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ATCC10864_008134-T1, ATCC10864_008134-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008134-T1
Unique NameATCC10864_008134-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:233890..234624+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008134-T1 ID=ATCC10864_008134-T1|Name=ATCC10864_008134-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=735bp|location=Sequence derived from alignment at MCQH01000196:233890..234624+ (Aspergillus niger ATCC 10864)
ATGCGTCAACTCACCGAAGGTAGGTACAACCATCTCCGTCTGTTGTGATT
CTCGCGCATGGATTCTTATTTCGCTTCTGTTTAGAGGAAACCCGGACTTT
GTTCGAAAAGTTGGCCAACTACACTGGAAGGAGTCTTAACAACCTGATCG
CACCTCCTTCTGGCTCCGAAGATGCCAACGACCGCTATGTTTTCCGTCTT
CACGGCAGCAGAGTATACTACCTGAGACTTTCTCTGGCGAACCTCGCAAC
CAGCATTCCTCGCGCCAACCTCCTCACCCTCGGAACCTGCATCGGAAAGT
TCACCAAGACCGGAAAGTTCAGAATCCAGCTTACGGCTTTGGATGTCCTC
GCTCCTCATGCGCGCTACAAGGTGTGGATCAAGCAGAACGGTGTGATGCC
GTTCCTCTATGGCTCCAACGTGGCCAAGGCCCACGTCGGAAGATTCAGCG
AGGACTGCCCGGAGAATGCCGGTGTAATCGTTATGGATATGAATGATACG
CCATTGGTAAGAAGACCTCGGCTGGATTGAGATAATCAGAGGCTGATATA
CGTTAGGGATTCGGTGTGACTGCCCGGTCGAGTGCTGAAACCCGGAGACT
GGAGCCCACAGCCAACGTGGTGTTCCGTCAGGCAGATATTGGAGAGTACC
TGAGAGAGGTAGGTTGACCAAATGTCACATCCACGGTATCAATTTGCTGA
CATACCCCTAGGAAGATACTCTGTTTACGACCTAA
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Coding sequence (CDS) from alignment at MCQH01000196:233890..234624+

>ATCC10864_008134-T1 ID=ATCC10864_008134-T1|Name=ATCC10864_008134-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2268bp|location=Sequence derived from alignment at MCQH01000196:233890..234624+ (Aspergillus niger ATCC 10864)
ATGCGTCAACTCACCGAAGAGGAAACCCGGACTTTGTTCGAAAAGTTGGC
CAACTACACTGGAAGGAGTCTTAACAACCTGATCGCACCTCCTTCTGGCT
CCGAAGATGCCAACGACCGCTATGTTTTCCGTCTTCACGGCAGCAGAGTA
TACTACCTGAGACTTTCTCTGGCGAACCTCGCAACCAGCATTCCTCGCGC
CAACCTCCTCACCCTCGGAACCTGCATCGGAAAGTTCACCAAGACCGGAA
AGTTCAGAATCCAGCTTACGGCTTTGGATGTCCTCGCTCCTCATGCGCGC
TACAAGGTGTGGATCAAGCAGAACGGTGTGATGCCGTTCCTCTATGGCTC
CAACGTGGCCAAGGCCCACGTCGGAAGATTCAGCGAGGACTGCCCGGAGA
ATGCCGGTGTAATCGTTATGGATATGAATGATACGCCATTGGGATTCGGT
GTGACTGCCCGGTCGAGTGCTGAAACCCGGAGACTGGAGCCCACAGCCAA
CGTGGTGTTCCGTCAGGCAGATATTGGAGAGTACCTGAGAGAGGAAGATA
CTCTGTTTACGACCTAAATGCGTCAACTCACCGAAGAGGAAACCCGGACT
TTGTTCGAAAAGTTGGCCAACTACACTGGAAGGAGTCTTAACAACCTGAT
CGCACCTCCTTCTGGCTCCGAAGATGCCAACGACCGCTATGTTTTCCGTC
TTCACGGCAGCAGAGTATACTACCTGAGACTTTCTCTGGCGAACCTCGCA
ACCAGCATTCCTCGCGCCAACCTCCTCACCCTCGGAACCTGCATCGGAAA
GTTCACCAAGACCGGAAAGTTCAGAATCCAGCTTACGGCTTTGGATGTCC
