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ATCC10864_008113-T1, ATCC10864_008113-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008113-T1
Unique NameATCC10864_008113-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:171383..173911+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008113-T1 ID=ATCC10864_008113-T1|Name=ATCC10864_008113-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2529bp|location=Sequence derived from alignment at MCQH01000196:171383..173911+ (Aspergillus niger ATCC 10864)
ATGCCCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCC
GGCAGACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATT
ATGGCGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCT
GATGCGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATC
AGGGGTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCA
ATCCGTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGC
AAGAAACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGA
AGGCCTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTG
AAGACTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAA
AATCCCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTT
CTTGGCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTG
TTGGCTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACAT
CCCCAGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGAC
GAGGGAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGA
TCGAAGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAA
ATCCGCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGA
CCTGTTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGT
GTGCACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGC
GATTATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCT
CCCCTACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGA
ACATCACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATA
AATGATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGA
CTTGTCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCG
AACAATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTC
GATGGCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTAC
CCCTCTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTC
CCTACCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCG
ATATCGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGG
TCCCGCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGC
TCGTCTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAAT
GTCTACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTT
GCGGGATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAA
TCACCGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGT
ACACGGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGC
GAGCCTGGGCCAGTCTGCCACGCCAGAGCCACATAACGAGGCAAGAGCTG
CGAGTCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGAT
AAGCTGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCT
CGCGCATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAAC
CAGCCTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCC
ATGGCTCCGCCCGCCGCTCCCCAACCTGAAGCCCGTGTACCCAGCGTTCC
TCCTCCCGGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATG
CTCCTCATCCCCCTCAGCCAGGAGTCCCCGGGGTGAGTAACTAACGACCT
ATTACTTCCATCTCGTCACCTCCATACGGGCCGCAATGTCTGGCTACCGA
