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ATCC10864_008237-T1, ATCC10864_008237-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008237-T1
Unique NameATCC10864_008237-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:24201..25868+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008237-T1 ID=ATCC10864_008237-T1|Name=ATCC10864_008237-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1668bp|location=Sequence derived from alignment at MCQH01000199:24201..25868+ (Aspergillus niger ATCC 10864)
ATGGCTGCTCGTGGTTGGCGATTCTGGCTGATTATTGCTGGACTGTCAAT
AACATCCCTCCTCACTGCGATCGAATGTACGGTTCCATCGACTGCTCTGC
CCACGATCTCGCGCGATTTGAACGCAGGAGAGTCGTATGTTTGGTTTGTC
AACGCACTCTTTCTATCAAGGTATTGACTCTCTCTCCTCCGCACGTCTTC
TTTCTTCCTGTAACGCTAAATCGTCCGCCATGGCCCTTTCAGTACCGCCG
TCCAGCCGCTCTTTGGACAATTGGCCGACGTCTTCGGTCGACGATGGCCC
CTGATCTCCGCAGTGGCTTTCTTTGCTCTAGGCAGTGGCATCAGCGGTGG
TGCCAGTTCGACCGCGATGCTTATTGCCGGGCGCACAATCCAGGGAGTGG
GCCTCGGAGGTGTCAACATGCTCATCGACGTGGTCGTCTGTGATCTCGTC
CCCTTACGCGAGCGAGGCCAAGTGACCGCCCTCATCTTCGTCGTGTTCGC
CGTGGGATCGTCCATCGGGCCCTTCATCGGGGGTGCCTTTACACAGCACG
TCACCTGGCGGTGGGCATTCTATATCAGTCTTCCAATCGCCGGCAGCGCG
ATGGTGTTCATGATCCTCTTCCTCCAGGTCAAATCTCAGAAGCACACCAC
CTTCGCGGACAAGATGAAACGCATTGACTGGCTAGGTAATACTATACTGG
TCGCCGCGGTGGTAGCAGTTCTCATCGCGCTCAGTTTCGGTGGCACCTCA
TACCCCTGGTCAAGCTGGCGTGTCATTGTGCCGTTAGTGCTGGGACTCAT
TGGACTGATCGCCTTCGCCCTGGTGCAGGTGACGCCCAAGCTCTGTCCAG
AGCCAACCATGCCCCCTCGTCTCTTCGCGAACCGCACCACCTTTGCCGCG
TTCGTTATCAGCTTTCTGCATGGGATGCTGATGTACTGGGAGCTATACTT
CCTGCCGGTATACTTCCAAGGAGTTCAGCTAAGCACGTCGACTCGATCCG
GAGTGGAATTGTTGCCCACTGTAATCGTCACTGTCCCTGCCGCCATCGTT
GCCGGTGCTCTTGTTACTAAGACCGGCCGGTACAAGCCCATACAAATCAG
TGGCTTCGCCTTCATGGCCCTCGGCATGGGCCTCTTCAGCCTTCTCGACC
AGAACTCCAGCACAGGAGCCTGGGTCGGCTACCAGCTGCTAGCGGCCATT
GGCTCAGGCTTCATCGTCACCTCAACCCTGCCAGCTGCCCAGGCCGCGCT
GTCCGAGGCTGACGTGGCCACCTCGACAGCAACCTGGGCATTTTGCCGCG
CATTTGGCGCCGTCTGGGGCGTCTCCATCCCGGCCGCTATCTTCAATAAT
CGATTCGCCGCGCAGGTGAGCGCGCAGAACGATACGGGACACGCGGCGCA
GGTGCTACAAAACACGGGTAACGCGTACCAGCAAGCCTCGCGGGAATTTG
TCATGCAATTTTCGCCCGAGGTTCAATCGATGATTATCGACGCGTATACC
GCAGCGCTCCAGCGAGTGTGGCAGATTTCTGTGGTGTTTGCTGGACTAGG
CTTCTTATTTGCGTGGCTGGAGAAGGAGGTGGAGTTGCGAACCACGCTGG
