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ATCC10864_008269-T1, ATCC10864_008269-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008269-T1
Unique NameATCC10864_008269-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:148888..151146-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008269-T1 ID=ATCC10864_008269-T1|Name=ATCC10864_008269-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2259bp|location=Sequence derived from alignment at MCQH01000199:148888..151146- (Aspergillus niger ATCC 10864)
ATGTCGGTCCCTAGGCCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGG
CCCAAGGCCACCTATGGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAA
CTCCCATCAGGCGTCCCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCA
ACTACCCACCCCAAAACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCC
TCACATCGTTGAGGATGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTG
TCATCAGTGAAGCAAACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCG
TCGGGTGCGGCAGTCGTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCA
TGTCCGCAGTTATGGCCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCG
AGATTACGGAACAGAACGGCAATCGGTACATCACCCAGCTGTCTCGTGCC
TTGACTATCCCAGAGAGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCT
AGCAGTCGGATTGAACTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTG
CTGTATGCTTATATATTGCCTGCCGTCGGCAGGATGGCAACACCATCATG
CTCATCGATTTTGCCGATGTTCTCATGATCAACGTGTTCAAGCTCGGTCG
GACCTACAAAGCACTACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTC
TGATGAACCCGATTGATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAG
CTTGAATTTGGGTCGGCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTAT
CGTACAGCGAATGAACCGCGATTGGATGACGACGGGTCGTCGTCCCGCTG
GTATTTGTGGTGCCGCCTTGATCCTTGCAGCCCGAATGAACAACTTTCGC
CGCACCGTTCGAGAGGTTGTCTACGTCGTCAAAGTCACCGAGATCACTAT
CAGCCAACGTTTGAACGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAG
TCGACCAGTTCCGTTCCGTGCAGCTGGAGAATGCGCATGACCCACCTTCT
TTTGCCAGGGCTAGAGAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACG
GCCCACGGAAACGGCTGCGGAGATTGAGGGTGATATACAAGAAGCACAGC
AACATAGGCGTGTCGACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATT
GACCCGGCATTACTAGCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGC
CTCTGCTGCAAGCGAAGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGT
CCGGTCGCCAGAAGGGTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCA
GATCAGATTGCCTCGGAAGAGGCTTTGGAGAATGAAATGACCGCGCTATT
ATCCAAAGGATCGAACATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGG
TCGTGTCTGATAATACGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCG
GAGGTGTCTAACTGCTTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACG
GATTTGGGTCCATGAGAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAG
CGCTAAAGCGAGCTCTGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGT
CGCGTGCACAAGCCGCGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAAC
TTATCTTGAAGGCGAGGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTT
CGACCCCTGCCGAAGCTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGC
AAAAAGATCAATTATCGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGC
TGACGAAGCCTCCAAACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTC
GCAGCCAGAGTGTCGTGTCACGACGCAGCGCCAGTATCGAACCAGAGGCG
GCCTCGAGGCGTACCGGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGG
AGCTTCTTTGTCTGCCGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTG
CTCAAGCCCCGACGGATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTC
CTCGGTCCTGCGGATGGAGCAAAGAACGAGTATTCAGATGACGAGCAAGA
GGATGACTACGACGAGGATGATGACATGGAGGATGATGGGGTTGACGCGG
CGCTTGCTGGAACCTATGGTGACTATTACGACGAGGGGAGTGATTATGGT
AGTGATTAA
