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ATCC10864_008239-T1, ATCC10864_008239-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008239-T1
Unique NameATCC10864_008239-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:28985..30930+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008239-T1 ID=ATCC10864_008239-T1|Name=ATCC10864_008239-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1946bp|location=Sequence derived from alignment at MCQH01000199:28985..30930+ (Aspergillus niger ATCC 10864)
ATGTCAGATCCACAGCCAACCTCTCGCCGCAGGTTCAAGACTCGCAGTGA
GTATCTGAGCCATGGGATAATGACATTGCGGAAACTGACACGCCTCTGAT
GCCAGATGGCTGTCTAAGATGCAAACAAAGGGTGGGTGTAACAAACCCAA
TTGTGTCTACCTCCTAATATCCAGGCTAAGTTAGTTGACAGCGAATCAAA
TGCGACGAGACGCTTCCTGTGTGTAATCAATGTACCCGCAAACGCTTCGA
ATGCCCGGGATACAAACGCCCATTGAAGTGGTCGTCCAAGTATGAGGTGG
GGAGAAGTGGGAATAATAGCGCAGTCCTGAGCTCCTCCGAGCAGGTGCTC
CAAAGAATAGAGCCCGTCCAGCCATTACGACCCATCTTGTTCCAGTCCAC
AGTGCCGGACGACGCCACACGCTCCCTGCCTGTGCAGACAGATGTCCAGC
CCGCGCAGAATGAGACTGCTGTTGGATCAGACCAGGCCTCAATCTCTGCG
GCAAACAGTTCGCCACCGAAAGATATCTGGATCCCTTCGACTATGGTAGG
TAATGATTGTGGTGAATTATGGACAGGAACCATATTAGCGGAACCGACTT
TGTCTACCCAAAAAGACGATGACGCAGCTCTTCTCAGGCATTACTTTTCC
AATGTTTGCCGAGTCAATTCGTGCTTTGACTCCCACAAGAACTTCTTCCG
TGCCGAAGTGGGATCCCTGATAAGCTCCCGTCCTCTGATTCACTACTGCG
TACTGTCCATGTCCGCCGCCCATCTGACGGCAAGACAAAGAGATATGTTG
ACGATCACGCTGCGGCACCGGACAGAAGCACTATCCTGCTTGAAAGCTAG
AATCACACAGGGGGTTTTGACACAAGAAATAAACAATGGATCACCACTCG
ATAACGTTGCCGAGATCTTAATTGGTAGCATACTCTTGGGCATGACAGAG
GTACCCATTCTCAGTGCGTCCATGCCAGCCTTTTGATGTTAAGCTGATGG
CCTTTCGTAGGGGTGGCATGATCCCACTCAACTCGGGGTCACACATCTCC
GTGGTGCACGCACGTTGTTCCGGAAATGGATTACTACCGTCCCGGCATGC
TGCCCTCGGACCAGAACTATGATTACGGGCATTATGTCCTACTGGGAAGC
AGTCGCCTCGTTTGTACACAACCAGTCCCTAGACTCGATATCCTACCTCA
TGCCATTCTCCTTCGAGACATGCCATGTATACGTCAATCCATGGACAGGG
ATCTGCACGCCACTTTTTATACATTTGGCCCAGATTGGTATATTGACAAG
GCAGCGATCGCTAGCCAGACAATTGCCTGTAGGCTTTTGGGGCCATGTAG
GCCCCGACATGCTTGAACGGGCTAAAGCCATTGAAGATGCGCTCCAATCC
TACAGAACCCTATCAATCCACCAGATAGAAGACACAGCTGATTCCCGGAC
GCCTGTCGACCACCTCCAGCGAATTGCAAGCATCTACCGGCTTGTAGGAT
TACTTCAGCTCTACATGACCTTCCCTGAACTGCATGGAGCCCACTCTGTG
GATTTTAGCCTAACCCACAGCATCTTGGGCCTGGCCACCAATGTGCTAAC
CACCATTGGCGTGCTTCCCCACACGTCTGGGGTTTACTGTTTGCTCACGA
