You are here

Home

ATCC10864_008121-T1, ATCC10864_008121-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008121-T1
Unique NameATCC10864_008121-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:194563..195768-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008121-T1 ID=ATCC10864_008121-T1|Name=ATCC10864_008121-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1206bp|location=Sequence derived from alignment at MCQH01000196:194563..195768- (Aspergillus niger ATCC 10864)
ATGACCGAAGGGTATATATTACTTCGCCGCCTACCCTGACTACCTTTCTA
TACAAGAAACATCCCTGCTAACATGGGACATTTGCATGACAATACAGAAC
TCTCGCGTCGGCCGTCGCCCTCCCCGATCAAGACACTATAATCCCGTCCC
CAGAAGCAGGGCTAAAGCGGCGACAATCGTCAATTACGGACCCCGACTCG
GAGAACAAACGCCGTTGTCTTAGCTCACAGGCAGAACATCACGACGACAC
CCAGTCCATTCCAGATCGCAAACAGTCCTCGCCAGATGTAACAGAGCGGA
AACCGCGACGTGGCGCAGGACGGGATGAGGAGCGCAAACGCGGCCAACGA
CTATTCGGTGCTTTGCTGGGGACGCTTTCGCAGAGCTCGAGCTCGGCGGC
CCAAAAGCGACGTGCGGATATTGAGCGACGACAACAGGATAAGTTGAAGT
TGCAGGATGAGGAGTATGGGGAGCTGAAGAAGAAGAGACGGGAGGAACGG
GCGGCGATTCGGAAGAAGGAGCAGAGGTTCTACGAGGAGGAATCGGTGAG
TTTTGTCCCCCGGGAATGATGATGGCGATGATTTGCTGGGTTTCTGGTTG
CTGCTCGTTTTATGTCGTGCAGGCGCTGATGGATGTCTCAGATGCGCACG
CGCCACTCGAATATGATTGCGATGGCTCATTTCCTTAAGACGAGGACGGA
GCCTGTATTAGTATGTTTACCAACCTTACGGTTTTGTGGCGTTGGTGCTT
ACGTTTGGGGGGTTCTAATTCTATCTGCAGTACTACAAGCCGTGGCAGCT
AAGGGCGGAGGATGAGGATATAATACAGGACCAGATTAAAGAAGCGGAAG
CTACTGTCGCGAGAGAAGTGGCGGAGTTTGAAGCACGCTATTCGTCCCCC
GAGGAGGAAAATGCCAAGCAGCAGGAGGAGAAGAAACAGGAGTCAGGGCA
TGAAGAGACTCAGGAACCAGCCTCGGTGTCCGAAACAGACGCCCTGGAGA
ACAAGAGTGTCGCTCAAGCGTCTTCGGTCACGCTGGGAGCCGAGACGACA
GCCGATGGAGGTTCAGAAGAAGCGAAAGCCGAGACCACGCTTGCTAATGA
CAGCAACGTATCTACTAGTATGGACCATGACCGCTCGGATATCCATCGAC
ACGACGATGATGGCGGTGAAGTGGAAGAGGATCAGGAAGATACGGTAATC
TACTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000196:194563..195768-

>ATCC10864_008121-T1 ID=ATCC10864_008121-T1|Name=ATCC10864_008121-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3816bp|location=Sequence derived from alignment at MCQH01000196:194563..195768- (Aspergillus niger ATCC 10864)
TACTACAAGCCGTGGCAGCTAAGGGCGGAGGATGAGGATATAATACAGGA
CCAGATTAAAGAAGCGGAAGCTACTGTCGCGAGAGAAGTGGCGGAGTTTG
AAGCACGCTATTCGTCCCCCGAGGAGGAAAATGCCAAGCAGCAGGAGGAG
AAGAAACAGGAGTCAGGGCATGAAGAGACTCAGGAACCAGCCTCGGTGTC
