You are here

Home

ATCC10864_008199-T1, ATCC10864_008199-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008199-T1
Unique NameATCC10864_008199-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:435390..436175+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008199-T1 ID=ATCC10864_008199-T1|Name=ATCC10864_008199-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=786bp|location=Sequence derived from alignment at MCQH01000196:435390..436175+ (Aspergillus niger ATCC 10864)
ATGGCTCGCATTCTCATTACTGGCTCTGTCGATGGACTTGGCCTTGAGGC
TGCCAGACAGCTTGTCCACAGAGGCCACACTGTGTACCTGCATGCACGCA
ATCAACAACGTGCAATGGACGCGAAATCGGCATGTCCAGGTGCCGCCGGG
GTGTTGACGGCCGACTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCA
CGATGTTAACGCAATTGGAAATTTTGATGCTGTCATCCTCAACGCTGGAC
TCATGCAGGGTGGCTTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTG
GTGTCTGTCAACCTTATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCC
ACCGAAGCGCCTCATTTTCATTTCCTCAAACCTGCACCGGCAGGCAAACA
TGGCGAGCATGGATGACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTAC
CAGGACTACCCAGCATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGC
CAATGCAGTCGCTCGGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACC
CCGGATGGGTGGCGACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTG
GAGGACGGTGTCGAAACGTATGTCATGTTGGCCGAAGGGGATTATGATGA
ACAGAACCTGTCTGGAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGC
CGATTCCGGCTGCAAGAGATGAGGATCTGCAAGAGAAGGTGGTGCAAGCC
TGCGAAGAGGTTACTGGATTGAGACTGTCGGCTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000196:435390..436175+

>ATCC10864_008199-T1 ID=ATCC10864_008199-T1|Name=ATCC10864_008199-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=786bp|location=Sequence derived from alignment at MCQH01000196:435390..436175+ (Aspergillus niger ATCC 10864)
ATGGCTCGCATTCTCATTACTGGCTCTGTCGATGGACTTGGCCTTGAGGC
TGCCAGACAGCTTGTCCACAGAGGCCACACTGTGTACCTGCATGCACGCA
ATCAACAACGTGCAATGGACGCGAAATCGGCATGTCCAGGTGCCGCCGGG
GTGTTGACGGCCGACTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCA
CGATGTTAACGCAATTGGAAATTTTGATGCTGTCATCCTCAACGCTGGAC
TCATGCAGGGTGGCTTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTG
GTGTCTGTCAACCTTATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCC
ACCGAAGCGCCTCATTTTCATTTCCTCAAACCTGCACCGGCAGGCAAACA
TGGCGAGCATGGATGACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTAC
CAGGACTACCCAGCATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGC
CAATGCAGTCGCTCGGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACC
CCGGATGGGTGGCGACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTG
GAGGACGGTGTCGAAACGTATGTCATGTTGGCCGAAGGGGATTATGATGA
ACAGAACCTGTCTGGAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGC
CGATTCCGGCTGCAAGAGATGAGGATCTGCAAGAGAAGGTGGTGCAAGCC
TGCGAAGAGGTTACTGGATTGAGACTGTCGGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008199ATCC10864_008199Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008199-T1.exon1ATCC10864_008199-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008199-T1.cdsATCC10864_008199-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008199-T1ATCC10864_008199-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13561
PFAMPF00106
InterProIPR002347
InterProIPR036291
Properties
Property NameValue
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
NoteantiSMASH:Cluster_1000196.2
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:435390..436175 +
Powered by Drupal