TTCCATTGATTATCGCGGGTAGCGCTTTGCAACTTCCTTGTTTCTCGTCG
GACGTCCCCACTTCCATGTTGCAGCAAGATACCTATCTCTTCTGGAGGAA
CTTCGTGCGGGAGAGGGTAAAGACCGTTCAGGAGATTGTAGGACTCGTTA
CCATTGGCCGCGCGCAGAAGATCCTCGATAAGGTGTGGTTTCTAGCCGAC
ATGCGGAGGGCCGCTGAGGATCCTGACCAGGAATGGGAGTACATCCAGTG
GACCGAGGTCATGAGCTCCGAGAATTTGGAGTCAATCTTTGGTTAG
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Coding sequence (CDS) from alignment at MCQH01000199:28985..30930+

>ATCC10864_008239-T1 ID=ATCC10864_008239-T1|Name=ATCC10864_008239-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7068bp|location=Sequence derived from alignment at MCQH01000199:28985..30930+ (Aspergillus niger ATCC 10864)
ATGTCAGATCCACAGCCAACCTCTCGCCGCAGGTTCAAGACTCGCAATGG
CTGTCTAAGATGCAAACAAAGGCGAATCAAATGCGACGAGACGCTTCCTG
TGTGTAATCAATGTACCCGCAAACGCTTCGAATGCCCGGGATACAAACGC
CCATTGAAGTGGTCGTCCAAGTATGAGGTGGGGAGAAGTGGGAATAATAG
CGCAGTCCTGAGCTCCTCCGAGCAGGTGCTCCAAAGAATAGAGCCCGTCC
AGCCATTACGACCCATCTTGTTCCAGTCCACAGTGCCGGACGACGCCACA
CGCTCCCTGCCTGTGCAGACAGATGTCCAGCCCGCGCAGAATGAGACTGC
TGTTGGATCAGACCAGGCCTCAATCTCTGCGGCAAACAGTTCGCCACCGA
AAGATATCTGGATCCCTTCGACTATGGTAGGTAATGATTGTGGTGAATTA
TGGACAGGAACCATATTAGCGGAACCGACTTTGTCTACCCAAAAAGACGA
TGACGCAGCTCTTCTCAGGCATTACTTTTCCAATGTTTGCCGAGTCAATT
CGTGCTTTGACTCCCACAAGAACTTCTTCCGTGCCGAAGTGGGATCCCTG
ATAAGCTCCCGTCCTCTGATTCACTACTGCGTACTGTCCATGTCCGCCGC
CCATCTGACGGCAAGACAAAGAGATATGTTGACGATCACGCTGCGGCACC
GGACAGAAGCACTATCCTGCTTGAAAGCTAGAATCACACAGGGGGTTTTG
ACACAAGAAATAAACAATGGATCACCACTCGATAACGTTGCCGAGATCTT
AATTGGTAGCATACTCTTGGGCATGACAGAGGGGTGGCATGATCCCACTC
AACTCGGGGTCACACATCTCCGTGGTGCACGCACGTTGTTCCGGAAATGG
ATTACTACCGTCCCGGCATGCTGCCCTCGGACCAGAACTATGATTACGGG
CATTATGTCCTACTGGGAAGCAGTCGCCTCGTTTGTACACAACCAGTCCC
TAGACTCGATATCCTACCTCATGCCATTCTCCTTCGAGACATGCCATGTA
TACGTCAATCCATGGACAGGGATCTGCACGCCACTTTTTATACATTTGGC
CCAGATTGGTATATTGACAAGGCAGCGATCGCTAGCCAGACAATTGCCTG
TAGGCTTTTGGGGCCATGTAGGCCCCGACATGCTTGAACGGGCTAAAGCC
ATTGAAGATGCGCTCCAATCCTACAGAACCCTATCAATCCACCAGATAGA
AGACACAGCTGATTCCCGGACGCCTGTCGACCACCTCCAGCGAATTGCAA
GCATCTACCGGCTTGTAGGATTACTTCAGCTCTACATGACCTTCCCTGAA
CTGCATGGAGCCCACTCTGTGGATTTTAGCCTAACCCACAGCATCTTGGG
CCTGGCCACCAATGTGCTAACCACCATTGGCGTGCTTCCCCACACGTCTG
GGGTTTACTGTTTGCTCACGATTCCATTGATTATCGCGGGTAGCGCTTTG
