You are here

Home

ATCC10864_008198-T1, ATCC10864_008198-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008198-T1
Unique NameATCC10864_008198-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:432971..434249-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008198-T1 ID=ATCC10864_008198-T1|Name=ATCC10864_008198-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1279bp|location=Sequence derived from alignment at MCQH01000196:432971..434249- (Aspergillus niger ATCC 10864)
ATGGCCTCCCACCCAGCGATCACTGTAACCGCACTGAAGGGACCTTTGAC
GATCGAGCATGTCCCAACCCTCAAGGCTGAGCATCACGACGTTCAGGTCC
GAGTGGAATGGGCTCCGACTTCCCACCTGGATGTCTACCAAGTCGATGCT
GGTGTGATGGTCCAGTTCCCTCAGATCTTGGGGGATAGCGCCGCCGGAAC
TGTGGTAGCTGTCGGTCCTGATGTCAAGCGTCTCCGGGTTGGCGATCGTG
TGTTCGGAATGTTCTTCCATAACAAGACACAGAAAGGCCAGCAGGTATAT
GTCACGGCACCAGAGACTCTTCTTGGCAAGGTTTGTTTACATTCAATTTC
TACTTCCACCTGAGATATATTTTCCAGGTTATCTTAACGGGAGAATTAGG
TCCCACAAAACATTCCATTGTCTGCTGCCTCTACCATACCGACGAACTTC
TGCACTGCGTTCTTCCCGCTGTTCGAGAAGTTAAAAGTTGAACTACCCTG
GCCGCGTCCAGAGAACTTCACTCCATCCGACAAAGACCTACCGATTCTCA
TTTGGGGTGCTGCCAGTTCTGTAGGGCAGTACGCGGTGCAAATCCTCAAA
TACTGGGGTTACACCAACGTTGTTGCAACAGCTTCCCCGAAGCATCATGA
AATGATCAAGGCTTATGGTGCGGCGCACGTCTTCGACTATCGTGACCCGG
ATGTTACCGCCTCTATCCTCGATCTCTTGAATAGCCAAGGGTACCAAGGA
AGCATTCGCGTCTTTGACTGCGTAAATTCGAAATTCGGTTCCTTGATTCC
GATCTCCGAAATAGCCACACAGTCAGGCTCAGCTGTTGCTGCTGTTCTTC
CGATTGTGATCAGCAGACCATCCGAGAAAGACGGTCTACAGCTCTCCTTT
GATGTCTCTACAGAGGCGACCTGGGCATCGGGTGTTGAGACTCACCCCAT
TGTTGTCTACGACTACGACAAGGTATGTTGTATTTCCATGTTGCGTCGTG
AGTTTGTGGAAGCGTTCGTTACTCACACTGCAATGAATTCTGGGCTGACA
TCAACCCTTCTCCTAGAATGACTTTTTGCGGGACCGTCTCCAGACTGAGA
TACTGCCTACACTTGTGGCCCAAGGTGCTATCAAGCCGAATAAACAGCGG
ATAGTTGAAGGAGAGACTCTCTTAGACAGGGCGAGTAAAGCTTTAGACAT
CTTGAGAAGCGGCACTGTTAGTGGTGAACGGTTGGTGTGGCAGGTCTGGA
CCGAGGAGGAGTTCCCTGAGTATAAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000196:432971..434249-

>ATCC10864_008198-T1 ID=ATCC10864_008198-T1|Name=ATCC10864_008198-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3348bp|location=Sequence derived from alignment at MCQH01000196:432971..434249- (Aspergillus niger ATCC 10864)
AATGACTTTTTGCGGGACCGTCTCCAGACTGAGATACTGCCTACACTTGT
