You are here

Home

ATCC10864_008100-T1, ATCC10864_008100-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008100-T1
Unique NameATCC10864_008100-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:129943..131705-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008100-T1 ID=ATCC10864_008100-T1|Name=ATCC10864_008100-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1763bp|location=Sequence derived from alignment at MCQH01000196:129943..131705- (Aspergillus niger ATCC 10864)
ATGAATGTGACGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCG
GCTCATCTCGCCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGC
TGCACCTCCGCATTCTCTCCATCCTCCACCCAGTCCGCCCATCCCAACTG
CTTCTTCCATTTGGGGCCAATGACTGGCGTCCTGTCCCCATCATGGAATA
CCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATCGCTGTTCG
GTACGTGCCCTTGGCGCACACCCCAAGCTATGTCAACGAACACTCGACTA
ACCCGCATCCCATCGCAGAGCTACTCGCCGAACAACAGCTGTCCGACCTT
TTGCCTCCCTCAATCCGATACATCCTTGCCGTCGCGACCCATCGCCATCC
ACGATATCTCCTTCGAATTCTCAACTCCTACGACGAGATCTACGCGCTGC
TCTCCCTCGTCGTCGAACGCTACTACCTGCGCACCTTCGGCGGCTCCTTC
ACAGAGAACTTCTACTCCCTCAAACGCGAACGAGTCCTCCTCACCAAGAA
TGGCGAGATCCCTCGTGCCCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAG
CCCTCAAGCTCCGCACCTCAGACGTCTGGAAGAACCTCCTCGTCCTAGTC
GGAATTCCCTACCTAAAGCGCAAGCTCGACGAAGGCTACGACATCCACGC
CGCACCACAAGCATCCCTAATTATGAGCGGTGGCCCTCGATACAACCCAG
GCGATGACCTCCCTCATAATCCAACAATCCGCCAACGTCTCCTCCACTAC
TACAAGTGGTTCCTCCGCAACATCTACCCCTCCGTCAACGCCGCATACTA
CTTCTCCATCCTCGCCTTCAACCTCGCCTACCTCTTCGACAACACAAAAT
ACTCCTCCCCCTTCCTCTGGCTCATCGGCACCCGCATCCGTCGTCTCAGC
TCCGCCGACCACCGCGCCATCGCCTCCATCCTCGACCCCAAGCCCCCTCC
CCCAGGTCCCGGTGGCGCAGGCGCCCGCACCCGCCCTGGCTCCGGCCTCC
TGGGCCTCCTCAGCCCGCAGAACTTCTACCCCCAACTTCTCACCTCTCTC
CGCTACTTCCTCCCAGCTTCCATCTTCGCCCTCAAGTTCCTCGAATGGTG
GCACGCAAGTGACTTCTCGCGCCAGCTCGCCCGCAAAGCAACCGAGGTCC
TGGACCTTCCTGCCCCTGTCGCAGCGGGAATGACGCCTCCCTCGGAGAAG
CGAAAGGCAGCCGCCGCGGCCGCAGCCACAGAGAAACAACAACAGCAACA
GCCATCATCCCCAACCCTCAAATCAGCATTGAAATCAGCCCCTCCCGTGC
GCACACGCATCCAACCGCCCATCTCGGCTACCTCGTATCTACCCATCTTC
ACTGTTCCACTTCCCCCGCCGGAATCGGATGTCGCGTCCGCGTGCCCGAT
CTGTTTGAATGCGCTTACGAACCCTACGGCGTGTCAGACGGGGTATGTTT
TTTGCTACGTGTGTATCTTCCACTGGTTGAATGGGGAGCATCAGCGGCAA
TTGGATTTCATGAATGGGGAGGGTGCGGGCGCTGCGTGGGCCGATGATGA
TTTGGAGGGGGGTGAGGAAGTGAAACAGGGTGATGATGATGAGGAGGAGA
TGAAGGAGTCGAGGAGTAGACGGGGGAAGTGGGAGAGTGGGAAGGGAAGG
TGTCCGGTTACGGGGAGAAGGGTACTTGGTGGGACGGAGGGGTTGAGGAG
GGTGTTGGTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000196:129943..131705-

