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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000195:66166..68019- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_008001-T1 ID=ATCC10864_008001-T1|Name=ATCC10864_008001-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1854bp|location=Sequence derived from alignment at MCQH01000195:66166..68019- (Aspergillus niger ATCC 10864)
ATGGCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAA
CTCTCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTC
CCGATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCG
CAAGCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAA
GCGTGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAG
CAGTTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTA
AGGCCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACA
ACCCCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTC
AGAGCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGG
TTTCGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATA
CCGTCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACT
CTCCAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAAT
GAGCCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTA
TTACTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTC
CCTCTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTT
GGTTTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTG
TTATGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGC
GGTGTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTT
GTCGGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGT
AGAGGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCT
CAGAAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCAC
TACAAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACA
GCTACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTC
CATCTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCA
AGCATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGA
ACTGTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACA
ACTTGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTAT
TATCCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGA
CGGGCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAG
TCCGGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTT
GCCGATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGA
CGGCAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAG
TTGGTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCT
GCTATTCCTCCAGTTGCGGACGGCCAGAGTGAGTCTGCTGCTAATCCCGC
TGGCAATGGCAACGAAGCGGGAAGCGTCATGGACCTAGATCCAGGCCAGG
CCGCGCTTGAGGACGCCACGCGCGCCGATGCCCCGGTTCCAGAAGCACCC
CAGAATACGATTCCCGACACGTCAACTGGGGATGGCGATGTTGAAATGTC
TTGA back to topCoding sequence (CDS) from alignment at MCQH01000195:66166..68019- >ATCC10864_008001-T1 ID=ATCC10864_008001-T1|Name=ATCC10864_008001-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1854bp|location=Sequence derived from alignment at MCQH01000195:66166..68019- (Aspergillus niger ATCC 10864)
ATGGCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAA
CTCTCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTC
CCGATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCG
CAAGCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAA
GCGTGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAG
CAGTTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTA
AGGCCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACA
ACCCCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTC
AGAGCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGG
TTTCGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATA
CCGTCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACT
CTCCAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAAT
GAGCCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTA
TTACTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTC
CCTCTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTT
GGTTTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTG
TTATGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGC
GGTGTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTT
GTCGGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGT
AGAGGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCT
CAGAAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCAC
TACAAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACA
GCTACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTC
CATCTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCA
AGCATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGA
ACTGTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACA
ACTTGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTAT
TATCCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGA
CGGGCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAG
TCCGGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTT
GCCGATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGA
CGGCAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAG
TTGGTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCT
GCTATTCCTCCAGTTGCGGACGGCCAGAGTGAGTCTGCTGCTAATCCCGC
TGGCAATGGCAACGAAGCGGGAAGCGTCATGGACCTAGATCCAGGCCAGG
CCGCGCTTGAGGACGCCACGCGCGCCGATGCCCCGGTTCCAGAAGCACCC
CAGAATACGATTCCCGACACGTCAACTGGGGATGGCGATGTTGAAATGTC
TTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0048188 | Set1C/COMPASS complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051568 | histone H3-K4 methylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR037353 |
| InterPro | IPR013320 |
| InterPro | IPR043136 |
| InterPro | IPR001870 |
| InterPro | IPR003877 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262X7T |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000195 | supercontig | MCQH01000195:66166..68019 - |
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