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ATCC10864_008205-T1, ATCC10864_008205-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008205-T1
Unique NameATCC10864_008205-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:446112..447922-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008205-T1 ID=ATCC10864_008205-T1|Name=ATCC10864_008205-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1811bp|location=Sequence derived from alignment at MCQH01000196:446112..447922- (Aspergillus niger ATCC 10864)
ATGTCGGGAAATAGGAAATCAGTCGAGGTCATGACAACAGGATACAAGGT
GGAGGTGGAGGCAGAAACGACGCCTTCTACACACATTCAAGGCGCAAGAC
TTCACACAATTACTGCTGCGTATGTGATTTCAAACTGATACCATCAATGC
CAACAGATGTTCTGACCGTCTAGCCTTGCCGTTTGTCTATTTCTAACTAA
TCTGGAAATCCCGATCGTGACAACCGCCTTGGTTCGAATCACCGGGGAAT
TGGGAGGTCTGAATAAAATATACTGGATTACTACAGCGTATATGCTAGGA
TATGCCGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACATATTTGGCCG
CAAGTCATGCCTACTGGTCGCTGTTTTTCTCTTCGTGGTGTTTTCCGGGG
CTTGCGGGGCAGCCCAAACCATGGAGCAACTGTAAGTCGACATACCTTGT
TCGGGCCCTTTGATAGTCAATGACCGTGTGCTGCACTAGGATCGTCTTTC
GTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCTCTGTGCTGCC
ATTCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACGTACATGAGTTC
ACTATCCCTGGTATACGCGATATCCTTACTATTTGGACCTCTGATGGGAG
GGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCTGTTGAATGTC
CCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTCCTGCCCAATCG
GTTCCCCTATCACAACGAACCATCCAAGGAGAAGACAATGTCATCCGTGC
TGGCATCATTGCGGCAAATGATTCAGAGAGTCGACTTACTCGGCTCCAGC
TTGCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTGGAGGAAGCCAA
TGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTGCTTATCATCT
CCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACGGGTGACACTC
TATTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTCGTTTGTAACCG
AGTCTGGGTCAGAATGTTGTTGTAGGTCTTCTTTCTCTGCCATTGTTAAC
CCGGCTATCTCATTAACTGGCATCTCTGCCACCCTAAGAAATTCCGTCTG
TCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAGCGGTTCC
AAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATTCATCCCT
TTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACCGGCTATCGGAAA
AGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCTTTGCTGC
AGGTGGTTGCTTACGTCCTTCTGTGCACTCTCCCCGACTCACTGTCGATC
ACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGTGTGGCAT
CAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGAAAAGCGAG
ACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCATGGGTGGT
TGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGGTTACCTGCAGTC
TCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTCCTGCACT
CCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCTAGTTCGC
GGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGGCGGGGTT
CGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGGGAACAAA
TCATCGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000196:446112..447922-

>ATCC10864_008205-T1 ID=ATCC10864_008205-T1|Name=ATCC10864_008205-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6528bp|location=Sequence derived from alignment at MCQH01000196:446112..447922- (Aspergillus niger ATCC 10864)
AAATTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTAC
CCCAGCGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTC
CGATTCATCCCTTTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACC
GGCTATCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCG
CGTCTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGTGCACTCTCCCCGAC
TCACTGTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTT
CGGGTGTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGA
TCGAAAAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGA
GTCATGGGTGGTTGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGG
TTACCTGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGT
TGGTCCTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAA
AGCCTAGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAAT
TTTGGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGC
