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ATCC10864_008168-T1, ATCC10864_008168-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008168-T1
Unique NameATCC10864_008168-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:352524..354167+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008168-T1 ID=ATCC10864_008168-T1|Name=ATCC10864_008168-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1644bp|location=Sequence derived from alignment at MCQH01000196:352524..354167+ (Aspergillus niger ATCC 10864)
ATGACCGAGGAATCCCACGTCGGCGACCTGTTCGCCACCGCCGACCAGAA
GCAGGAGATTTCTGATTTACACCGTGAAACTCTTCCTCTGGTCGTCACTG
AGGAGGAAGCTTTGGCTCGCGCCAGGAACCAGCCCGATGAAGCCCTCCCC
TTGCGCATCACTTTTGGCCCGCAAGATCGGGACAACCCCCGCTGCTGGGG
TCGCTGGCGCAAGTGGTACATCACCCTGTTTGCCAGTTTTCTGAACGTCA
TCACGTAGGTCTACTGCCAATCGCCTGTTTGTTGGCCCTACTAATCCTTA
TAATCCAGAACTTGGTCTTGTGGTTCCTTCTCCTCCGGAGCCACCGGCAT
CGCGGAGCATTTCCACGTGTCTACCGAAGTCACCACGCTATGCTTGTCCA
TGTATGTGCTGGGATATGCCATTGGACCTGTCTTGCTGGCTCCTCTATCC
GAGTACTTCGGTCGCCAGCCCGTTTATATTGTCTCGTGGTTCATCATGTC
CCTTTTCCAGATGCCTCTGGCACTGGCACCCAACATTGGCACCATTATTG
TCTGCCGTTTCATTGCCGGTTTCGCAGGTGGTGCCCCGTTGACCAACACG
GGTGGTACCATCAGTGATCTGTGGGAGCGTAACCATAGTGGTGGCCCCAT
GGCCTTCTACGGTCTTAGTAGCACGTTTGGCCCGCCCATGGCCCTGGTGG
TCAGCGGCTACATTGGCCTGAACCTGAACTGGCACTGGATCTTCTGGATC
ATGATGGCCATCACCGGTGGCACCTGGATTGCGCTGGTCCTCACTATCCC
GGAAACCCGTCACAGTATCATCCTGCAGCGTAAGGCATCCCGCGTGCGCA
AGCAGATGCAACGCGAGGGGCTGCGCTCCGCTGGGACCACCACCGACCTC
CACGCAGAAGACCGCAAGGGCCTGCACCAGTTGTTCGCTATCACCCTCAC
TCGTCCCTTCCGCTTCCTGTTCACCGAGCCCATCACCACCTTCTCCGCCA
TCTACAATGGCTTCCTTTACGGCCTGGTCTACCTCTTCAACGAAGCCTTC
CCCCTCGTTTTTGGCGAACCCAACGGCCACGGCTTCAACGTCGGCCAGCA
GGGTCTCTGCTTCCTGGGTATGGCCATTGGACCCATCATCGCCTGCGCCC
TGTCCCCGCTGCAGGAGCGGTACTACCTGCGTCGCGTAGCCGAGAACAGC
GGCCGCAGTGTGCCCGAGGCACGTATGTGGATGGCCCGTGTCGGCTCCTT
GCTCATCCCGATTAGTCTGTTCTGGTTCGGCTGGACCAGCTACCGGTCCG
TGCACTGGATTGTCCCCATCATTGCGTCTTCGTTCTTCGGTGCGGGTCTC
TACATCGTCATCCTCAGTATCCTCAACTACGTCGTCGACAGTTACCAGAC
CTACTCTGCCTCCGCGTTGGCCGGTGTCATCCTCGTCCGGAACCTCGTCG
GTGCTGGATTCCCCCTGTTCGCCACGCAGATGTACGAGAAGCTCGACTAT
GAGTGGGCATCCAGTCTGCTGGGCTTCATTGCCATTCTGCTCGTACCGAT
TCCCTTCATCTTCTTCTACAAGGGTCGTGCCATTCGGCTGCGCAGTCCTT