GGCCCAAGGTGCTATCAAGCCGAATAAACAGCGGATAGTTGAAGGAGAGA
CTCTCTTAGACAGGGCGAGTAAAGCTTTAGACATCTTGAGAAGCGGCACT
GTTAGTGGTGAACGGTTGGTGTGGCAGGTCTGGACCGAGGAGGAGTTCCC
TGAGTATAAGTGAGTCCCACAAAACATTCCATTGTCTGCTGCCTCTACCA
TACCGACGAACTTCTGCACTGCGTTCTTCCCGCTGTTCGAGAAGTTAAAA
GTTGAACTACCCTGGCCGCGTCCAGAGAACTTCACTCCATCCGACAAAGA
CCTACCGATTCTCATTTGGGGTGCTGCCAGTTCTGTAGGGCAGTACGCGG
TGCAAATCCTCAAATACTGGGGTTACACCAACGTTGTTGCAACAGCTTCC
CCGAAGCATCATGAAATGATCAAGGCTTATGGTGCGGCGCACGTCTTCGA
CTATCGTGACCCGGATGTTACCGCCTCTATCCTCGATCTCTTGAATAGCC
AAGGGTACCAAGGAAGCATTCGCGTCTTTGACTGCGTAAATTCGAAATTC
GGTTCCTTGATTCCGATCTCCGAAATAGCCACACAGTCAGGCTCAGCTGT
TGCTGCTGTTCTTCCGATTGTGATCAGCAGACCATCCGAGAAAGACGGTC
TACAGCTCTCCTTTGATGTCTCTACAGAGGCGACCTGGGCATCGGGTGTT
GAGACTCACCCCATTGTTGTCTACGACTACGACAAGATGGCCTCCCACCC
AGCGATCACTGTAACCGCACTGAAGGGACCTTTGACGATCGAGCATGTCC
CAACCCTCAAGGCTGAGCATCACGACGTTCAGGTCCGAGTGGAATGGGCT
CCGACTTCCCACCTGGATGTCTACCAAGTCGATGCTGGTGTGATGGTCCA
GTTCCCTCAGATCTTGGGGGATAGCGCCGCCGGAACTGTGGTAGCTGTCG
GTCCTGATGTCAAGCGTCTCCGGGTTGGCGATCGTGTGTTCGGAATGTTC
TTCCATAACAAGACACAGAAAGGCCAGCAGGTATATGTCACGGCACCAGA
GACTCTTCTTGGCAAGAATGACTTTTTGCGGGACCGTCTCCAGACTGAGA
TACTGCCTACACTTGTGGCCCAAGGTGCTATCAAGCCGAATAAACAGCGG
ATAGTTGAAGGAGAGACTCTCTTAGACAGGGCGAGTAAAGCTTTAGACAT
CTTGAGAAGCGGCACTGTTAGTGGTGAACGGTTGGTGTGGCAGGTCTGGA
CCGAGGAGGAGTTCCCTGAGTATAAGTGAGTCCCACAAAACATTCCATTG
TCTGCTGCCTCTACCATACCGACGAACTTCTGCACTGCGTTCTTCCCGCT
GTTCGAGAAGTTAAAAGTTGAACTACCCTGGCCGCGTCCAGAGAACTTCA
CTCCATCCGACAAAGACCTACCGATTCTCATTTGGGGTGCTGCCAGTTCT
GTAGGGCAGTACGCGGTGCAAATCCTCAAATACTGGGGTTACACCAACGT
TGTTGCAACAGCTTCCCCGAAGCATCATGAAATGATCAAGGCTTATGGTG
CGGCGCACGTCTTCGACTATCGTGACCCGGATGTTACCGCCTCTATCCTC
GATCTCTTGAATAGCCAAGGGTACCAAGGAAGCATTCGCGTCTTTGACTG
CGTAAATTCGAAATTCGGTTCCTTGATTCCGATCTCCGAAATAGCCACAC
AGTCAGGCTCAGCTGTTGCTGCTGTTCTTCCGATTGTGATCAGCAGACCA
TCCGAGAAAGACGGTCTACAGCTCTCCTTTGATGTCTCTACAGAGGCGAC
CTGGGCATCGGGTGTTGAGACTCACCCCATTGTTGTCTACGACTACGACA
AGATGGCCTCCCACCCAGCGATCACTGTAACCGCACTGAAGGGACCTTTG
ACGATCGAGCATGTCCCAACCCTCAAGGCTGAGCATCACGACGTTCAGGT
CCGAGTGGAATGGGCTCCGACTTCCCACCTGGATGTCTACCAAGTCGATG
CTGGTGTGATGGTCCAGTTCCCTCAGATCTTGGGGGATAGCGCCGCCGGA
