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ATCC10864_008180-T1, ATCC10864_008180-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008180-T1
Unique NameATCC10864_008180-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:379419..380508-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008180-T1 ID=ATCC10864_008180-T1|Name=ATCC10864_008180-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1090bp|location=Sequence derived from alignment at MCQH01000196:379419..380508- (Aspergillus niger ATCC 10864)
ATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCA
ACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGA
CAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTAGCGTAAGTA
TGCCGATCTTCCCGATTCATTGAGATTGTTGGGCTAATGGCTTTGCTAGC
CTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGG
TTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACT
GCATGATCGAGGGTCAGTATTTGTCCAAGCAGCACCATTAGCAAATTGAC
TAACTATTCCAGGCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGG
TTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTC
ATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCA
ACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGC
CGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTC
GGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGC
CGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACATCTGAT
CGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCT
GGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAA
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Coding sequence (CDS) from alignment at MCQH01000196:379419..380508-

>ATCC10864_008180-T1 ID=ATCC10864_008180-T1|Name=ATCC10864_008180-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2952bp|location=Sequence derived from alignment at MCQH01000196:379419..380508- (Aspergillus niger ATCC 10864)
GCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGGTTCGGCGAATGT
GACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTCATCGCGCGAAAC
CTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCAACATCAAGGCTG
CTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGCCGGCCGTGGCGC
GTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTCGGACATCATCAA
CCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGCCGCTGTATTATG
AATACAACAACTCTGGTGCGGGATCGGACACATCTGATCGCGAATACGAG
ACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCTGGGCGAGACTTG
GGGAGACTGGATTGATCGGAGCTACTAACCTTGTCGGAAACGCAGATCAA
CTGGGCTTCTATGGATGCCAATTCAGTGGTTATCAAGACACTCTCTATGT
CAAGGCCGGTACCCAGTATTACTCCAACTGCATGATCGAGGATGCATACT
CCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGC
TCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAG
GGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATCGGCGACGCG
CTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTACGTTGCCAG
CGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCAACCTCACCT
TGTACGGTGAGACTACCGACACCAGCACATACAAGGACAATGTGGTGACC
ATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGACAAGAGCGC
CACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACATCAACGTGG
AGAATGGATATGGTGAGGGAGCACAGGCTGTAGCGCGCGGTCGACTACAT
CTTCGGCGATGCGTCCGTGTGGTTCGGCGAATGTGACATTGTGTCTAACG
GCGCCGGTGCCATCACGGCCTCATCGCGCGAAACCTCCTCTGACTCAGGC
TGGTACGCTATCGACAACTGCAACATCAAGGCTGCTTCGGGAGTCTCTCT
CACGGAGGAAGTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGCGAGTCA
TCTACCAGAACTCAGTGTTGTCGGACATCATCAACCCCAAGGGATGGACG
ACCATGGCAGACGGTGCGACGCCGCTGTATTATGAATACAACAACTCTGG
TGCGGGATCGGACACATCTGATCGCGAATACGAGACCTCCATTTCTGCTG
CGGTTGACAAGACCACAGTGCTGGGCGAGACTTGGGGAGACTGGATTGAT
CGGAGCTACTAACCTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGAT
GCCAATTCAGTGGTTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAG
TATTACTCCAACTGCATGATCGAGGATGCATACTCCATATCTTCTGGGCG
CCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCAGAGCACATC
AAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGG
ATCGGATGGAACATATTCCACCATCGGCGACGCGCTTGACGCTCTAGGCT
CATCCACTTCGTCCGCTTGCATTTACGTTGCCAGCGGCACGTATGAGGAG
CAGCTGACCATTGACTACGCTGGCAACCTCACCTTGTACGGTGAGACTAC
CGACACCAGCACATACAAGGACAATGTGGTGACCATTACCCACACCATCT
CGTCGTCGGATGCCGGCTCTCTCGACAAGAGCGCCACCGTCAACGTGGTC
TCGGATGGGTTCAGCATGTACAACATCAACGTGGAGAATGGATATGGTGA
GGGAGCACAGGCTGTAGCGCGCGGTCGACTACATCTTCGGCGATGCGTCC
GTGTGGTTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCAC
GGCCTCATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACA
ACTGCAACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTAC
CTGGGCCGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGT
GTTGTCGGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTG
CGACGCCGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACA
TCTGATCGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCAC
AGTGCTGGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAACCTT
GTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGGTTA
TCAAGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACTGCA
TGATCGAGGATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGC
TGCTACCGCCGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCC
GGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATAT
TCCACCATCGGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGC
TTGCATTTACGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACT
ACGCTGGCAACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATAC
AAGGACAATGTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGG
CTCTCTCGACAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCA
TGTACAACATCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTA
GC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008180ATCC10864_008180Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008180-T1ATCC10864_008180-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008180-T1.cdsATCC10864_008180-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008180-T1.exon3ATCC10864_008180-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008180-T1.exon2ATCC10864_008180-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008180-T1.exon1ATCC10864_008180-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR033131
InterProIPR000070
PFAMPF01095
InterProIPR012334
InterProIPR011050
Properties
Property NameValue
NoteCAZy:CE8
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:379419..380508 -
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