AGACAGAATACGGGCCGGAAAAGAAAGAGCCGTCGCCCGAGGTGGAGGAC
GTTACAGTGTCCAAGTGA
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Coding sequence (CDS) from alignment at MCQH01000199:24201..25868+

>ATCC10864_008237-T1 ID=ATCC10864_008237-T1|Name=ATCC10864_008237-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3192bp|location=Sequence derived from alignment at MCQH01000199:24201..25868+ (Aspergillus niger ATCC 10864)
ATGGCTGCTCGTGGTTGGCGATTCTGGCTGATTATTGCTGGACTGTCAAT
AACATCCCTCCTCACTGCGATCGAATGTACGGTTCCATCGACTGCTCTGC
CCACGATCTCGCGCGATTTGAACGCAGGAGAGTCGTATGTTTGGTTTGTC
AACGCACTCTTTCTATCAAGTACCGCCGTCCAGCCGCTCTTTGGACAATT
GGCCGACGTCTTCGGTCGACGATGGCCCCTGATCTCCGCAGTGGCTTTCT
TTGCTCTAGGCAGTGGCATCAGCGGTGGTGCCAGTTCGACCGCGATGCTT
ATTGCCGGGCGCACAATCCAGGGAGTGGGCCTCGGAGGTGTCAACATGCT
CATCGACGTGGTCGTCTGTGATCTCGTCCCCTTACGCGAGCGAGGCCAAG
TGACCGCCCTCATCTTCGTCGTGTTCGCCGTGGGATCGTCCATCGGGCCC
TTCATCGGGGGTGCCTTTACACAGCACGTCACCTGGCGGTGGGCATTCTA
TATCAGTCTTCCAATCGCCGGCAGCGCGATGGTGTTCATGATCCTCTTCC
TCCAGGTCAAATCTCAGAAGCACACCACCTTCGCGGACAAGATGAAACGC
ATTGACTGGCTAGGTAATACTATACTGGTCGCCGCGGTGGTAGCAGTTCT
CATCGCGCTCAGTTTCGGTGGCACCTCATACCCCTGGTCAAGCTGGCGTG
TCATTGTGCCGTTAGTGCTGGGACTCATTGGACTGATCGCCTTCGCCCTG
GTGCAGGTGACGCCCAAGCTCTGTCCAGAGCCAACCATGCCCCCTCGTCT
CTTCGCGAACCGCACCACCTTTGCCGCGTTCGTTATCAGCTTTCTGCATG
GGATGCTGATGTACTGGGAGCTATACTTCCTGCCGGTATACTTCCAAGGA
GTTCAGCTAAGCACGTCGACTCGATCCGGAGTGGAATTGTTGCCCACTGT
AATCGTCACTGTCCCTGCCGCCATCGTTGCCGGTGCTCTTGTTACTAAGA
CCGGCCGGTACAAGCCCATACAAATCAGTGGCTTCGCCTTCATGGCCCTC
GGCATGGGCCTCTTCAGCCTTCTCGACCAGAACTCCAGCACAGGAGCCTG
GGTCGGCTACCAGCTGCTAGCGGCCATTGGCTCAGGCTTCATCGTCACCT
CAACCCTGCCAGCTGCCCAGGCCGCGCTGTCCGAGGCTGACGTGGCCACC
TCGACAGCAACCTGGGCATTTTGCCGCGCATTTGGCGCCGTCTGGGGCGT
CTCCATCCCGGCCGCTATCTTCAATAATCGATTCGCCGCGCAGGTGAGCG
CGCAGAACGATACGGGACACGCGGCGCAGGTGCTACAAAACACGGGTAAC
GCGTACCAGCAAGCCTCGCGGGAATTTGTCATGCAATTTTCGCCCGAGGT
TCAATCGATGATTATCGACGCGTATACCGCAGCGCTCCAGCGAGTGTGGC
AGATTTCTGTGGTGTTTGCTGGACTAGGCTTCTTATTTGCGTGGCTGGAG
AAGGAGGTGGAGTTGCGAACCACGCTGGAGACAGAATACGGGCCGGAAAA
GAAAGAGCCGTCGCCCGAGGTGGAGGACGTTACAGTGTCCAAGTGAATGG
CTGCTCGTGGTTGGCGATTCTGGCTGATTATTGCTGGACTGTCAATAACA