TCGCTCCTCATGCGCGCTACAAGGTGTGGATCAAGCAGAACGGTGTGATG
CCGTTCCTCTATGGCTCCAACGTGGCCAAGGCCCACGTCGGAAGATTCAG
CGAGGACTGCCCGGAGAATGCCGGTGTAATCGTTATGGATATGAATGATA
CGCCATTGGGATTCGGTGTGACTGCCCGGTCGAGTGCTGAAACCCGGAGA
CTGGAGCCCACAGCCAACGTGGTGTTCCGTCAGGCAGATATTGGAGAGTA
CCTGAGAGAGGAAGATACTCTGTTTACGACCTAAATGCGTCAACTCACCG
AAGAGGAAACCCGGACTTTGTTCGAAAAGTTGGCCAACTACACTGGAAGG
AGTCTTAACAACCTGATCGCACCTCCTTCTGGCTCCGAAGATGCCAACGA
CCGCTATGTTTTCCGTCTTCACGGCAGCAGAGTATACTACCTGAGACTTT
CTCTGGCGAACCTCGCAACCAGCATTCCTCGCGCCAACCTCCTCACCCTC
GGAACCTGCATCGGAAAGTTCACCAAGACCGGAAAGTTCAGAATCCAGCT
TACGGCTTTGGATGTCCTCGCTCCTCATGCGCGCTACAAGGTGTGGATCA
AGCAGAACGGTGTGATGCCGTTCCTCTATGGCTCCAACGTGGCCAAGGCC
CACGTCGGAAGATTCAGCGAGGACTGCCCGGAGAATGCCGGTGTAATCGT
TATGGATATGAATGATACGCCATTGGGATTCGGTGTGACTGCCCGGTCGA
GTGCTGAAACCCGGAGACTGGAGCCCACAGCCAACGTGGTGTTCCGTCAG
GCAGATATTGGAGAGTACCTGAGAGAGGAAGATACTCTGTTTACGACCTA
AATGCGTCAACTCACCGAAGAGGAAACCCGGACTTTGTTCGAAAAGTTGG
CCAACTACACTGGAAGGAGTCTTAACAACCTGATCGCACCTCCTTCTGGC
TCCGAAGATGCCAACGACCGCTATGTTTTCCGTCTTCACGGCAGCAGAGT
ATACTACCTGAGACTTTCTCTGGCGAACCTCGCAACCAGCATTCCTCGCG
CCAACCTCCTCACCCTCGGAACCTGCATCGGAAAGTTCACCAAGACCGGA
AAGTTCAGAATCCAGCTTACGGCTTTGGATGTCCTCGCTCCTCATGCGCG
CTACAAGGTGTGGATCAAGCAGAACGGTGTGATGCCGTTCCTCTATGGCT
CCAACGTGGCCAAGGCCCACGTCGGAAGATTCAGCGAGGACTGCCCGGAG
AATGCCGGTGTAATCGTTATGGATATGAATGATACGCCATTGGGATTCGG
TGTGACTGCCCGGTCGAGTGCTGAAACCCGGAGACTGGAGCCCACAGCCA
ACGTGGTGTTCCGTCAGGCAGATATTGGAGAGTACCTGAGAGAGGAAGAT
ACTCTGTTTACGACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0042255ribosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP7ATCC10864_008134Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008134-T1.exon1ATCC10864_008134-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008134-T1.exon2ATCC10864_008134-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008134-T1.exon3ATCC10864_008134-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008134-T1.exon4ATCC10864_008134-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008134-T1.cdsATCC10864_008134-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008134-T1ATCC10864_008134-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005155
PFAMPF17833
InterProIPR016686
PFAMPF03657
InterProIPR015947
InterProIPR036974
InterProIPR002478
InterProIPR040598
Properties
Property NameValue
NoteBUSCO:EOG09264PD5
Productribosome biosynthesis protein nip7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:233890..234624 +
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