AGAAGTGCCGCAGACAGCCACATACTAACATGATTTTATTTAGCCCCCGC
CGCCAAGTTGGCTTGCAGCGGGACTCGCACGCTTAAAACTCTCCTATCCC
AACGACTCTTTCGAGGGGGTCATGCGCTACACCGCTGTTGACACGGAAAC
CATGCTGCCGGTAGCGAACTCCAACAGTCAACCCGGCCACAAGCTGAAGT
ATCAGTATCTCCCTCGTATTCGCTGTCACGACTGTCCGGGTAAGCTGTAC
ACTCCAGGACCCGGCACAACAGTCGACAATTTCGAAGTACATCTCCGGAA
CCGCCAACACAAAGAACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCCG
TAGCCGCAGCTGGGGCCAACGCAGCATAG
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Coding sequence (CDS) from alignment at MCQH01000196:171383..173911+

>ATCC10864_008113-T1 ID=ATCC10864_008113-T1|Name=ATCC10864_008113-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4836bp|location=Sequence derived from alignment at MCQH01000196:171383..173911+ (Aspergillus niger ATCC 10864)
ATGCCCTCGCCCGACCTCTCTCAGCCTGGACAGCTCCCAATTGACGCCCC
GGCAGACCAAGGACAGATTGGCTCAGGGATGTCTAACATAAGCGGGGATT
ATGGCGCCGTCGCGTCCGAGACTTCCTCGGGACAAGGTTCGGGCGGATCT
GATGCGATTGCCGAGGGAAAGCAGAATGCGAAGGCTGTTCTCGCCGCATC
AGGGGTGTCTCTAGGCTCTACCGAATTCGCTCATGACGCGTCGAATGGCA
ATCCGTCGCCATCGTCTCAGGCGAACAGTGCCAATGGATCCGCGTCGAGC
AAGAAACGATCCCGGGATGGCTCTGTTATAAACTCCTCCCAATCGACAGA
AGGCCTTCCCGTACGTGTACGCGAGACACCTGCCGATAAGATTCTTCTTG
AAGACTATGTCAACCGGGAATTCCACCATTCTGCGTTGACAGCATGGCAA
AATCCCAGCCAGGAGCTTTTGCATCAGAAACGCGCTGAGCGCGATTATTT
CTTGGCCGTACGGCGCGAGAACCACATGAACCCAGCAGCTCTATATGGTG
TTGGCTACGAAGGCTTCGGCAATCAGCGTACCGACTTGCGGAATCAACAT
CCCCAGTTATTATATCCCGCGAATCGACGTCGTCCCGGGAACCGGCGGAC
GAGGGAACTCCGAATCTCCCGCAAGGATCTAAAGACCCAGAATGAACAGA
TCGAAGATTTAGTGCCAATCCGCTTGGATATCGACTGGGAAAAGATCAAA
ATCCGCGATACTTTCACGTGGAATCTTCATGATCGCGTGGTTTCACCTGA
CCTGTTCGCAGAGAAGCTCGTAGAGGATCTACAGATCCCTCCCGAGTCGT
GTGCACCGCTGATACGGATGATCTCTTCAAGTATCCAAGAGCAGCTTTGC
GATTATTATCCTCAAATCTTCATGGAAGAAGAGCCGCTGGATCCTCACCT
CCCCTACAGCGCCTACAAGAATGATGAGATGCGCATTCTAGTGAAATTGA
ACATCACGATTGGCCAACATACTCTGATTGACCAGTTTGAATGGGATATA
AATGATCCTCACAACTCTCCCGAGGAGTTTGCTGAGCGTATGACCGACGA
CTTGTCTCTTTCCGGCGAATTTACGACTGCAATTGCTCACTCGATTCGCG
AACAATCACAACTTTTCACCAAATCCCTCTATATCCTCTCCCACCCCTTC
GATGGCCGTCCGATCGATGATCCTGATCTGAAGACCGCGTTCCTCCCTAC
CCCTCTGACCTCTTCCTTCCGACCTTTCCAGGCGGCAAAGGAGTTCACTC
CCTACCTATACGAATTGAATGAAACGGAGCTCGAGCGGACTGAGGTGTCG
ATATCGCGAGATCAACGCCGACAGAAGCGGTCTGTTAACCGTCGTGGTGG
TCCCGCACTGCCTGACCTCAAGGATCGTCAACGCACTATCCGGACCATGC
TCGTCTCGACAGTCATACCCAACTGTGCAGCGTCCCTGGAGGATAGCAAT
GTCTACAAGCGGTCGGGCTCGAGCCGTTCCAGGCGCGCCGCCGTCGGCTT
GCGGGATACCGGAGAGGAGTCAGAGGAGTCTGACAGCGACGAATCGTCAA
TCACCGGCTCACCTGCTATCGGGCCTCACCTAGCTCAAGGAACGGCGCGT
ACACGGGGCATGAGAGGAGCTGCCAGCGCGGCACATGCGGCACTTCGAGC
GAGCCTGGGCCAGTCTGCCACGCCAGAGCCACATAACGAGGCAAGAGCTG
CGAGTCGCAGGCGCGAGATTCGCGAGGAGAGCGTTGTTGAAGAGCCGGAT
AAGCTGCTTGTCAAGCTCAAGATCTCCAAGGAGAAGTTCCGGCAATTCCT
CGCGCATGGCTTGCAGTCAATACAAGGCCTTGCGACCCCGGCAGCGCAAC
CAGCCTCGCAGCAGAGCACACCCCAAGTTCAGACTCCTACCCCGAACCCC
ATGGCTCCGCCCGCCGCTCCCCAACCTGAAGCCCGTGTACCCAGCGTTCC
TCCTCCCGGACAACGACCAGTTCCCGCTCAACAGATCGGAGCCGTAGATG
CTCCTCATCCCCCTCAGCCAGGAGTCCCCGGGCCCCCGCCGCCAAGTTGG
CTTGCAGCGGGACTCGCACGCTTAAAACTCTCCTATCCCAACGACTCTTT
CGAGGGGGTCATGCGCTACACCGCTGTTGACACGGAAACCATGCTGCCGG
TAGCGAACTCCAACAGTCAACCCGGCCACAAGCTGAAGTATCAGTATCTC
CCTCGTATTCGCTGTCACGACTGTCCGGGTAAGCTGTACACTCCAGGACC
CGGCACAACAGTCGACAATTTCGAAGTACATCTCCGGAACCGCCAACACA