CAACTTCCTTGTTTCTCGTCGGACGTCCCCACTTCCATGTTGCAGCAAGA
TACCTATCTCTTCTGGAGGAACTTCGTGCGGGAGAGGGTAAAGACCGTTC
AGGAGATTGTAGGACTCGTTACCATTGGCCGCGCGCAGAAGATCCTCGAT
AAGGTGTGGTTTCTAGCCGACATGCGGAGGGCCGCTGAGGATCCTGACCA
GGAATGGGAGTACATCCAGTGGACCGAGGTCATGAGCTCCGAGAATTTGG
AGTCAATCTTTGGTTAGATGTCAGATCCACAGCCAACCTCTCGCCGCAGG
TTCAAGACTCGCAATGGCTGTCTAAGATGCAAACAAAGGCGAATCAAATG
CGACGAGACGCTTCCTGTGTGTAATCAATGTACCCGCAAACGCTTCGAAT
GCCCGGGATACAAACGCCCATTGAAGTGGTCGTCCAAGTATGAGGTGGGG
AGAAGTGGGAATAATAGCGCAGTCCTGAGCTCCTCCGAGCAGGTGCTCCA
AAGAATAGAGCCCGTCCAGCCATTACGACCCATCTTGTTCCAGTCCACAG
TGCCGGACGACGCCACACGCTCCCTGCCTGTGCAGACAGATGTCCAGCCC
GCGCAGAATGAGACTGCTGTTGGATCAGACCAGGCCTCAATCTCTGCGGC
AAACAGTTCGCCACCGAAAGATATCTGGATCCCTTCGACTATGGTAGGTA
ATGATTGTGGTGAATTATGGACAGGAACCATATTAGCGGAACCGACTTTG
TCTACCCAAAAAGACGATGACGCAGCTCTTCTCAGGCATTACTTTTCCAA
TGTTTGCCGAGTCAATTCGTGCTTTGACTCCCACAAGAACTTCTTCCGTG
CCGAAGTGGGATCCCTGATAAGCTCCCGTCCTCTGATTCACTACTGCGTA
CTGTCCATGTCCGCCGCCCATCTGACGGCAAGACAAAGAGATATGTTGAC
GATCACGCTGCGGCACCGGACAGAAGCACTATCCTGCTTGAAAGCTAGAA
TCACACAGGGGGTTTTGACACAAGAAATAAACAATGGATCACCACTCGAT
AACGTTGCCGAGATCTTAATTGGTAGCATACTCTTGGGCATGACAGAGGG
GTGGCATGATCCCACTCAACTCGGGGTCACACATCTCCGTGGTGCACGCA
CGTTGTTCCGGAAATGGATTACTACCGTCCCGGCATGCTGCCCTCGGACC
AGAACTATGATTACGGGCATTATGTCCTACTGGGAAGCAGTCGCCTCGTT
TGTACACAACCAGTCCCTAGACTCGATATCCTACCTCATGCCATTCTCCT
TCGAGACATGCCATGTATACGTCAATCCATGGACAGGGATCTGCACGCCA
CTTTTTATACATTTGGCCCAGATTGGTATATTGACAAGGCAGCGATCGCT
AGCCAGACAATTGCCTGTAGGCTTTTGGGGCCATGTAGGCCCCGACATGC
TTGAACGGGCTAAAGCCATTGAAGATGCGCTCCAATCCTACAGAACCCTA
TCAATCCACCAGATAGAAGACACAGCTGATTCCCGGACGCCTGTCGACCA
CCTCCAGCGAATTGCAAGCATCTACCGGCTTGTAGGATTACTTCAGCTCT
ACATGACCTTCCCTGAACTGCATGGAGCCCACTCTGTGGATTTTAGCCTA
ACCCACAGCATCTTGGGCCTGGCCACCAATGTGCTAACCACCATTGGCGT
GCTTCCCCACACGTCTGGGGTTTACTGTTTGCTCACGATTCCATTGATTA
TCGCGGGTAGCGCTTTGCAACTTCCTTGTTTCTCGTCGGACGTCCCCACT
TCCATGTTGCAGCAAGATACCTATCTCTTCTGGAGGAACTTCGTGCGGGA
GAGGGTAAAGACCGTTCAGGAGATTGTAGGACTCGTTACCATTGGCCGCG
CGCAGAAGATCCTCGATAAGGTGTGGTTTCTAGCCGACATGCGGAGGGCC
GCTGAGGATCCTGACCAGGAATGGGAGTACATCCAGTGGACCGAGGTCAT
GAGCTCCGAGAATTTGGAGTCAATCTTTGGTTAGATGTCAGATCCACAGC
CAACCTCTCGCCGCAGGTTCAAGACTCGCAATGGCTGTCTAAGATGCAAA
CAAAGGCGAATCAAATGCGACGAGACGCTTCCTGTGTGTAATCAATGTAC
