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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000196:134163..135837+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_008102-T1 ID=ATCC10864_008102-T1|Name=ATCC10864_008102-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1675bp|location=Sequence derived from alignment at MCQH01000196:134163..135837+ (Aspergillus niger ATCC 10864) ATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCAAGA
TCAGATCGCTGCGACGTGAGTTACCCCGCAAATTAAAAGAAAATTTCTCT
ATAAACATACACGAGGGGCAGTATGATCGAGGACTTCAACTAACAAATGT
GCTTAATAGTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATGGAACAA
CATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTTGATATC
TCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTGCGA
GCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAATCGA
AGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAGGTT
CGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAAGCGTAT
TAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCATTGTGC
AGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGCCCTGAC
TGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCAGCTGCG
CCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAATCATCC
TCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCCAAGGAC
GGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGATGGTCGA
GTTCCTCTCCTCCGTTGTCCCCACCAAGGTCAAGAAGTCGCAGGAGCTTA
TCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACCTTCTCG
ATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCCCATCAA
ACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCTACCGCG
TCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACCGCCGAT
GTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGCCGATGT
GACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTGGACGGT
CGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCGGAT
CTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGGTGGAGT
ACTCCACGTCGGTGACTCTGTTCTCGGTTATCACCTGACTGGTACCAATT
TTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGCTCC
GCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAAGAA
GAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGTACGAGG
AGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAAGCC
GAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGATGTTGA
AGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCACGGAACC
GTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGCGAAGAT
GATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTTTGACGA
GTTGAACATGGACGATGACCATTAA back to topCoding sequence (CDS) from alignment at MCQH01000196:134163..135837+ >ATCC10864_008102-T1 ID=ATCC10864_008102-T1|Name=ATCC10864_008102-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3162bp|location=Sequence derived from alignment at MCQH01000196:134163..135837+ (Aspergillus niger ATCC 10864) ATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCAAGA TCAGATCGCTGCGACTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATG GAACAACATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTT GATATCTCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGA CTGCGAGCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCG AATCGAAGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCC AAGGTTCGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAA GCGTATTAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCA TTGTGCAGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGC CCTGACTGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCA GCTGCGCCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAA TCATCCTCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCC AAGGACGGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGAT GGTCGAGTTCCTCTCCTCCGTTGTCCCCACCAAGGTCAAGAAGTCGCAGG AGCTTATCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACC TTCTCGATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCC CATCAAACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCT ACCGCGTCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACC GCCGATGTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGC CGATGTGACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTG GACGGTCGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCC TCGGATCTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGG TGGAGTACTCCACGTCGGTGACTCTGTTCTCGGTTATCACCTGACTGGTA CCAATTTTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTAC AGCTCCGCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAA GAAGAAGAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGT ACGAGGAGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAG GAAGCCGAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGA TGTTGAAGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCAC GGAACCGTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGC GAAGATGATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTT TGACGAGTTGAACATGGACGATGACCATTAAATGTCGATGGACCTGGATG CGCCGGTGCCTTTCGAGGCCATCCCGCAAGATCAGATCGCTGCGACTATC CTTTGTTGCAACTGTGGCGCGCCCATCGATGGAACAACATCCGCAGGCGC CCTTTGCCAGGACTGTGTGAAATTGACGGTTGATATCTCCCAGGGCATCC AGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTGCGAGCGGTGGCTTCAA CCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAATCGAAGGAACTCCTCGC ACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAGGTTCGCATTATCGATG CCAGCTTCATCTGGACCGAACCCCACTCGAAGCGTATTAAGGTCAAGATC ACCATCCAGCAGGAGGCATTCCAGGGCACCATTGTGCAGCAGACTTTCGA GGTTGAATACGTTGTCGCCTCGCTACAATGCCCTGACTGCAAGAAGTCGT TCACTGTCAACACTTGGAACTCCAGCATTCAGCTGCGCCAGAAGGTGCCT CACAAGCGAACCTTCTTGTACCTTGAGCAAATCATCCTCAAGCACAACGC TCACCGCGATACAATCAACATCAAGGAGGCCAAGGACGGTTTGGATTTCT ACTTTGCGCAGAGGAATCATGCGGAGAAGATGGTCGAGTTCCTCTCCTCC GTTGTCCCCACCAAGGTCAAGAAGTCGCAGGAGCTTATCTCCATGGATAT TCACACCTCCACGAAGTCATACAAGTTCACCTTCTCGATTGAATTGATCC CTATCTGCAAGGATGATTTGGTTGCGCTGCCCATCAAACTTGCCAGATCA CTGGGCAACATCTCGCCCCTGGCCCTCTGCTACCGCGTCGGTACCTCTGT CAACCTTCTCGACCCCAACACGCTCCAGACCGCCGATGTCCCGACAAACA CCTACTGGAGATCACCCTTCAGGAGTCTTGCCGATGTGACGGAGCTGACC GAGTTCATCATCATGGATATTGAGCTGGTTGGACGGTCGAACGGACGGTT CTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCGGATCTTGGCTCGAACG ATCAAACCTATTTCACCCGCACCCACCTGGGTGGAGTACTCCACGTCGGT GACTCTGTTCTCGGTTATCACCTGACTGGTACCAATTTTAACGACCCCAA CTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGCTCCGCGATTCCCGACG TTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAAGAAGAACAAGAACCGC AACTGGCGTCTTAAGCGCATGGCTCTTGAGTACGAGGAGGAGGCGGCCCA GCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAAGCCGAGCGCAACCGCC TTGAAGAGGACTTTGAGATGTTCTTGCGCGATGTTGAAGAGGATCAGGAA TTGCGTGGCACTCTTGATCTGTACAAGGCACGGAACCGTGCCCCCGTGGA GCACGGTGGTATGGATATGGATGAGGATAGCGAAGATGATGAGGTGCCCA AGATCAACATGGATGAGCTGCTTGATGACTTTGACGAGTTGAACATGGAC GATGACCATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0043023 | ribosomal large subunit binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Database | Accession |
InterPro | IPR039768 |
PFAM | PF04981 |
InterPro | IPR007064 |
Properties
Property Name | Value |
Note | BUSCO:EOG09262CA4 |
Product | ribosome-binding protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
MCQH01000196 | supercontig | MCQH01000196:134163..135837 + |
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