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ATCC10864_008047-T1, ATCC10864_008047-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008047-T1
Unique NameATCC10864_008047-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000195:177322..179517+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008047-T1 ID=ATCC10864_008047-T1|Name=ATCC10864_008047-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2196bp|location=Sequence derived from alignment at MCQH01000195:177322..179517+ (Aspergillus niger ATCC 10864)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTACCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000195:177322..179517+

>ATCC10864_008047-T1 ID=ATCC10864_008047-T1|Name=ATCC10864_008047-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2196bp|location=Sequence derived from alignment at MCQH01000195:177322..179517+ (Aspergillus niger ATCC 10864)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTACCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VRTR1ATCC10864_008047Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008047-T1.exon1ATCC10864_008047-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008047-T1.cdsATCC10864_008047-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008047-T1ATCC10864_008047-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
InterProIPR001138
PFAMPF04082
InterProIPR036864
InterProIPR007219
Properties
Property NameValue
ProductTranscription factor vrtR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000195supercontigMCQH01000195:177322..179517 +
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