You are here

Home

ATCC10864_008309-T1, ATCC10864_008309-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008309-T1
Unique NameATCC10864_008309-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:275001..276212+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008309-T1 ID=ATCC10864_008309-T1|Name=ATCC10864_008309-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1212bp|location=Sequence derived from alignment at MCQH01000199:275001..276212+ (Aspergillus niger ATCC 10864)
ATGCATGTCAAAAGCTACCTGTCTGCCGTCCTGTACGGATTGCCAGCGCT
GACCCAAGTCGCTGCTGCCAAGTCCACAGGGGATCCTTTCCAACTCTACA
CTATCAGCGCAGAAAACATCACAGCCAAGCTCATCCCTTATGGAGCACGT
TTGACTTCTCTCCTCGTCCCTGACCGCGACGGCAACTTCCAGGATGTTGT
CGTAGGCTACGACGACCCCAAGCAGTATCTCAAGGATACCGAAACCAACC
ACACCTACTTTGGTGCAGTTGTCGGCCGCTACGCCAACCGGATCAAGAAC
GGCACATTCTCAATTGGTTCGGATGTGTACCACATCCCCGAGAACGAGAA
TGACGGTGAAGACACGCTCCACGGAGGTACCGTAGGCTATGACCAGCGCA
ACTGGACCGTGACCGCGTACAGCAATTCCTCCATCACATTCACCCTGGTT
GACCGTGCCTTCGAAGACTTCCCCGGAGACGTCATCACCCATGCCACATT
CAGCGTGCAGACCAAAGTCACCCCCGAGAATCCCCAAGGGCTTCCCCAGT
TGACCACCAAACTCGTCTCTCTTGCCCTGACCGAGACAACCCCAATCATG
CTTGCCAACCACATTTACTGGAACTTGAACGCCTTCAAGGACGAGACTAT
CCTCGAAGACACCTGGCTCCAGCTCCCACTCTCCAAGCGCTTGATCGGCA
CGAACGGCATCCTAATCCCCAACGGCACCATCCTTGACGTCGACGTCTAC
GACGGCGCCCCGGATTTCGTCTCCGGCAAGCTAGTCGGTCAAGACATCGA
GAAAACCGACGGACTCTGCGGAACCGACTGCATCGGGTACGACAACTGCT
TCATCGTAGACCGGCCTCCTCAATACGCAGCTCGTAACTCCATCGTCCCC
ATCATCCACATGAACTCCAGCACCACCGGAATCAGCCTGGACGTCGCTAC
CAACCAGCAAGCTCTTCAGATCTACGCGTGCAATAGCCAGAACGGCACCA
TCCCCGTCAAGCAATCCCAAGTCCAGCGCAACAAGGCCGAGGGTGTCGAT
GGTGCTGAATACGTCAACCAGCATGGTTGCATTGTCATTGAAACTGAGGG
CTGGATTGACGGTATTAACAACCCGCAGTGGGGTCAATTGCCGGATCAGA
TCTATTCTCCTGAGACGGGCCCTGCTGTGAACTGGGCCACTTACCAGTTC
GGTACTGTGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:275001..276212+

>ATCC10864_008309-T1 ID=ATCC10864_008309-T1|Name=ATCC10864_008309-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1212bp|location=Sequence derived from alignment at MCQH01000199:275001..276212+ (Aspergillus niger ATCC 10864)
ATGCATGTCAAAAGCTACCTGTCTGCCGTCCTGTACGGATTGCCAGCGCT
GACCCAAGTCGCTGCTGCCAAGTCCACAGGGGATCCTTTCCAACTCTACA
CTATCAGCGCAGAAAACATCACAGCCAAGCTCATCCCTTATGGAGCACGT
TTGACTTCTCTCCTCGTCCCTGACCGCGACGGCAACTTCCAGGATGTTGT
CGTAGGCTACGACGACCCCAAGCAGTATCTCAAGGATACCGAAACCAACC
ACACCTACTTTGGTGCAGTTGTCGGCCGCTACGCCAACCGGATCAAGAAC
GGCACATTCTCAATTGGTTCGGATGTGTACCACATCCCCGAGAACGAGAA
TGACGGTGAAGACACGCTCCACGGAGGTACCGTAGGCTATGACCAGCGCA
ACTGGACCGTGACCGCGTACAGCAATTCCTCCATCACATTCACCCTGGTT
GACCGTGCCTTCGAAGACTTCCCCGGAGACGTCATCACCCATGCCACATT
CAGCGTGCAGACCAAAGTCACCCCCGAGAATCCCCAAGGGCTTCCCCAGT
TGACCACCAAACTCGTCTCTCTTGCCCTGACCGAGACAACCCCAATCATG
CTTGCCAACCACATTTACTGGAACTTGAACGCCTTCAAGGACGAGACTAT
CCTCGAAGACACCTGGCTCCAGCTCCCACTCTCCAAGCGCTTGATCGGCA
CGAACGGCATCCTAATCCCCAACGGCACCATCCTTGACGTCGACGTCTAC
GACGGCGCCCCGGATTTCGTCTCCGGCAAGCTAGTCGGTCAAGACATCGA
GAAAACCGACGGACTCTGCGGAACCGACTGCATCGGGTACGACAACTGCT
TCATCGTAGACCGGCCTCCTCAATACGCAGCTCGTAACTCCATCGTCCCC
ATCATCCACATGAACTCCAGCACCACCGGAATCAGCCTGGACGTCGCTAC
CAACCAGCAAGCTCTTCAGATCTACGCGTGCAATAGCCAGAACGGCACCA
TCCCCGTCAAGCAATCCCAAGTCCAGCGCAACAAGGCCGAGGGTGTCGAT
GGTGCTGAATACGTCAACCAGCATGGTTGCATTGTCATTGAAACTGAGGG
CTGGATTGACGGTATTAACAACCCGCAGTGGGGTCAATTGCCGGATCAGA
TCTATTCTCCTGAGACGGGCCCTGCTGTGAACTGGGCCACTTACCAGTTC
GGTACTGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO:0003824catalytic activity
GO:0030246carbohydrate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008309ATCC10864_008309Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008309-T1.exon1ATCC10864_008309-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008309-T1.cdsATCC10864_008309-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008309-T1ATCC10864_008309-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014718
InterProIPR011013
PFAMPF01263
InterProIPR008183
Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:275001..276212 +
Powered by Drupal