CCGCAAACGCTTCGAATGCCCGGGATACAAACGCCCATTGAAGTGGTCGT
CCAAGTATGAGGTGGGGAGAAGTGGGAATAATAGCGCAGTCCTGAGCTCC
TCCGAGCAGGTGCTCCAAAGAATAGAGCCCGTCCAGCCATTACGACCCAT
CTTGTTCCAGTCCACAGTGCCGGACGACGCCACACGCTCCCTGCCTGTGC
AGACAGATGTCCAGCCCGCGCAGAATGAGACTGCTGTTGGATCAGACCAG
GCCTCAATCTCTGCGGCAAACAGTTCGCCACCGAAAGATATCTGGATCCC
TTCGACTATGGTAGGTAATGATTGTGGTGAATTATGGACAGGAACCATAT
TAGCGGAACCGACTTTGTCTACCCAAAAAGACGATGACGCAGCTCTTCTC
AGGCATTACTTTTCCAATGTTTGCCGAGTCAATTCGTGCTTTGACTCCCA
CAAGAACTTCTTCCGTGCCGAAGTGGGATCCCTGATAAGCTCCCGTCCTC
TGATTCACTACTGCGTACTGTCCATGTCCGCCGCCCATCTGACGGCAAGA
CAAAGAGATATGTTGACGATCACGCTGCGGCACCGGACAGAAGCACTATC
CTGCTTGAAAGCTAGAATCACACAGGGGGTTTTGACACAAGAAATAAACA
ATGGATCACCACTCGATAACGTTGCCGAGATCTTAATTGGTAGCATACTC
TTGGGCATGACAGAGGGGTGGCATGATCCCACTCAACTCGGGGTCACACA
TCTCCGTGGTGCACGCACGTTGTTCCGGAAATGGATTACTACCGTCCCGG
CATGCTGCCCTCGGACCAGAACTATGATTACGGGCATTATGTCCTACTGG
GAAGCAGTCGCCTCGTTTGTACACAACCAGTCCCTAGACTCGATATCCTA
CCTCATGCCATTCTCCTTCGAGACATGCCATGTATACGTCAATCCATGGA
CAGGGATCTGCACGCCACTTTTTATACATTTGGCCCAGATTGGTATATTG
ACAAGGCAGCGATCGCTAGCCAGACAATTGCCTGTAGGCTTTTGGGGCCA
TGTAGGCCCCGACATGCTTGAACGGGCTAAAGCCATTGAAGATGCGCTCC
AATCCTACAGAACCCTATCAATCCACCAGATAGAAGACACAGCTGATTCC
CGGACGCCTGTCGACCACCTCCAGCGAATTGCAAGCATCTACCGGCTTGT
AGGATTACTTCAGCTCTACATGACCTTCCCTGAACTGCATGGAGCCCACT
CTGTGGATTTTAGCCTAACCCACAGCATCTTGGGCCTGGCCACCAATGTG
CTAACCACCATTGGCGTGCTTCCCCACACGTCTGGGGTTTACTGTTTGCT
CACGATTCCATTGATTATCGCGGGTAGCGCTTTGCAACTTCCTTGTTTCT
CGTCGGACGTCCCCACTTCCATGTTGCAGCAAGATACCTATCTCTTCTGG
AGGAACTTCGTGCGGGAGAGGGTAAAGACCGTTCAGGAGATTGTAGGACT
CGTTACCATTGGCCGCGCGCAGAAGATCCTCGATAAGGTGTGGTTTCTAG
CCGACATGCGGAGGGCCGCTGAGGATCCTGACCAGGAATGGGAGTACATC
CAGTGGACCGAGGTCATGAGCTCCGAGAATTTGGAGTCAATCTTTGGTTA
GATGTCAGATCCACAGCCAACCTCTCGCCGCAGGTTCAAGACTCGCAATG
GCTGTCTAAGATGCAAACAAAGGCGAATCAAATGCGACGAGACGCTTCCT
GTGTGTAATCAATGTACCCGCAAACGCTTCGAATGCCCGGGATACAAACG
CCCATTGAAGTGGTCGTCCAAGTATGAGGTGGGGAGAAGTGGGAATAATA
GCGCAGTCCTGAGCTCCTCCGAGCAGGTGCTCCAAAGAATAGAGCCCGTC
CAGCCATTACGACCCATCTTGTTCCAGTCCACAGTGCCGGACGACGCCAC
ACGCTCCCTGCCTGTGCAGACAGATGTCCAGCCCGCGCAGAATGAGACTG
CTGTTGGATCAGACCAGGCCTCAATCTCTGCGGCAAACAGTTCGCCACCG
AAAGATATCTGGATCCCTTCGACTATGGTAGGTAATGATTGTGGTGAATT
ATGGACAGGAACCATATTAGCGGAACCGACTTTGTCTACCCAAAAAGACG
