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ATCC10864_008060-T1, ATCC10864_008060-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008060-T1
Unique NameATCC10864_008060-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:21571..23152-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008060-T1 ID=ATCC10864_008060-T1|Name=ATCC10864_008060-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1582bp|location=Sequence derived from alignment at MCQH01000196:21571..23152- (Aspergillus niger ATCC 10864)
ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTC
CCCCGCCTCCAGCACCACCACCGTTGCTGCCCTCTACCCGGAAACCGATC
TCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG
CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTC
CTTTACCTTCATCTCGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCA
GCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC
AGTGTCACCATCTTCCTCCTCGGCTATACCGTATGCTTCCCACTACACCA
TCAATCCCTCCCCACATCTAAAGCTATCCCCATACTAATGACCCCAGGTC
GGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCATCAC
TTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCC
TCGCCCCAAACCTTTCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGCATG
GGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCTCTT
TCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCT
TAATCGGCCCCGTCGTTGGCCCCATTGCGGGTGGCTTCATCGGCGAAACC
ATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCACCAT
CGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAA
TCCGCTGGAAAACAGCCAAGCTCGCACGCGAACTCAACCGTCCTGAGCTC
CGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTCTCA
AGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCC
CCATCGTCCTCCTCCTCTCCGTCTACATGGCCTTCGTCTACGGCCTCCTC
TACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGGCTT
CTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCT
TCATCGGCATGGCCGCCGTCGCAATGACGAGTGACCGCATGGTCATCAAA
CTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCCCAC
CATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCT
GGTCCGCTAAGTACGAGGCTATGTGGATCGTGCCGATCATTGGTATGGCG
CCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTACGT
GATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGG
CCACGAGATCGTTGGTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAGCTC
TTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTTGGC
GTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAA
TTCGCGAGAGGTGGGTTGTGAGGTTGGATTAG
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Coding sequence (CDS) from alignment at MCQH01000196:21571..23152-

>ATCC10864_008060-T1 ID=ATCC10864_008060-T1|Name=ATCC10864_008060-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3030bp|location=Sequence derived from alignment at MCQH01000196:21571..23152- (Aspergillus niger ATCC 10864)
GTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCAT
CACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCG
CCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGC
ATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCT
CTTTCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCC
CCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGTGGCTTCATCGGCGAA
ACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCAC
CATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCC
TAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAACTCAACCGTCCTGAG
CTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTC
TCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGA
GCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCCTTCGTCTACGGCCTC
CTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGG
CTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCT
TCTTCATCGGCATGGCCGCCGTCGCAATGACGAGTGACCGCATGGTCATC
AAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCC
CACCATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACG
GCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTGCCGATCATTGGTATG
GCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTA
CGTGATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGA
CGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAG
CTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTT
GGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGA
CAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAGATGCCCGATATTGAG
GATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCAC
CACCACCGTTGCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCA
TCGGCTGGGACAGTCAAGATGACCCCAGCAACCCGCAAAACTTTTCTCCG
AAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTC
GCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCG
ACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTCAGTGTCACCATCTTC
CTCCTCGGCTATACCGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAAT
CTACGGCCGCCGCATCACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCT
GGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTC
CGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGG
TGTCATCGCCGACCTCTTTCCCACCACCCAGCGCGGCATGGCCACCTCCA
TCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGT
GGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCT
CATCACCAGCGGCACCATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAA
CTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAA
CTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCAC
GCCCCCGACCGTCTCTCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCA
TCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCC
TTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTT
CGAAGGCGTCTACGGCTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAG
GTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCCGTCGCAATGACGAGT
GACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACC
CGAGATGCGTCTCCCCACCATGATCATCTTCGCCTGCTTCCTTCCTATCA
GCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTG
CCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATAT
GCCGATTCAGATGTACGTGATCGATTGTTATCCGGCGTATGCGGCGAGTG
CGAATGCCGCGTTGACGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCG
CTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTC
GTTGCTGGGGTTTTTGGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTA
ATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAG
ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTC
CCCCGCCTCCAGCACCACCACCGTTGCTGCCCTCTACCCGGAAACCGATC
TCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG
CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTC
CTTTACCTTCATCTCGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCA
GCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC
AGTGTCACCATCTTCCTCCTCGGCTATACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008060ATCC10864_008060Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008060-T1ATCC10864_008060-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008060-T1.cdsATCC10864_008060-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008060-T1.exon2ATCC10864_008060-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008060-T1.exon1ATCC10864_008060-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
PFAMPF07690
InterProIPR020846
InterProIPR005829
InterProIPR011701
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:21571..23152 -
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