AAGAACGGGTGGAAGAACGAGTTGCGAAAACAGCAGCCGTAGCCGCAGCT
GGGGCCAACGCAGCATAGATGCCCTCGCCCGACCTCTCTCAGCCTGGACA
GCTCCCAATTGACGCCCCGGCAGACCAAGGACAGATTGGCTCAGGGATGT
CTAACATAAGCGGGGATTATGGCGCCGTCGCGTCCGAGACTTCCTCGGGA
CAAGGTTCGGGCGGATCTGATGCGATTGCCGAGGGAAAGCAGAATGCGAA
GGCTGTTCTCGCCGCATCAGGGGTGTCTCTAGGCTCTACCGAATTCGCTC
ATGACGCGTCGAATGGCAATCCGTCGCCATCGTCTCAGGCGAACAGTGCC
AATGGATCCGCGTCGAGCAAGAAACGATCCCGGGATGGCTCTGTTATAAA
CTCCTCCCAATCGACAGAAGGCCTTCCCGTACGTGTACGCGAGACACCTG
CCGATAAGATTCTTCTTGAAGACTATGTCAACCGGGAATTCCACCATTCT
GCGTTGACAGCATGGCAAAATCCCAGCCAGGAGCTTTTGCATCAGAAACG
CGCTGAGCGCGATTATTTCTTGGCCGTACGGCGCGAGAACCACATGAACC
CAGCAGCTCTATATGGTGTTGGCTACGAAGGCTTCGGCAATCAGCGTACC
GACTTGCGGAATCAACATCCCCAGTTATTATATCCCGCGAATCGACGTCG
TCCCGGGAACCGGCGGACGAGGGAACTCCGAATCTCCCGCAAGGATCTAA
AGACCCAGAATGAACAGATCGAAGATTTAGTGCCAATCCGCTTGGATATC
GACTGGGAAAAGATCAAAATCCGCGATACTTTCACGTGGAATCTTCATGA
TCGCGTGGTTTCACCTGACCTGTTCGCAGAGAAGCTCGTAGAGGATCTAC
AGATCCCTCCCGAGTCGTGTGCACCGCTGATACGGATGATCTCTTCAAGT
ATCCAAGAGCAGCTTTGCGATTATTATCCTCAAATCTTCATGGAAGAAGA
GCCGCTGGATCCTCACCTCCCCTACAGCGCCTACAAGAATGATGAGATGC
GCATTCTAGTGAAATTGAACATCACGATTGGCCAACATACTCTGATTGAC
CAGTTTGAATGGGATATAAATGATCCTCACAACTCTCCCGAGGAGTTTGC
TGAGCGTATGACCGACGACTTGTCTCTTTCCGGCGAATTTACGACTGCAA
TTGCTCACTCGATTCGCGAACAATCACAACTTTTCACCAAATCCCTCTAT
ATCCTCTCCCACCCCTTCGATGGCCGTCCGATCGATGATCCTGATCTGAA
GACCGCGTTCCTCCCTACCCCTCTGACCTCTTCCTTCCGACCTTTCCAGG
CGGCAAAGGAGTTCACTCCCTACCTATACGAATTGAATGAAACGGAGCTC
GAGCGGACTGAGGTGTCGATATCGCGAGATCAACGCCGACAGAAGCGGTC
TGTTAACCGTCGTGGTGGTCCCGCACTGCCTGACCTCAAGGATCGTCAAC
GCACTATCCGGACCATGCTCGTCTCGACAGTCATACCCAACTGTGCAGCG
TCCCTGGAGGATAGCAATGTCTACAAGCGGTCGGGCTCGAGCCGTTCCAG
GCGCGCCGCCGTCGGCTTGCGGGATACCGGAGAGGAGTCAGAGGAGTCTG
ACAGCGACGAATCGTCAATCACCGGCTCACCTGCTATCGGGCCTCACCTA
GCTCAAGGAACGGCGCGTACACGGGGCATGAGAGGAGCTGCCAGCGCGGC
ACATGCGGCACTTCGAGCGAGCCTGGGCCAGTCTGCCACGCCAGAGCCAC
ATAACGAGGCAAGAGCTGCGAGTCGCAGGCGCGAGATTCGCGAGGAGAGC
GTTGTTGAAGAGCCGGATAAGCTGCTTGTCAAGCTCAAGATCTCCAAGGA
GAAGTTCCGGCAATTCCTCGCGCATGGCTTGCAGTCAATACAAGGCCTTG
CGACCCCGGCAGCGCAACCAGCCTCGCAGCAGAGCACACCCCAAGTTCAG
ACTCCTACCCCGAACCCCATGGCTCCGCCCGCCGCTCCCCAACCTGAAGC
CCGTGTACCCAGCGTTCCTCCTCCCGGACAACGACCAGTTCCCGCTCAAC
AGATCGGAGCCGTAGATGCTCCTCATCCCCCTCAGCCAGGAGTCCCCGGG
CCCCCGCCGCCAAGTTGGCTTGCAGCGGGACTCGCACGCTTAAAACTCTC
CTATCCCAACGACTCTTTCGAGGGGGTCATGCGCTACACCGCTGTTGACA
CGGAAACCATGCTGCCGGTAGCGAACTCCAACAGTCAACCCGGCCACAAG
CTGAAGTATCAGTATCTCCCTCGTATTCGCTGTCACGACTGTCCGGGTAA
GCTGTACACTCCAGGACCCGGCACAACAGTCGACAATTTCGAAGTACATC
TCCGGAACCGCCAACACAAAGAACGGGTGGAAGAACGAGTTGCGAAAACA
GCAGCCGTAGCCGCAGCTGGGGCCAACGCAGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008113ATCC10864_008113Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008113-T1.exon1ATCC10864_008113-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008113-T1.exon2ATCC10864_008113-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008113-T1.cdsATCC10864_008113-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008113-T1ATCC10864_008113-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006939
PFAMPF04855
Properties
Property NameValue
NoteBUSCO:EOG0926115P
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:171383..173911 +
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