ACTGTGGTAGCTGTCGGTCCTGATGTCAAGCGTCTCCGGGTTGGCGATCG
TGTGTTCGGAATGTTCTTCCATAACAAGACACAGAAAGGCCAGCAGGTAT
ATGTCACGGCACCAGAGACTCTTCTTGGCAAGAATGACTTTTTGCGGGAC
CGTCTCCAGACTGAGATACTGCCTACACTTGTGGCCCAAGGTGCTATCAA
GCCGAATAAACAGCGGATAGTTGAAGGAGAGACTCTCTTAGACAGGGCGA
GTAAAGCTTTAGACATCTTGAGAAGCGGCACTGTTAGTGGTGAACGGTTG
GTGTGGCAGGTCTGGACCGAGGAGGAGTTCCCTGAGTATAAGTGAGTCCC
ACAAAACATTCCATTGTCTGCTGCCTCTACCATACCGACGAACTTCTGCA
CTGCGTTCTTCCCGCTGTTCGAGAAGTTAAAAGTTGAACTACCCTGGCCG
CGTCCAGAGAACTTCACTCCATCCGACAAAGACCTACCGATTCTCATTTG
GGGTGCTGCCAGTTCTGTAGGGCAGTACGCGGTGCAAATCCTCAAATACT
GGGGTTACACCAACGTTGTTGCAACAGCTTCCCCGAAGCATCATGAAATG
ATCAAGGCTTATGGTGCGGCGCACGTCTTCGACTATCGTGACCCGGATGT
TACCGCCTCTATCCTCGATCTCTTGAATAGCCAAGGGTACCAAGGAAGCA
TTCGCGTCTTTGACTGCGTAAATTCGAAATTCGGTTCCTTGATTCCGATC
TCCGAAATAGCCACACAGTCAGGCTCAGCTGTTGCTGCTGTTCTTCCGAT
TGTGATCAGCAGACCATCCGAGAAAGACGGTCTACAGCTCTCCTTTGATG
TCTCTACAGAGGCGACCTGGGCATCGGGTGTTGAGACTCACCCCATTGTT
GTCTACGACTACGACAAGATGGCCTCCCACCCAGCGATCACTGTAACCGC
ACTGAAGGGACCTTTGACGATCGAGCATGTCCCAACCCTCAAGGCTGAGC
ATCACGACGTTCAGGTCCGAGTGGAATGGGCTCCGACTTCCCACCTGGAT
GTCTACCAAGTCGATGCTGGTGTGATGGTCCAGTTCCCTCAGATCTTGGG
GGATAGCGCCGCCGGAACTGTGGTAGCTGTCGGTCCTGATGTCAAGCGTC
TCCGGGTTGGCGATCGTGTGTTCGGAATGTTCTTCCATAACAAGACACAG
AAAGGCCAGCAGGTATATGTCACGGCACCAGAGACTCTTCTTGGCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008198ATCC10864_008198Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008198-T1ATCC10864_008198-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008198-T1.cdsATCC10864_008198-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008198-T1.exon3ATCC10864_008198-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008198-T1.exon2ATCC10864_008198-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008198-T1.exon1ATCC10864_008198-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00107
PFAMPF08240
InterProIPR013149
InterProIPR036291
InterProIPR013154
InterProIPR011032
InterProIPR020843
Properties
Property NameValue
NoteSMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase
NoteantiSMASH:Cluster_1000196.2
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:432971..434249 -
Powered by Drupal