You are here

Home

ATCC10864_008033-T1, ATCC10864_008033-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008033-T1
Unique NameATCC10864_008033-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000195:141380..142998-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008033-T1 ID=ATCC10864_008033-T1|Name=ATCC10864_008033-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1619bp|location=Sequence derived from alignment at MCQH01000195:141380..142998- (Aspergillus niger ATCC 10864)
ATGGAAGGCGACGTGGTAGCACAGTTCACTGAAATCACCGGCTCAAAGCC
AGAGCTGGCTACCCAGTATCTGCAGCTGACTGATTTCAATATTGAGCAGG
CCGTACAGCTTTTCTTCGAGAATGGCGGTGCGCCACTGACTGATGATCCC
TTACCGTCGGCCTCCACGCCACAGCGAGCTTCTCATGCTGGCGGCTATGG
AAATGAGTCTGGGGTAGTCAATGTTGACTCCGATGACGACGTCACAATAG
ATGAGTCTCGCTCTGCGCCTCGGAATCACCCATCGCACGACGCTGTGTTT
GAAGACGATGCAGCTATGGCCCGTCGCCTCCAAGAAGAGATGTACGGCGG
AGGAGATGCTGAAGAGAACGTGCGTGCGCCGATGGCCCGTACAACAGAAA
CCTTGGTGGGGCCTGAAGCGGACTTTGACGACGGCGATATGCATGCCAGC
ATATTGGGTCAACTGCGCGCGCGCCAGCAGCGAACCAGTCAGCACTTCAC
CTTGCCCTTCCATTTCTAGTCTTGTCCAGTCACAGCTGACTTTGCTTCTT
CTTAGACCGACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTG
GAGAGGACGATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGA
GCTTCCGAGGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCC
CCCTTTCGAGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAG
GTCGCGACAATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTC
TTTGATTGCCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAG
AGACACCGTTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACC
CTCGCGCGGGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCA
GATAATTATCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGAT
GAAGGTCTGGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGC
AACTCCACGAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAAT
CCCGTGGCGAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGAT
GACCGAAGAAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATG
AGGCGTCGCAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGC
ACCGACGATGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGA
GGCCGAACAACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGAC
CCCACACAGAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTC
CGACACCCGTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGT
CCAGCGGATCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAG
CTGGCGTGGAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTG
TTGGATCAGACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGAT
AGGCTATGTTGAGGAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000195:141380..142998-

>ATCC10864_008033-T1 ID=ATCC10864_008033-T1|Name=ATCC10864_008033-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3102bp|location=Sequence derived from alignment at MCQH01000195:141380..142998- (Aspergillus niger ATCC 10864)
ACCGACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTGGAGAG
GACGATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGAGCTTC
CGAGGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCCCCCTT
TCGAGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAGGTCGC
GACAATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTCTTTGA
TTGCCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAGAGACA
CCGTTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACCCTCGC
GCGGGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCAGATAA
TTATCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGATGAAGG
TCTGGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGCAACTC
CACGAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAATCCCGT
GGCGAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGATGACCG
AAGAAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATGAGGCG
TCGCAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGCACCGA
CGATGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGAGGCCG
AACAACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGACCCCAC
ACAGAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTCCGACA
CCCGTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGTCCAGC
GGATCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAGCTGGC
GTGGAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTGTTGGA
TCAGACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGATAGGCT
ATGTTGAGGAATAGATGGAAGGCGACGTGGTAGCACAGTTCACTGAAATC
ACCGGCTCAAAGCCAGAGCTGGCTACCCAGTATCTGCAGCTGACTGATTT
CAATATTGAGCAGGCCGTACAGCTTTTCTTCGAGAATGGCGGTGCGCCAC
TGACTGATGATCCCTTACCGTCGGCCTCCACGCCACAGCGAGCTTCTCAT
GCTGGCGGCTATGGAAATGAGTCTGGGGTAGTCAATGTTGACTCCGATGA
CGACGTCACAATAGATGAGTCTCGCTCTGCGCCTCGGAATCACCCATCGC
ACGACGCTGTGTTTGAAGACGATGCAGCTATGGCCCGTCGCCTCCAAGAA
GAGATGTACGGCGGAGGAGATGCTGAAGAGAACGTGCGTGCGCCGATGGC
CCGTACAACAGAAACCTTGGTGGGGCCTGAAGCGGACTTTGACGACGGCG
ATATGCATGCCAGCATATTGGGTCAACTGCGCGCGCGCCAGCAGCGAACC
AACCGACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTGGAGA
GGACGATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGAGCTT
CCGAGGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCCCCCT
TTCGAGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAGGTCG
CGACAATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTCTTTG
ATTGCCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAGAGAC
ACCGTTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACCCTCG
CGCGGGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCAGATA
ATTATCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGATGAAG
GTCTGGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGCAACT
CCACGAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAATCCCG
TGGCGAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGATGACC
GAAGAAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATGAGGC
GTCGCAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGCACCG
ACGATGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGAGGCC
GAACAACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGACCCCA
CACAGAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTCCGAC
ACCCGTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGTCCAG
CGGATCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAGCTGG
CGTGGAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTGTTGG
ATCAGACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGATAGGC
TATGTTGAGGAATAGATGGAAGGCGACGTGGTAGCACAGTTCACTGAAAT
CACCGGCTCAAAGCCAGAGCTGGCTACCCAGTATCTGCAGCTGACTGATT
TCAATATTGAGCAGGCCGTACAGCTTTTCTTCGAGAATGGCGGTGCGCCA
CTGACTGATGATCCCTTACCGTCGGCCTCCACGCCACAGCGAGCTTCTCA
TGCTGGCGGCTATGGAAATGAGTCTGGGGTAGTCAATGTTGACTCCGATG
ACGACGTCACAATAGATGAGTCTCGCTCTGCGCCTCGGAATCACCCATCG
CACGACGCTGTGTTTGAAGACGATGCAGCTATGGCCCGTCGCCTCCAAGA
AGAGATGTACGGCGGAGGAGATGCTGAAGAGAACGTGCGTGCGCCGATGG
CCCGTACAACAGAAACCTTGGTGGGGCCTGAAGCGGACTTTGACGACGGC
GATATGCATGCCAGCATATTGGGTCAACTGCGCGCGCGCCAGCAGCGAAC
CA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008033ATCC10864_008033Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008033-T1ATCC10864_008033-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008033-T1.cdsATCC10864_008033-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008033-T1.exon2ATCC10864_008033-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008033-T1.exon1ATCC10864_008033-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13899
PFAMPF14555
InterProIPR036249
InterProIPR029071
InterProIPR001012
PFAMPF00789
InterProIPR009060
InterProIPR006577
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000195supercontigMCQH01000195:141380..142998 -
Powered by Drupal