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Coding sequence (CDS) from alignment at MCQH01000199:148888..151146-

>ATCC10864_008269-T1 ID=ATCC10864_008269-T1|Name=ATCC10864_008269-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2259bp|location=Sequence derived from alignment at MCQH01000199:148888..151146- (Aspergillus niger ATCC 10864)
ATGTCGGTCCCTAGGCCTGGGATGCGTGCTCCCATTCCCCCACGGAGCGG
CCCAAGGCCACCTATGGGAAGACTGGCCAGTCTGAAATCGCCCAATCCAA
CTCCCATCAGGCGTCCCCAGCCAATTTCTCGGCCTCAACCCGCCAGGCCA
ACTACCCACCCCAAAACCTCAACTTGCCCTAACCCGGGCTGTCCTGCTCC
TCACATCGTTGAGGATGACGGTCAGAAGGTTTGTTCCGGGTGTGGTACTG
TCATCAGTGAAGCAAACATCGTCTCCGAAGTGACTTTCGGGGAATCGTCG
TCGGGTGCGGCAGTCGTTCAGGGTACCTTCGTCGGCGAAGATCAGTCCCA
TGTCCGCAGTTATGGCCCTGGCTTTCAGCGTGGAGGCGCTGAAAGTCGCG
AGATTACGGAACAGAACGGCAATCGGTACATCACCCAGCTGTCTCGTGCC
TTGACTATCCCAGAGAGTGCCATGAAGGCTGCTGGTCAAGTGTTCAAGCT
AGCAGTCGGATTGAACTTCATTCAAGGTCGAAGGACCAAGACTGTAGCTG
CTGTATGCTTATATATTGCCTGCCGTCGGCAGGATGGCAACACCATCATG
CTCATCGATTTTGCCGATGTTCTCATGATCAACGTGTTCAAGCTCGGTCG
GACCTACAAAGCACTACTCGATGAGTTGCGTCTGGGTGGTAACGTGTTTC
TGATGAACCCGATTGATCCGGAGAGTTTGATCTACAGGTTTGCCAAACAG
CTTGAATTTGGGTCGGCTACTATGCAGGTGGCGAGTGAGGCGGTCCGTAT
CGTACAGCGAATGAACCGCGATTGGATGACGACGGGTCGTCGTCCCGCTG
GTATTTGTGGTGCCGCCTTGATCCTTGCAGCCCGAATGAACAACTTTCGC
CGCACCGTTCGAGAGGTTGTCTACGTCGTCAAAGTCACCGAGATCACTAT
CAGCCAACGTTTGAACGAGTTCAGCTCCACCGAAAGTGGTGAACTTACAG
TCGACCAGTTCCGTTCCGTGCAGCTGGAGAATGCGCATGACCCACCTTCT
TTTGCCAGGGCTAGAGAAGGAAGGAAGCCTTCACGCTCATTCAAGAGACG
GCCCACGGAAACGGCTGCGGAGATTGAGGGTGATATACAAGAAGCACAGC
AACATAGGCGTGTCGACTCAGACGGCTTCGCTATTCCTAGTCTTCCTATT
GACCCGGCATTACTAGCGGCCAGCGGCGGTCAACGTCGCCATTCGACTGC
CTCTGCTGCAAGCGAAGCCATTTCGGACGCTGGCGAGGAGCACGCCAAGT
CCGGTCGCCAGAAGGGTCCGAAGAGACCTCCGCTTCCAGCCCCTTCGCCA
GATCAGATTGCCTCGGAAGAGGCTTTGGAGAATGAAATGACCGCGCTATT
ATCCAAAGGATCGAACATGTTCGAGTCTAGTGCCGGTCCTCCAAAGAAGG
TCGTGTCTGATAATACGGAGATTGACGCTGCTGAGTTTGAGTCGGATCCG
GAGGTGTCTAACTGCTTGCTCTCTCCTGCAGAAGTTGAGATCAAAGAACG
GATTTGGGTCCATGAGAATAAAGATTATCTCCGGGCCCAGCAGGCCAAAG
CGCTAAAGCGAGCTCTGGCGGAGGCTGATTCCCACCCTGGCGCGGACGGT
CGCGTGCACAAGCCGCGAAAGCGCCGCCGCGGTAGACTTGGCGACGTAAC
TTATCTTGAAGGCGAGGGTGAAGATGGGGATGGCCGCAGCACTCGGGCTT
CGACCCCTGCCGAAGCTACCCGCCGGATGTTGGAAAGAAGAGGGTTCAGC
AAAAAGATCAATTATCGTCTTTTGGAGTCACTCTTCGGCGATGAGGGGGC
TGACGAAGCCTCCAAACCTAAGGAAGAGAGTTTGAGCCGAAGCCAGAGTC
GCAGCCAGAGTGTCGTGTCACGACGCAGCGCCAGTATCGAACCAGAGGCG
GCCTCGAGGCGTACCGGGCTTCTAACCCCCTCAGCTAGCCAACCTGCTGG
AGCTTCTTTGTCTGCCGCGGCTCCGGCGCGTGGCTCAGCGGTACCCGCTG
CTCAAGCCCCGACGGATCAAGGTGGAAAAGCAAGTGAGAATGAGCAAGTC
CTCGGTCCTGCGGATGGAGCAAAGAACGAGTATTCAGATGACGAGCAAGA
GGATGACTACGACGAGGATGATGACATGGAGGATGATGGGGTTGACGCGG
CGCTTGCTGGAACCTATGGTGACTATTACGACGAGGGGAGTGATTATGGT
AGTGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000126transcription factor TFIIIB complex
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
GO:0000995RNA polymerase III general transcription initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0006383transcription by RNA polymerase III
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008269ATCC10864_008269Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008269-T1.cdsATCC10864_008269-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008269-T1.exon1ATCC10864_008269-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008269-T1ATCC10864_008269-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013763
InterProIPR029529
InterProIPR013150
InterProIPR036915
InterProIPR000812
PFAMPF00382
InterProIPR011665
PFAMPF07741
Properties
Property NameValue
NoteBUSCO:EOG092613QA
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:148888..151146 -
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