TCCCTCCTCACTGCGATCGAATGTACGGTTCCATCGACTGCTCTGCCCAC
GATCTCGCGCGATTTGAACGCAGGAGAGTCGTATGTTTGGTTTGTCAACG
CACTCTTTCTATCAAGTACCGCCGTCCAGCCGCTCTTTGGACAATTGGCC
GACGTCTTCGGTCGACGATGGCCCCTGATCTCCGCAGTGGCTTTCTTTGC
TCTAGGCAGTGGCATCAGCGGTGGTGCCAGTTCGACCGCGATGCTTATTG
CCGGGCGCACAATCCAGGGAGTGGGCCTCGGAGGTGTCAACATGCTCATC
GACGTGGTCGTCTGTGATCTCGTCCCCTTACGCGAGCGAGGCCAAGTGAC
CGCCCTCATCTTCGTCGTGTTCGCCGTGGGATCGTCCATCGGGCCCTTCA
TCGGGGGTGCCTTTACACAGCACGTCACCTGGCGGTGGGCATTCTATATC
AGTCTTCCAATCGCCGGCAGCGCGATGGTGTTCATGATCCTCTTCCTCCA
GGTCAAATCTCAGAAGCACACCACCTTCGCGGACAAGATGAAACGCATTG
ACTGGCTAGGTAATACTATACTGGTCGCCGCGGTGGTAGCAGTTCTCATC
GCGCTCAGTTTCGGTGGCACCTCATACCCCTGGTCAAGCTGGCGTGTCAT
TGTGCCGTTAGTGCTGGGACTCATTGGACTGATCGCCTTCGCCCTGGTGC
AGGTGACGCCCAAGCTCTGTCCAGAGCCAACCATGCCCCCTCGTCTCTTC
GCGAACCGCACCACCTTTGCCGCGTTCGTTATCAGCTTTCTGCATGGGAT
GCTGATGTACTGGGAGCTATACTTCCTGCCGGTATACTTCCAAGGAGTTC
AGCTAAGCACGTCGACTCGATCCGGAGTGGAATTGTTGCCCACTGTAATC
GTCACTGTCCCTGCCGCCATCGTTGCCGGTGCTCTTGTTACTAAGACCGG
CCGGTACAAGCCCATACAAATCAGTGGCTTCGCCTTCATGGCCCTCGGCA
TGGGCCTCTTCAGCCTTCTCGACCAGAACTCCAGCACAGGAGCCTGGGTC
GGCTACCAGCTGCTAGCGGCCATTGGCTCAGGCTTCATCGTCACCTCAAC
CCTGCCAGCTGCCCAGGCCGCGCTGTCCGAGGCTGACGTGGCCACCTCGA
CAGCAACCTGGGCATTTTGCCGCGCATTTGGCGCCGTCTGGGGCGTCTCC
ATCCCGGCCGCTATCTTCAATAATCGATTCGCCGCGCAGGTGAGCGCGCA
GAACGATACGGGACACGCGGCGCAGGTGCTACAAAACACGGGTAACGCGT
ACCAGCAAGCCTCGCGGGAATTTGTCATGCAATTTTCGCCCGAGGTTCAA
TCGATGATTATCGACGCGTATACCGCAGCGCTCCAGCGAGTGTGGCAGAT
TTCTGTGGTGTTTGCTGGACTAGGCTTCTTATTTGCGTGGCTGGAGAAGG
AGGTGGAGTTGCGAACCACGCTGGAGACAGAATACGGGCCGGAAAAGAAA
GAGCCGTCGCCCGAGGTGGAGGACGTTACAGTGTCCAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008237ATCC10864_008237Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008237-T1.exon1ATCC10864_008237-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008237-T1.exon2ATCC10864_008237-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008237-T1.cdsATCC10864_008237-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008237-T1ATCC10864_008237-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000199.1
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:24201..25868 +
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