ATGACGCAGCTCTTCTCAGGCATTACTTTTCCAATGTTTGCCGAGTCAAT
TCGTGCTTTGACTCCCACAAGAACTTCTTCCGTGCCGAAGTGGGATCCCT
GATAAGCTCCCGTCCTCTGATTCACTACTGCGTACTGTCCATGTCCGCCG
CCCATCTGACGGCAAGACAAAGAGATATGTTGACGATCACGCTGCGGCAC
CGGACAGAAGCACTATCCTGCTTGAAAGCTAGAATCACACAGGGGGTTTT
GACACAAGAAATAAACAATGGATCACCACTCGATAACGTTGCCGAGATCT
TAATTGGTAGCATACTCTTGGGCATGACAGAGGGGTGGCATGATCCCACT
CAACTCGGGGTCACACATCTCCGTGGTGCACGCACGTTGTTCCGGAAATG
GATTACTACCGTCCCGGCATGCTGCCCTCGGACCAGAACTATGATTACGG
GCATTATGTCCTACTGGGAAGCAGTCGCCTCGTTTGTACACAACCAGTCC
CTAGACTCGATATCCTACCTCATGCCATTCTCCTTCGAGACATGCCATGT
ATACGTCAATCCATGGACAGGGATCTGCACGCCACTTTTTATACATTTGG
CCCAGATTGGTATATTGACAAGGCAGCGATCGCTAGCCAGACAATTGCCT
GTAGGCTTTTGGGGCCATGTAGGCCCCGACATGCTTGAACGGGCTAAAGC
CATTGAAGATGCGCTCCAATCCTACAGAACCCTATCAATCCACCAGATAG
AAGACACAGCTGATTCCCGGACGCCTGTCGACCACCTCCAGCGAATTGCA
AGCATCTACCGGCTTGTAGGATTACTTCAGCTCTACATGACCTTCCCTGA
ACTGCATGGAGCCCACTCTGTGGATTTTAGCCTAACCCACAGCATCTTGG
GCCTGGCCACCAATGTGCTAACCACCATTGGCGTGCTTCCCCACACGTCT
GGGGTTTACTGTTTGCTCACGATTCCATTGATTATCGCGGGTAGCGCTTT
GCAACTTCCTTGTTTCTCGTCGGACGTCCCCACTTCCATGTTGCAGCAAG
ATACCTATCTCTTCTGGAGGAACTTCGTGCGGGAGAGGGTAAAGACCGTT
CAGGAGATTGTAGGACTCGTTACCATTGGCCGCGCGCAGAAGATCCTCGA
TAAGGTGTGGTTTCTAGCCGACATGCGGAGGGCCGCTGAGGATCCTGACC
AGGAATGGGAGTACATCCAGTGGACCGAGGTCATGAGCTCCGAGAATTTG
GAGTCAATCTTTGGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008239ATCC10864_008239Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008239-T1.exon1ATCC10864_008239-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008239-T1.exon2ATCC10864_008239-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008239-T1.exon3ATCC10864_008239-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008239-T1.exon4ATCC10864_008239-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008239-T1.cdsATCC10864_008239-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008239-T1ATCC10864_008239-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
PFAMPF11951
InterProIPR001138
InterProIPR036864
InterProIPR021858
Properties
Property NameValue
NoteantiSMASH:Cluster_1000199.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:28985..30930 +
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