GGGCGCGCGAGCACTTTGACTCGGATGAGGATAGTCCCCATTAG
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Coding sequence (CDS) from alignment at MCQH01000196:352524..354167+

>ATCC10864_008168-T1 ID=ATCC10864_008168-T1|Name=ATCC10864_008168-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3180bp|location=Sequence derived from alignment at MCQH01000196:352524..354167+ (Aspergillus niger ATCC 10864)
ATGACCGAGGAATCCCACGTCGGCGACCTGTTCGCCACCGCCGACCAGAA
GCAGGAGATTTCTGATTTACACCGTGAAACTCTTCCTCTGGTCGTCACTG
AGGAGGAAGCTTTGGCTCGCGCCAGGAACCAGCCCGATGAAGCCCTCCCC
TTGCGCATCACTTTTGGCCCGCAAGATCGGGACAACCCCCGCTGCTGGGG
TCGCTGGCGCAAGTGGTACATCACCCTGTTTGCCAGTTTTCTGAACGTCA
TCACAACTTGGTCTTGTGGTTCCTTCTCCTCCGGAGCCACCGGCATCGCG
GAGCATTTCCACGTGTCTACCGAAGTCACCACGCTATGCTTGTCCATGTA
TGTGCTGGGATATGCCATTGGACCTGTCTTGCTGGCTCCTCTATCCGAGT
ACTTCGGTCGCCAGCCCGTTTATATTGTCTCGTGGTTCATCATGTCCCTT
TTCCAGATGCCTCTGGCACTGGCACCCAACATTGGCACCATTATTGTCTG
CCGTTTCATTGCCGGTTTCGCAGGTGGTGCCCCGTTGACCAACACGGGTG
GTACCATCAGTGATCTGTGGGAGCGTAACCATAGTGGTGGCCCCATGGCC
TTCTACGGTCTTAGTAGCACGTTTGGCCCGCCCATGGCCCTGGTGGTCAG
CGGCTACATTGGCCTGAACCTGAACTGGCACTGGATCTTCTGGATCATGA
TGGCCATCACCGGTGGCACCTGGATTGCGCTGGTCCTCACTATCCCGGAA
ACCCGTCACAGTATCATCCTGCAGCGTAAGGCATCCCGCGTGCGCAAGCA
GATGCAACGCGAGGGGCTGCGCTCCGCTGGGACCACCACCGACCTCCACG
CAGAAGACCGCAAGGGCCTGCACCAGTTGTTCGCTATCACCCTCACTCGT
CCCTTCCGCTTCCTGTTCACCGAGCCCATCACCACCTTCTCCGCCATCTA
CAATGGCTTCCTTTACGGCCTGGTCTACCTCTTCAACGAAGCCTTCCCCC
TCGTTTTTGGCGAACCCAACGGCCACGGCTTCAACGTCGGCCAGCAGGGT
CTCTGCTTCCTGGGTATGGCCATTGGACCCATCATCGCCTGCGCCCTGTC
CCCGCTGCAGGAGCGGTACTACCTGCGTCGCGTAGCCGAGAACAGCGGCC
GCAGTGTGCCCGAGGCACGTATGTGGATGGCCCGTGTCGGCTCCTTGCTC
ATCCCGATTAGTCTGTTCTGGTTCGGCTGGACCAGCTACCGGTCCGTGCA
CTGGATTGTCCCCATCATTGCGTCTTCGTTCTTCGGTGCGGGTCTCTACA
TCGTCATCCTCAGTATCCTCAACTACGTCGTCGACAGTTACCAGACCTAC
TCTGCCTCCGCGTTGGCCGGTGTCATCCTCGTCCGGAACCTCGTCGGTGC
TGGATTCCCCCTGTTCGCCACGCAGATGTACGAGAAGCTCGACTATGAGT
GGGCATCCAGTCTGCTGGGCTTCATTGCCATTCTGCTCGTACCGATTCCC
TTCATCTTCTTCTACAAGGGTCGTGCCATTCGGCTGCGCAGTCCTTGGGC
GCGCGAGCACTTTGACTCGGATGAGGATAGTCCCCATTAGATGACCGAGG
AATCCCACGTCGGCGACCTGTTCGCCACCGCCGACCAGAAGCAGGAGATT
TCTGATTTACACCGTGAAACTCTTCCTCTGGTCGTCACTGAGGAGGAAGC
