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ATCC10864_008287-T1, ATCC10864_008287-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008287-T1
Unique NameATCC10864_008287-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:202320..204022+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008287-T1 ID=ATCC10864_008287-T1|Name=ATCC10864_008287-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1703bp|location=Sequence derived from alignment at MCQH01000199:202320..204022+ (Aspergillus niger ATCC 10864)
ATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGGCGA
TCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAATATG
CGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACACAAT
GGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGGACCTCCTCA
GGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAGCTT
TCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGGTA
GGTATCCCTATGTTTCCACATATAGAAGGTCAATACTAAACCTCTGGCAG
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAGGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCGTATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGA
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Coding sequence (CDS) from alignment at MCQH01000199:202320..204022+

>ATCC10864_008287-T1 ID=ATCC10864_008287-T1|Name=ATCC10864_008287-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3300bp|location=Sequence derived from alignment at MCQH01000199:202320..204022+ (Aspergillus niger ATCC 10864)
ATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGGCGA
TCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAATATG
CGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACACAAT
GGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGGACCTCCTCA
GGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAGCTT
TCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGTTC
ATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCATCG
CTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGAGCA
ACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTCCTC
TGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATACTT
CTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCGCTC
TCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGCATA
GTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTGGAT
CCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACGTCT
CGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTAGTC
GCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTACGT
TGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATGGCT
CCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTCACC
TTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACACCAC
CATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGCAAG
GCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACCTAC
TCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCAAAT
GCTCCGGCAGGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGGGCA
GTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCCTTG
CTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATATCGC
CCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAATGA
TGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGTCCG
GTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCTGGC
GTATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGGATT
TCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATTTGT
CAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGCTGC
TATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGTATT
ATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCTTGA
ATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGGCGA
TCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAATATG
CGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACACAAT
GGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGGACCTCCTCA
GGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAGCTT
TCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGTTC
ATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCATCG
CTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGAGCA
ACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTCCTC
TGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATACTT
CTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCGCTC
TCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGCATA
GTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTGGAT
CCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACGTCT
CGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTAGTC
GCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTACGT
TGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATGGCT
CCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTCACC
TTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACACCAC
CATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGCAAG
GCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACCTAC
TCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCAAAT
GCTCCGGCAGGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGGGCA
GTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCCTTG
CTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATATCGC
CCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAATGA
TGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGTCCG
GTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCTGGC
GTATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGGATT
TCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATTTGT
CAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGCTGC
TATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGTATT
ATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PNS1ATCC10864_008287Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008287-T1.exon1ATCC10864_008287-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008287-T1.exon2ATCC10864_008287-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008287-T1.cdsATCC10864_008287-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008287-T1ATCC10864_008287-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04515
InterProIPR007603
Properties
Property NameValue
Product neither null mutation nor overexpression affects choline transport
ProductPutative choline transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:202320..204022 +
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