA
AGGATGCGGTAATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATC
CTCTCTCGGGAGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGC
TACCGCCCAGCAGCAGAATGGCGTCCAGGATGGTGTTTAGATGAACGCAC
CAGACCGATACGAATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAG
ATGGAGATCGATACTCGAATCCCATCTTCTGCCATCTTCACCTTCAATAA
GGAAGATCACACGTTGGGAAATTTGATCCGCTCTCGCCTCTTGCAAAGCT
CTCATGTTCTCTTCGCTGCGTACAAGGTTCCCCATCCGCTTGTTCCCAAT
TTCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGT
AATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGG
AGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAG
CAGCAGAATGGCGTCCAGGATGGTGTTTAGATGAACGCACCAGACCGATA
CGAATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCG
ATACTCGAATCCCATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCAC
ACGTTGGGAAATTTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCT
CTTCGCTGCGTACAAGGTTCCCCATCCGCTTGTTCCCAATTTCCAGCTTC
GAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTAATTGCAGCC
TGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGAGTTTACTAA
GGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGCAGCAGAATG
GCGTCCAGGATGGTGTTTAGATGAACGCACCAGACCGATACGAATCGTTC
GTTCTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCGATACTCGAAT
CCCATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAA
ATTTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCG
TACAAGGTTCCCCATCCGCTTGTTCCCAATTTCCAGCTTCGAGTTCAGAC
CGATGGCGATATCACCCCAAAGGATGCGGTAATTGCAGCCTGCCATGAGC
TTGTTCGGGACCTGGGTATCCTCTCTCGGGAGTTTACTAAGGAATATGAG
CTCCGTAAGATGGTGGGGGCTACCGCCCAGCAGCAGAATGGCGTCCAGGA
TGGTGTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005665RNA polymerase II, core complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0001055RNA polymerase II activity
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription by RNA polymerase II
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007955ATCC10864_007955Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007955-T1.exon1ATCC10864_007955-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007955-T1.exon2ATCC10864_007955-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007955-T1.exon3ATCC10864_007955-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007955-T1.exon4ATCC10864_007955-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007955-T1.cdsATCC10864_007955-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007955-T1ATCC10864_007955-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009025
InterProIPR008193
InterProIPR037685
PFAMPF13656
PFAMPF01193
InterProIPR036603
Properties
Property NameValue
NoteBUSCO:EOG0926591L
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000191supercontigMCQH01000191:89234..90412 +
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