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ATCC10864_008077-T1, ATCC10864_008077-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008077-T1
Unique NameATCC10864_008077-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:65853..66627-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008077-T1 ID=ATCC10864_008077-T1|Name=ATCC10864_008077-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=775bp|location=Sequence derived from alignment at MCQH01000196:65853..66627- (Aspergillus niger ATCC 10864)
ATGAAGCTCGTTTATCTCGGGGTAAGGAATGACGGATGTTATCTGTTCAT
CGTGTCGGCTGTCTGACCCCGTTCATCTGGACAGATTCTCCAAAATGCTC
AAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCG
CGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGAC
CGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAG
GCAAGTTGGCGTCCCTCGGGGTCGTCTTTTCACCCCCTCTGCGGCAGCCC
CTGACCGCCGGTCGCCTACAGATTTCACATTTCACGTCTACGCGCGAACC
CAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGC
TGCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACC
CGAACGCCGCCTCCTCCCGTTACCGGGTGCCCTTCCCCTCCCTCAAGACC
TACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGAT
TCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGA
GCGTATGTTCTGCGCGCATTACATGTGGGCAGAATGGTGCTAACTCCCCA
ACCAGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCG
GAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCA
GAATTCGTGCTGTGTGATCATGTGA
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Coding sequence (CDS) from alignment at MCQH01000196:65853..66627-

>ATCC10864_008077-T1 ID=ATCC10864_008077-T1|Name=ATCC10864_008077-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2352bp|location=Sequence derived from alignment at MCQH01000196:65853..66627- (Aspergillus niger ATCC 10864)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCC
AAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCT
GCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCC
GAACGCCGCCTCCTCCCGTTACCGGGTGCCCTTCCCCTCCCTCAAGACCT
ACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATT
CAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAG
CATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCG
ATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATG
ACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACA
GGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGC
GGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCA
GTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGA
TCATGTGAATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCG
GAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATC
CTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTC
CTCCCGTTACCGGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGT
ACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTG
GACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAA
TGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCT
ATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGT
AAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGA
GCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATT
GACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTT
CTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTT
CACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA
GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATG
CTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTTACCG
GGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC
ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAG
ATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCC
CGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCA
CCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCC
GAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGC
TCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTG
TCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGC
GAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTTCACATTTCACGT
CTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGT
ACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTC
CTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTTACCGGGTGCCCTTCCC
CTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCACACCAGGTGGATA
GCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCAT
AAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCT
CTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCG
TCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAA
CAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008077ATCC10864_008077Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008077-T1ATCC10864_008077-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008077-T1.cdsATCC10864_008077-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008077-T1.exon4ATCC10864_008077-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008077-T1.exon3ATCC10864_008077-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008077-T1.exon2ATCC10864_008077-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008077-T1.exon1ATCC10864_008077-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011012
PFAMPF13774
PFAMPF00957
InterProIPR010908
InterProIPR042855
InterProIPR001388
Properties
Property NameValue
NoteBUSCO:EOG09264CP4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:65853..66627 -
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