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ATCC10864_008181-T1, ATCC10864_008181-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008181-T1
Unique NameATCC10864_008181-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:381459..382742+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008181-T1 ID=ATCC10864_008181-T1|Name=ATCC10864_008181-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1284bp|location=Sequence derived from alignment at MCQH01000196:381459..382742+ (Aspergillus niger ATCC 10864)
ATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGACTGAGCTA
TGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCTCCATGCTC
GTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCGACGATGTG
CCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGCACCATTGT
ATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGACTTGGGCA
ACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGTTCGCCAGC
GACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTATCCGATGT
GGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCATCGATGGCA
ATGGCCAGGATGCGTACGTGATCACCATTCTCGGAAGCAAGCCTCCCAGT
CCATTTAGCTGACCGATGCAATTTAGGTGGGATCTCTTTGCGAGTGACAG
CAGTTACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCG
AAATCTCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTC
AAGGGTGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAA
CTCCAAGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGACATCGGCG
AGAGTACCTATGTAACCATCACTGAGGTCACCGTCGTCAACGATGATGAC
TGTGTGGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGACACCATCAG
CTGCACCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCG
ACGACTCGGTCAAGAATATCTATGTCACGGGCGCAACCATGATCAACTCC
ACCAAAGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGATCACGGCAC
TTCCACGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGACAACTCCG
ACTATGCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATGACTACTGC
GAGGAGAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTT
CAGCGGCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAACATCGACT
GCGGTTCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAG
GCGCCGTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTT
GGGCGTCACCTGCACTTCAGGAGCATCGGGCTAA
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Coding sequence (CDS) from alignment at MCQH01000196:381459..382742+

>ATCC10864_008181-T1 ID=ATCC10864_008181-T1|Name=ATCC10864_008181-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2442bp|location=Sequence derived from alignment at MCQH01000196:381459..382742+ (Aspergillus niger ATCC 10864)
ATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGACTGAGCTA
TGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCTCCATGCTC
GTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCGACGATGTG
CCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGCACCATTGT
ATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGACTTGGGCA
ACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGTTCGCCAGC
GACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTATCCGATGT
GGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCATCGATGGCA
ATGGCCAGGATGCGTGGGATCTCTTTGCGAGTGACAGCAGTTACTCACGC
CCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCGAAATCTCCGGGCT
GCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTCAAGGGTGGCGCCA
CTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAACTCCAAGTCAGAC
AACCCGCCCAAGAACACTGATGGCTTCGACATCGGCGAGAGTACCTATGT
AACCATCACTGAGGTCACCGTCGTCAACGATGATGACTGTGTGGCCCTGA
AGCCCAGCTCCAACTACGTGACCGTCGACACCATCAGCTGCACCGGCTCC
CATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCGACGACTCGGTCAA
GAATATCTATGTCACGGGCGCAACCATGATCAACTCCACCAAAGCCGCCG
GAATCAAGACTTATCCGAGTGGAGGCGATCACGGCACTTCCACGGTCAGC
AATGTGACGTTCACCGATTTCACCGTAGACAACTCCGACTATGCCTTCCA
GATCCAGAGTTGTTATGGCGAGGACGATGACTACTGCGAGGAGAACCCGG
GCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTTCAGCGGCACAACC
AGTGACAAGTACGACCCGGTTGTGGCCAACATCGACTGCGGTTCGGATGG
AACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAGGCGCCGTCGGGCA
AGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTTGGGCGTCACCTGC
ACTTCAGGAGCATCGGGCTAAATGACGCTATATCGCAATCTTCTGCTTTT
GGCCAGCCTTGGACTGAGCTATGCTGCTCCCTCTAAGGTCCAACGTGCCC
CTGATTCGTCCCTCCATGCTCGTGCCGTCTGTACCCCAACCGCAGGAGGC
GATTCTTCCACCGACGATGTGCCCGCCATCACCGAGGCTCTCAGCTCGTG
CGGGAACGGGGGCACCATTGTATTCCCGGAGGGCAGCACCTACTACCTCA
ACAGTGTGCTTGACTTGGGCAACTGCAGTAATTGCGACATCCAGGTGGAA
GGTCTTTTGAAGTTCGCCAGCGACACCGATTACTGGAGCGGTCGCACCGC
CATGATCAGTGTATCCGATGTGGATGGCCTGAAGCTGCGCTCATTGACTG
GGTCGGGTGTCATCGATGGCAATGGCCAGGATGCGTGGGATCTCTTTGCG
AGTGACAGCAGTTACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAG
CAACCTCGAAATCTCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCA
ACTCAGTCAAGGGTGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATG
GATGCAAACTCCAAGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGA
CATCGGCGAGAGTACCTATGTAACCATCACTGAGGTCACCGTCGTCAACG
ATGATGACTGTGTGGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGAC
ACCATCAGCTGCACCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAA
GTCCAGCGACGACTCGGTCAAGAATATCTATGTCACGGGCGCAACCATGA
TCAACTCCACCAAAGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGAT
CACGGCACTTCCACGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGA
CAACTCCGACTATGCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATG
ACTACTGCGAGGAGAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTC
TCGAGCTTCAGCGGCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAA
CATCGACTGCGGTTCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCG
ATGTGAAGGCGCCGTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCG
TCTGACTTGGGCGTCACCTGCACTTCAGGAGCATCGGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008181ATCC10864_008181Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008181-T1.exon1ATCC10864_008181-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008181-T1.exon2ATCC10864_008181-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008181-T1.cdsATCC10864_008181-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008181-T1ATCC10864_008181-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:381459..382742 +
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