>ATCC10864_008100-T1 ID=ATCC10864_008100-T1|Name=ATCC10864_008100-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3390bp|location=Sequence derived from alignment at MCQH01000196:129943..131705- (Aspergillus niger ATCC 10864)
AGCTACTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAATCCGA
TACATCCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTCGAAT
TCTCAACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTCGAAC
GCTACTACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTACTCC
CTCAAACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTCGTGC
CCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGCACCT
CAGACGTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCTAAAG
CGCAAGCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCATCCCT
AATTATGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCTCATA
ATCCAACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCTCCGC
AACATCTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCGCCTT
CAACCTCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTCCTCT
GGCTCATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCGCGCC
ATCGCCTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTGGCGC
AGGCGCCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGCCCGC
AGAACTTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCCAGCT
TCCATCTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACTTCTC
GCGCCAGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCCCCTG
TCGCAGCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGCCGCCGCG
GCCGCAGCCACAGAGAAACAACAACAGCAACAGCCATCATCCCCAACCCT
CAAATCAGCATTGAAATCAGCCCCTCCCGTGCGCACACGCATCCAACCGC
CCATCTCGGCTACCTCGTATCTACCCATCTTCACTGTTCCACTTCCCCCG
CCGGAATCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGCTTAC
GAACCCTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGTATCT
TCCACTGGTTGAATGGGGAGCATCAGCGGCAATTGGATTTCATGAATGGG
GAGGGTGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGGGGTGAGGA
AGTGAAACAGGGTGATGATGATGAGGAGGAGATGAAGGAGTCGAGGAGTA
GACGGGGGAAGTGGGAGAGTGGGAAGGGAAGGTGTCCGGTTACGGGGAGA
AGGGTACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGATGAA
TGTGACGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCGGCTCA
TCTCGCCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGCTGCAC
CTCCGCATTCTCTCCATCCTCCACCCAGTCCGCCCATCCCAACTGCTTCT
TCCATTTGGGGCCAATGACTGGCGTCCTGTCCCCATCATGGAATACCTGC
CTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATCGCTGTTCGAGCTA
CTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAATCCGATACAT
CCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTCGAATTCTCA
ACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTCGAACGCTAC
TACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTACTCCCTCAA
ACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTCGTGCCCAGC
TGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGCACCTCAGAC
GTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCTAAAGCGCAA
GCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCATCCCTAATTA
TGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCTCATAATCCA
ACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCTCCGCAACAT
CTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCGCCTTCAACC
TCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTCCTCTGGCTC
ATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCGCGCCATCGC
CTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTGGCGCAGGCG
CCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGCCCGCAGAAC
TTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCCAGCTTCCAT
CTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACTTCTCGCGCC
AGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCCCCTGTCGCA
GCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGCCGCCGCGGCCGC
AGCCACAGAGAAACAACAACAGCAACAGCCATCATCCCCAACCCTCAAAT
CAGCATTGAAATCAGCCCCTCCCGTGCGCACACGCATCCAACCGCCCATC
TCGGCTACCTCGTATCTACCCATCTTCACTGTTCCACTTCCCCCGCCGGA
ATCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGCTTACGAACC
CTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGTATCTTCCAC
TGGTTGAATGGGGAGCATCAGCGGCAATTGGATTTCATGAATGGGGAGGG
TGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGGGGTGAGGAAGTGA
AACAGGGTGATGATGATGAGGAGGAGATGAAGGAGTCGAGGAGTAGACGG
GGGAAGTGGGAGAGTGGGAAGGGAAGGTGTCCGGTTACGGGGAGAAGGGT
ACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGATGAATGTGA
CGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCGGCTCATCTCG
CCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGCTGCACCTCCG
CATTCTCTCCATCCTCCACCCAGTCCGCCCATCCCAACTGCTTCTTCCAT
TTGGGGCCAATGACTGGCGTCCTGTCCCCATCATGGAATACCTGCCTAGT
CTGCAGCAAGAATTCGATGAGCTGAAGCCATCGCTGTTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0008022protein C-terminus binding
Vocabulary: Biological Process
TermDefinition
GO:0006625protein targeting to peroxisome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PEX12ATCC10864_008100Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008100-T1ATCC10864_008100-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008100-T1.cdsATCC10864_008100-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008100-T1.exon2ATCC10864_008100-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008100-T1.exon1ATCC10864_008100-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001841
PFAMPF04757
InterProIPR017375
InterProIPR013083
InterProIPR006845
Properties
Property NameValue
Productubiquitin-protein ligase peroxin 12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:129943..131705 -
Powered by Drupal