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ATCC10864_008118-T1, ATCC10864_008118-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008118-T1
Unique NameATCC10864_008118-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:189076..189720-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008118-T1 ID=ATCC10864_008118-T1|Name=ATCC10864_008118-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=645bp|location=Sequence derived from alignment at MCQH01000196:189076..189720- (Aspergillus niger ATCC 10864)
ATGACGAAGCGCACCAAGAGTATGTGCCCCTTTTGAACCTCTACTGGAGG ACCGATGAACTCTTGAATGAATGAACGATGAATCGCGAGACTAACAATTA TTGCAGAGGTCGGTATCACGGGTAAATATGGTACCAGGTATGCAGCCACG CTTTTCCACCACGACGGTTTGAAATCGGGATGAAGTCGATCGCGTTTTTA TTCTCCGAAAATCGAAGACGACAGATTCAGCCTTGAATTTCGCCATACAG AAGAATCGATATTGACGATGGTTTGATAATAGATACGGTGCCTCCCTGCG TAAGCAGGTGAAGAAGATGGAAGTGTCCCAGCACGCCCGTTACATCTGCA CCTTCTGCGGAAAGAACACCGTCAAGCGCAAGGCTGTTGGTATCTGGGAG TGCAAGGGCTGCAACAAGACTGTTGCCGGTGGTGCCTACACTGTCTCGTA AGTACCGAATCTGCTGCTGCTGCTGCTTTCGATAAGCTGCGTCCTGGGCC CAGTGCAGTCTCCATCTATACGGACTGGGGCCTCAAGAAGCGGACGTGAC ATGGATGCTAATCGCTCGGGTTGTGTTACAGTACCCCCGCCGCTGCCGCC ACTCGCTCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTAG
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Coding sequence (CDS) from alignment at MCQH01000196:189076..189720-

>ATCC10864_008118-T1 ID=ATCC10864_008118-T1|Name=ATCC10864_008118-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1116bp|location=Sequence derived from alignment at MCQH01000196:189076..189720- (Aspergillus niger ATCC 10864)
TACCCCCGCCGCTGCCGCCACTCGCTCCACTATCCGTCGTCTCAGAGAAA
TCGCGGAGGTTTAGATACGGTGCCTCCCTGCGTAAGCAGGTGAAGAAGAT
GGAAGTGTCCCAGCACGCCCGTTACATCTGCACCTTCTGCGGAAAGAACA
CCGTCAAGCGCAAGGCTGTTGGTATCTGGGAGTGCAAGGGCTGCAACAAG
ACTGTTGCCGGTGGTGCCTACACTGTCTCAGGTCGGTATCACGGGTAAAT
ATGGTACCAGATGACGAAGCGCACCAAGATACCCCCGCCGCTGCCGCCAC
TCGCTCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTAGATACGGT
GCCTCCCTGCGTAAGCAGGTGAAGAAGATGGAAGTGTCCCAGCACGCCCG
TTACATCTGCACCTTCTGCGGAAAGAACACCGTCAAGCGCAAGGCTGTTG
GTATCTGGGAGTGCAAGGGCTGCAACAAGACTGTTGCCGGTGGTGCCTAC
ACTGTCTCAGGTCGGTATCACGGGTAAATATGGTACCAGATGACGAAGCG
CACCAAGATACCCCCGCCGCTGCCGCCACTCGCTCCACTATCCGTCGTCT
CAGAGAAATCGCGGAGGTTTAGATACGGTGCCTCCCTGCGTAAGCAGGTG
AAGAAGATGGAAGTGTCCCAGCACGCCCGTTACATCTGCACCTTCTGCGG
AAAGAACACCGTCAAGCGCAAGGCTGTTGGTATCTGGGAGTGCAAGGGCT
GCAACAAGACTGTTGCCGGTGGTGCCTACACTGTCTCAGGTCGGTATCAC
GGGTAAATATGGTACCAGATGACGAAGCGCACCAAGATACCCCCGCCGCT
GCCGCCACTCGCTCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTA
GATACGGTGCCTCCCTGCGTAAGCAGGTGAAGAAGATGGAAGTGTCCCAG
CACGCCCGTTACATCTGCACCTTCTGCGGAAAGAACACCGTCAAGCGCAA
GGCTGTTGGTATCTGGGAGTGCAAGGGCTGCAACAAGACTGTTGCCGGTG
GTGCCTACACTGTCTCAGGTCGGTATCACGGGTAAATATGGTACCAGATG
ACGAAGCGCACCAAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL43AATCC10864_008118Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008118-T1ATCC10864_008118-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008118-T1.cdsATCC10864_008118-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008118-T1.exon4ATCC10864_008118-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008118-T1.exon3ATCC10864_008118-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008118-T1.exon2ATCC10864_008118-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008118-T1.exon1ATCC10864_008118-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002674
PFAMPF01780
InterProIPR011332
InterProIPR011331
Properties
Property NameValue
Product60S ribosomal protein L43A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:189076..189720 -