TTTGGCTCGCGCCAGGAACCAGCCCGATGAAGCCCTCCCCTTGCGCATCA
CTTTTGGCCCGCAAGATCGGGACAACCCCCGCTGCTGGGGTCGCTGGCGC
AAGTGGTACATCACCCTGTTTGCCAGTTTTCTGAACGTCATCACAACTTG
GTCTTGTGGTTCCTTCTCCTCCGGAGCCACCGGCATCGCGGAGCATTTCC
ACGTGTCTACCGAAGTCACCACGCTATGCTTGTCCATGTATGTGCTGGGA
TATGCCATTGGACCTGTCTTGCTGGCTCCTCTATCCGAGTACTTCGGTCG
CCAGCCCGTTTATATTGTCTCGTGGTTCATCATGTCCCTTTTCCAGATGC
CTCTGGCACTGGCACCCAACATTGGCACCATTATTGTCTGCCGTTTCATT
GCCGGTTTCGCAGGTGGTGCCCCGTTGACCAACACGGGTGGTACCATCAG
TGATCTGTGGGAGCGTAACCATAGTGGTGGCCCCATGGCCTTCTACGGTC
TTAGTAGCACGTTTGGCCCGCCCATGGCCCTGGTGGTCAGCGGCTACATT
GGCCTGAACCTGAACTGGCACTGGATCTTCTGGATCATGATGGCCATCAC
CGGTGGCACCTGGATTGCGCTGGTCCTCACTATCCCGGAAACCCGTCACA
GTATCATCCTGCAGCGTAAGGCATCCCGCGTGCGCAAGCAGATGCAACGC
GAGGGGCTGCGCTCCGCTGGGACCACCACCGACCTCCACGCAGAAGACCG
CAAGGGCCTGCACCAGTTGTTCGCTATCACCCTCACTCGTCCCTTCCGCT
TCCTGTTCACCGAGCCCATCACCACCTTCTCCGCCATCTACAATGGCTTC
CTTTACGGCCTGGTCTACCTCTTCAACGAAGCCTTCCCCCTCGTTTTTGG
CGAACCCAACGGCCACGGCTTCAACGTCGGCCAGCAGGGTCTCTGCTTCC
TGGGTATGGCCATTGGACCCATCATCGCCTGCGCCCTGTCCCCGCTGCAG
GAGCGGTACTACCTGCGTCGCGTAGCCGAGAACAGCGGCCGCAGTGTGCC
CGAGGCACGTATGTGGATGGCCCGTGTCGGCTCCTTGCTCATCCCGATTA
GTCTGTTCTGGTTCGGCTGGACCAGCTACCGGTCCGTGCACTGGATTGTC
CCCATCATTGCGTCTTCGTTCTTCGGTGCGGGTCTCTACATCGTCATCCT
CAGTATCCTCAACTACGTCGTCGACAGTTACCAGACCTACTCTGCCTCCG
CGTTGGCCGGTGTCATCCTCGTCCGGAACCTCGTCGGTGCTGGATTCCCC
CTGTTCGCCACGCAGATGTACGAGAAGCTCGACTATGAGTGGGCATCCAG
TCTGCTGGGCTTCATTGCCATTCTGCTCGTACCGATTCCCTTCATCTTCT
TCTACAAGGGTCGTGCCATTCGGCTGCGCAGTCCTTGGGCGCGCGAGCAC
TTTGACTCGGATGAGGATAGTCCCCATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008168ATCC10864_008168Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008168-T1.exon1ATCC10864_008168-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008168-T1.exon2ATCC10864_008168-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008168-T1.cdsATCC10864_008168-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008168-T1ATCC10864_008168-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1169:sugar transport protein
NoteantiSMASH:Cluster_1000196.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:352524..354167 +
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