CGAAACAGACGCCCTGGAGAACAAGAGTGTCGCTCAAGCGTCTTCGGTCA
CGCTGGGAGCCGAGACGACAGCCGATGGAGGTTCAGAAGAAGCGAAAGCC
GAGACCACGCTTGCTAATGACAGCAACGTATCTACTAGTATGGACCATGA
CCGCTCGGATATCCATCGACACGACGATGATGGCGGTGAAGTGGAAGAGG
ATCAGGAAGATACGGTAATCTACTAGATGCGCACGCGCCACTCGAATATG
ATTGCGATGGCTCATTTCCTTAAGACGAGGACGGAGCCTGTATTAAACTC
TCGCGTCGGCCGTCGCCCTCCCCGATCAAGACACTATAATCCCGTCCCCA
GAAGCAGGGCTAAAGCGGCGACAATCGTCAATTACGGACCCCGACTCGGA
GAACAAACGCCGTTGTCTTAGCTCACAGGCAGAACATCACGACGACACCC
AGTCCATTCCAGATCGCAAACAGTCCTCGCCAGATGTAACAGAGCGGAAA
CCGCGACGTGGCGCAGGACGGGATGAGGAGCGCAAACGCGGCCAACGACT
ATTCGGTGCTTTGCTGGGGACGCTTTCGCAGAGCTCGAGCTCGGCGGCCC
AAAAGCGACGTGCGGATATTGAGCGACGACAACAGGATAAGTTGAAGTTG
CAGGATGAGGAGTATGGGGAGCTGAAGAAGAAGAGACGGGAGGAACGGGC
GGCGATTCGGAAGAAGGAGCAGAGGTTCTACGAGGAGGAATCGATGACCG
AAGGTACTACAAGCCGTGGCAGCTAAGGGCGGAGGATGAGGATATAATAC
AGGACCAGATTAAAGAAGCGGAAGCTACTGTCGCGAGAGAAGTGGCGGAG
TTTGAAGCACGCTATTCGTCCCCCGAGGAGGAAAATGCCAAGCAGCAGGA
GGAGAAGAAACAGGAGTCAGGGCATGAAGAGACTCAGGAACCAGCCTCGG
TGTCCGAAACAGACGCCCTGGAGAACAAGAGTGTCGCTCAAGCGTCTTCG
GTCACGCTGGGAGCCGAGACGACAGCCGATGGAGGTTCAGAAGAAGCGAA
AGCCGAGACCACGCTTGCTAATGACAGCAACGTATCTACTAGTATGGACC
ATGACCGCTCGGATATCCATCGACACGACGATGATGGCGGTGAAGTGGAA
GAGGATCAGGAAGATACGGTAATCTACTAGATGCGCACGCGCCACTCGAA
TATGATTGCGATGGCTCATTTCCTTAAGACGAGGACGGAGCCTGTATTAA
ACTCTCGCGTCGGCCGTCGCCCTCCCCGATCAAGACACTATAATCCCGTC
CCCAGAAGCAGGGCTAAAGCGGCGACAATCGTCAATTACGGACCCCGACT
CGGAGAACAAACGCCGTTGTCTTAGCTCACAGGCAGAACATCACGACGAC
ACCCAGTCCATTCCAGATCGCAAACAGTCCTCGCCAGATGTAACAGAGCG
GAAACCGCGACGTGGCGCAGGACGGGATGAGGAGCGCAAACGCGGCCAAC
GACTATTCGGTGCTTTGCTGGGGACGCTTTCGCAGAGCTCGAGCTCGGCG
GCCCAAAAGCGACGTGCGGATATTGAGCGACGACAACAGGATAAGTTGAA
GTTGCAGGATGAGGAGTATGGGGAGCTGAAGAAGAAGAGACGGGAGGAAC
GGGCGGCGATTCGGAAGAAGGAGCAGAGGTTCTACGAGGAGGAATCGATG
ACCGAAGGTACTACAAGCCGTGGCAGCTAAGGGCGGAGGATGAGGATATA
ATACAGGACCAGATTAAAGAAGCGGAAGCTACTGTCGCGAGAGAAGTGGC
GGAGTTTGAAGCACGCTATTCGTCCCCCGAGGAGGAAAATGCCAAGCAGC
AGGAGGAGAAGAAACAGGAGTCAGGGCATGAAGAGACTCAGGAACCAGCC
TCGGTGTCCGAAACAGACGCCCTGGAGAACAAGAGTGTCGCTCAAGCGTC
TTCGGTCACGCTGGGAGCCGAGACGACAGCCGATGGAGGTTCAGAAGAAG
CGAAAGCCGAGACCACGCTTGCTAATGACAGCAACGTATCTACTAGTATG
GACCATGACCGCTCGGATATCCATCGACACGACGATGATGGCGGTGAAGT
GGAAGAGGATCAGGAAGATACGGTAATCTACTAGATGCGCACGCGCCACT
CGAATATGATTGCGATGGCTCATTTCCTTAAGACGAGGACGGAGCCTGTA