AGAGGGAACAAATCATCGTCTAAGATCGTCTTTCGTGCTTTTCAGGGTGT
TGGCGGAGCGGGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTGG
TCCCGACAGAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATAC
GCGATATCCTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTC
GTCCACATGGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGG
CTGGGATAGGGCTCGCTCTGGTCCTGCCCAATCGGTTCCCCTATCACAAC
GAACCATCCAAGGAGAAGACAATGTCATCCGTGCTGGCATCATTGCGGCA
AATGATTCAGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAA
CAATTCTCCTGGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGG
AATTCGGCTTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGAT
CGCCTTTCTACTGTGGGAAAGACGGGTGACACTCTATTCTAAGCACATTG
AGCCGGTCTTTCCGTGGAGGTTCGTTTGTAACCGAGTCTGGGTCAGAATG
TTGTTCCTTGCCGTTTGTCTATTTCTAACTAATCTGGAAATCCCGATCGT
GACAACCGCCTTGGTTCGAATCACCGGGGAATTGGGAGGTCTGAATAAAA
TATACTGGATTACTACAGCGTATATGCTAGGATATGCCGGACTGCTTGTC
ATCTCGGCCAAGTTCAGCGACATATTTGGCCGCAAGTCATGCCTACTGGT
CGCTGTTTTTCTCTTCGTGGTGTTTTCCGGGGCTTGCGGGGCAGCCCAAA
CCATGGAGCAACTATGTCGGGAAATAGGAAATCAGTCGAGGTCATGACAA
CAGGATACAAGGTGGAGGTGGAGGCAGAAACGACGCCTTCTACACACATT
CAAGGCGCAAGACTTCACACAATTACTGCTGCAAATTCCGTCTGTCTGGG
GGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAGCGGTTCCAAATCG
TCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATTCATCCCTTTCACC
GTGGCGAGTCCCGTGGCATCCGTCCTGGCACCGGCTATCGGAAAAGTGTT
CAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCTTTGCTGCAGGTGG
TTGCTTACGTCCTTCTGTGCACTCTCCCCGACTCACTGTCGATCACCTCG
GCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGTGTGGCATCAACAT
CACCCTGCTGATCCTGATGACACCCTTCACGATCGAAAAGCGAGACAATG
CAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCATGGGTGGTTGCATT
GGAATTTCTGTGCTGACGGCAGTGGCCAATGGTTACCTGCAGTCTCACTT
GCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTCCTGCACTCCGCGG
AAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCTAGTTCGCGGGACC
TTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGGCGGGGTTCGCTGG
GGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGGGAACAAATCATCG
TCTAAGATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTA
TTCTCTCTGTGCTGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATG
CGACGTACATGAGTTCACTATCCCTGGTATACGCGATATCCTTACTATTT
GGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGT
GTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTC
TGGTCCTGCCCAATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAG
ACAATGTCATCCGTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGA
CTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGG
CTTTGGAGGAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATT
GTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGA
AAGACGGGTGACACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGA
GGTTCGTTTGTAACCGAGTCTGGGTCAGAATGTTGTTCCTTGCCGTTTGT
CTATTTCTAACTAATCTGGAAATCCCGATCGTGACAACCGCCTTGGTTCG
AATCACCGGGGAATTGGGAGGTCTGAATAAAATATACTGGATTACTACAG
CGTATATGCTAGGATATGCCGGACTGCTTGTCATCTCGGCCAAGTTCAGC
GACATATTTGGCCGCAAGTCATGCCTACTGGTCGCTGTTTTTCTCTTCGT
GGTGTTTTCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTATGTC
GGGAAATAGGAAATCAGTCGAGGTCATGACAACAGGATACAAGGTGGAGG
TGGAGGCAGAAACGACGCCTTCTACACACATTCAAGGCGCAAGACTTCAC
ACAATTACTGCTGCAAATTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGAC
CATGTTCCAGTTACCCCAGCGGTTCCAAATCGTCAACCAGCTTACGGCTT
TCCAAGCGGCTGTCCGATTCATCCCTTTCACCGTGGCGAGTCCCGTGGCA
TCCGTCCTGGCACCGGCTATCGGAAAAGTGTTCAAGATTCCGCTGCTATA
CCTGGTAATCTTCGCGTCTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGT
GCACTCTCCCCGACTCACTGTCGATCACCTCGGCGCAGTATGGATACCAG
GTCCTGGCCGGCTTCGGGTGTGGCATCAACATCACCCTGCTGATCCTGAT
GACACCCTTCACGATCGAAAAGCGAGACAATGCAGTCGCCATGGGGGCCA
TTACGCAGTTCCGAGTCATGGGTGGTTGCATTGGAATTTCTGTGCTGACG
GCAGTGGCCAATGGTTACCTGCAGTCTCACTTGCAGCAATGGCTCACCCC
GACCGAGATGCAGTTGGTCCTGCACTCCGCGGAAAGCCTTTCCACTCTCC
CAGCGTCAGCACAAAGCCTAGTTCGCGGGACCTTCTCGGCCAGTTACAAT
CTGCAGATGAAAATTTTGGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTC
GGTGCTTATGTGGCAGAGGGAACAAATCATCGTCTAAGATCGTCTTTCGT
GCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCTCTGTGCTGCCAT
TCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACGTACATGAGTTCAC
TATCCCTGGTATACGCGATATCCTTACTATTTGGACCTCTGATGGGAGGG
GGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCTGTTGAATGTCCC
TCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTCCTGCCCAATCGGT
TCCCCTATCACAACGAACCATCCAAGGAGAAGACAATGTCATCCGTGCTG
GCATCATTGCGGCAAATGATTCAGAGAGTCGACTTACTCGGCTCCAGCTT
GCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTGGAGGAAGCCAATG
AGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTGCTTATCATCTCC
GGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACGGGTGACACTCTA
TTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTCGTTTGTAACCGAG
TCTGGGTCAGAATGTTGTTCCTTGCCGTTTGTCTATTTCTAACTAATCTG
GAAATCCCGATCGTGACAACCGCCTTGGTTCGAATCACCGGGGAATTGGG
AGGTCTGAATAAAATATACTGGATTACTACAGCGTATATGCTAGGATATG
CCGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACATATTTGGCCGCAAG
TCATGCCTACTGGTCGCTGTTTTTCTCTTCGTGGTGTTTTCCGGGGCTTG
CGGGGCAGCCCAAACCATGGAGCAACTATGTCGGGAAATAGGAAATCAGT
CGAGGTCATGACAACAGGATACAAGGTGGAGGTGGAGGCAGAAACGACGC
CTTCTACACACATTCAAGGCGCAAGACTTCACACAATTACTGCTGCAAAT
TCCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCA
GCGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGAT
TCATCCCTTTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACCGGCT
ATCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTC
TTTGCTGCAGGTGGTTGCTTACGTCCTTCTGTGCACTCTCCCCGACTCAC
TGTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGG
TGTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGA
AAAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCA
TGGGTGGTTGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGGTTAC
CTGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGT
CCTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCC
TAGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTG
GCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAG
GGAACAAATCATCGTCTAAGATCGTCTTTCGTGCTTTTCAGGGTGTTGGC
GGAGCGGGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTGGTCCC
GACAGAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATACGCGA
TATCCTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCC
ACATGGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCTGG
GATAGGGCTCGCTCTGGTCCTGCCCAATCGGTTCCCCTATCACAACGAAC
CATCCAAGGAGAAGACAATGTCATCCGTGCTGGCATCATTGCGGCAAATG
ATTCAGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACAAT
TCTCCTGGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGGAATT
CGGCTTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCC
TTTCTACTGTGGGAAAGACGGGTGACACTCTATTCTAAGCACATTGAGCC
GGTCTTTCCGTGGAGGTTCGTTTGTAACCGAGTCTGGGTCAGAATGTTGT
TCCTTGCCGTTTGTCTATTTCTAACTAATCTGGAAATCCCGATCGTGACA
ACCGCCTTGGTTCGAATCACCGGGGAATTGGGAGGTCTGAATAAAATATA
CTGGATTACTACAGCGTATATGCTAGGATATGCCGGACTGCTTGTCATCT
CGGCCAAGTTCAGCGACATATTTGGCCGCAAGTCATGCCTACTGGTCGCT
GTTTTTCTCTTCGTGGTGTTTTCCGGGGCTTGCGGGGCAGCCCAAACCAT
GGAGCAACTATGTCGGGAAATAGGAAATCAGTCGAGGTCATGACAACAGG
ATACAAGGTGGAGGTGGAGGCAGAAACGACGCCTTCTACACACATTCAAG
GCGCAAGACTTCACACAATTACTGCTGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008205ATCC10864_008205Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008205-T1ATCC10864_008205-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008205-T1.cdsATCC10864_008205-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008205-T1.exon4ATCC10864_008205-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008205-T1.exon3ATCC10864_008205-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008205-T1.exon2ATCC10864_008205-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008205-T1.exon1ATCC10864_008205-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
PFAMPF07690
InterProIPR020846
InterProIPR005829
InterProIPR011701
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000196.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:446112..447922 -
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