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ATCC10864_007997-T1, ATCC10864_007997-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007997-T1
Unique NameATCC10864_007997-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000195:57864..59228-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007997-T1 ID=ATCC10864_007997-T1|Name=ATCC10864_007997-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1365bp|location=Sequence derived from alignment at MCQH01000195:57864..59228- (Aspergillus niger ATCC 10864)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCGTATGGCA
CCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAAT
TCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGG
TCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTC
TCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCG
ATTTGTGACCTTTGTATATCCCTTTGGATATTTAAGGTTCATCAGATGCA
AAGTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGAGTTCATG
ACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGC
CAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCC
GTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGAC
TACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTG
GAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTA
ACCCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGAAGTATCG
GAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTG
TACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGT
TCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCA
TTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAG
CTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGT
CAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAGACTGGTC
GCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAG
ATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGC
CGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCG
AGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAG
CTGTTGCGCCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000195:57864..59228-

>ATCC10864_007997-T1 ID=ATCC10864_007997-T1|Name=ATCC10864_007997-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4500bp|location=Sequence derived from alignment at MCQH01000195:57864..59228- (Aspergillus niger ATCC 10864)
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006086acetyl-CoA biosynthetic process from pyruvate
Vocabulary: Molecular Function
TermDefinition
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDB1ATCC10864_007997Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007997-T1ATCC10864_007997-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007997-T1.cdsATCC10864_007997-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007997-T1.exon4ATCC10864_007997-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007997-T1.exon3ATCC10864_007997-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007997-T1.exon2ATCC10864_007997-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007997-T1.exon1ATCC10864_007997-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02780
InterProIPR009014
PFAMPF02779
InterProIPR029061
InterProIPR027110
InterProIPR033248
InterProIPR005475
Properties
Property NameValue
Product beta subunit
Productpyruvate dehydrogenase E1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000195supercontigMCQH01000195:57864..59228 -
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