TTAAACTCTCGCGTCGGCCGTCGCCCTCCCCGATCAAGACACTATAATCC
CGTCCCCAGAAGCAGGGCTAAAGCGGCGACAATCGTCAATTACGGACCCC
GACTCGGAGAACAAACGCCGTTGTCTTAGCTCACAGGCAGAACATCACGA
CGACACCCAGTCCATTCCAGATCGCAAACAGTCCTCGCCAGATGTAACAG
AGCGGAAACCGCGACGTGGCGCAGGACGGGATGAGGAGCGCAAACGCGGC
CAACGACTATTCGGTGCTTTGCTGGGGACGCTTTCGCAGAGCTCGAGCTC
GGCGGCCCAAAAGCGACGTGCGGATATTGAGCGACGACAACAGGATAAGT
TGAAGTTGCAGGATGAGGAGTATGGGGAGCTGAAGAAGAAGAGACGGGAG
GAACGGGCGGCGATTCGGAAGAAGGAGCAGAGGTTCTACGAGGAGGAATC
GATGACCGAAGGTACTACAAGCCGTGGCAGCTAAGGGCGGAGGATGAGGA
TATAATACAGGACCAGATTAAAGAAGCGGAAGCTACTGTCGCGAGAGAAG
TGGCGGAGTTTGAAGCACGCTATTCGTCCCCCGAGGAGGAAAATGCCAAG
CAGCAGGAGGAGAAGAAACAGGAGTCAGGGCATGAAGAGACTCAGGAACC
AGCCTCGGTGTCCGAAACAGACGCCCTGGAGAACAAGAGTGTCGCTCAAG
CGTCTTCGGTCACGCTGGGAGCCGAGACGACAGCCGATGGAGGTTCAGAA
GAAGCGAAAGCCGAGACCACGCTTGCTAATGACAGCAACGTATCTACTAG
TATGGACCATGACCGCTCGGATATCCATCGACACGACGATGATGGCGGTG
AAGTGGAAGAGGATCAGGAAGATACGGTAATCTACTAGATGCGCACGCGC
CACTCGAATATGATTGCGATGGCTCATTTCCTTAAGACGAGGACGGAGCC
TGTATTAAACTCTCGCGTCGGCCGTCGCCCTCCCCGATCAAGACACTATA
ATCCCGTCCCCAGAAGCAGGGCTAAAGCGGCGACAATCGTCAATTACGGA
CCCCGACTCGGAGAACAAACGCCGTTGTCTTAGCTCACAGGCAGAACATC
ACGACGACACCCAGTCCATTCCAGATCGCAAACAGTCCTCGCCAGATGTA
ACAGAGCGGAAACCGCGACGTGGCGCAGGACGGGATGAGGAGCGCAAACG
CGGCCAACGACTATTCGGTGCTTTGCTGGGGACGCTTTCGCAGAGCTCGA
GCTCGGCGGCCCAAAAGCGACGTGCGGATATTGAGCGACGACAACAGGAT
AAGTTGAAGTTGCAGGATGAGGAGTATGGGGAGCTGAAGAAGAAGAGACG
GGAGGAACGGGCGGCGATTCGGAAGAAGGAGCAGAGGTTCTACGAGGAGG
AATCGATGACCGAAGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008121ATCC10864_008121Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008121-T1ATCC10864_008121-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008121-T1.cdsATCC10864_008121-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008121-T1.exon4ATCC10864_008121-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008121-T1.exon3ATCC10864_008121-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008121-T1.exon2ATCC10864_008121-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008121-T1.exon1ATCC10864_008121-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04696
InterProIPR006786
InterProIPR039853
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:194563..195768 -
Powered by Drupal