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ATCC10864_008316-T1, ATCC10864_008316-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008316-T1
Unique NameATCC10864_008316-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:292502..293469+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008316-T1 ID=ATCC10864_008316-T1|Name=ATCC10864_008316-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=968bp|location=Sequence derived from alignment at MCQH01000199:292502..293469+ (Aspergillus niger ATCC 10864)
ATGGCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACAT
TGAGATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGT
CTCACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTC
ATCAACATTGGCAAGACCTGGTATGTTGATCAGGCGATATATTGCGCGCA
ACTCATTTAGGATCGCTGCCTAACACCGCGCGAAAACTTAGGGAGAAGAT
CCTCCTCGCTGCCCGTATCATCGCCGCCATCGACAACCCGGCCGACATCT
GTGTCATCTCCGCTCGTCCCTACGGCCAGCGTGCTGTCCTGAAGTTCGCC
TCCCACACCGGTGCTACCGCCATTGCTGGTCGTTTCACCCCCGGTAACTT
CACCAACTACATCACCCGCTCTTTCAAGGAGCCCCGCCTGATCATCGTCA
CCGACCCTCGCACCGACGCCCAGGCCATCAAGGAGGCCAGCTACGTCAAC
ATCCCCGTCATTGCCCTTTGCGACACTGACTCCCCCACCGACTTCGTTGA
CGTTGCTATCCCCACCAACAACAAGGGTCGCCACGCCATCGGTCTCGTCT
GGTGGCTCCTTGCCCGTGAGGTCCTCCGCCTCCGTGGTACCCTCGCTTCC
CGTGAGGTTGACTGGGACGTCGTTGTCGACCTGTACTTCTACCGTGACCC
CGAGGCTGAGGAGAACAAGGAGGTCGTCGAGGAGAAGGTTGCCAGCGCTG
AGGAGGTCGGTGCTGGTGCCATCGAGTCCGGCTTCGCTGGTGAGAACTGG
GATGTTGCCGGTGCCGGTGCCGGTGTTCCTGGCACTGCTTTCGCTGCTGC
TAGCGCTGCTGCTGGTGCTGCCAGCTGGGAGGCCGAGGGTGGCGACTGGG
CTGCCAGCTCTGCCGCTCCTGCTGGTGAGAGCTGGGCTGAGGCCCAGCCC
ACCGAGGCTAAGTGGTAA
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Coding sequence (CDS) from alignment at MCQH01000199:292502..293469+

>ATCC10864_008316-T1 ID=ATCC10864_008316-T1|Name=ATCC10864_008316-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1794bp|location=Sequence derived from alignment at MCQH01000199:292502..293469+ (Aspergillus niger ATCC 10864)
ATGGCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACAT
TGAGATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGT
CTCACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTC
ATCAACATTGGCAAGACCTGGGAGAAGATCCTCCTCGCTGCCCGTATCAT
CGCCGCCATCGACAACCCGGCCGACATCTGTGTCATCTCCGCTCGTCCCT
ACGGCCAGCGTGCTGTCCTGAAGTTCGCCTCCCACACCGGTGCTACCGCC
ATTGCTGGTCGTTTCACCCCCGGTAACTTCACCAACTACATCACCCGCTC
TTTCAAGGAGCCCCGCCTGATCATCGTCACCGACCCTCGCACCGACGCCC
AGGCCATCAAGGAGGCCAGCTACGTCAACATCCCCGTCATTGCCCTTTGC
GACACTGACTCCCCCACCGACTTCGTTGACGTTGCTATCCCCACCAACAA
CAAGGGTCGCCACGCCATCGGTCTCGTCTGGTGGCTCCTTGCCCGTGAGG
TCCTCCGCCTCCGTGGTACCCTCGCTTCCCGTGAGGTTGACTGGGACGTC
GTTGTCGACCTGTACTTCTACCGTGACCCCGAGGCTGAGGAGAACAAGGA
GGTCGTCGAGGAGAAGGTTGCCAGCGCTGAGGAGGTCGGTGCTGGTGCCA
TCGAGTCCGGCTTCGCTGGTGAGAACTGGGATGTTGCCGGTGCCGGTGCC
GGTGTTCCTGGCACTGCTTTCGCTGCTGCTAGCGCTGCTGCTGGTGCTGC
CAGCTGGGAGGCCGAGGGTGGCGACTGGGCTGCCAGCTCTGCCGCTCCTG
CTGGTGAGAGCTGGGCTGAGGCCCAGCCCACCGAGGCTAAGTGGTAAATG
GCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACATTGA
GATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGTCTC
ACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTCATC
AACATTGGCAAGACCTGGGAGAAGATCCTCCTCGCTGCCCGTATCATCGC
CGCCATCGACAACCCGGCCGACATCTGTGTCATCTCCGCTCGTCCCTACG
GCCAGCGTGCTGTCCTGAAGTTCGCCTCCCACACCGGTGCTACCGCCATT
GCTGGTCGTTTCACCCCCGGTAACTTCACCAACTACATCACCCGCTCTTT
CAAGGAGCCCCGCCTGATCATCGTCACCGACCCTCGCACCGACGCCCAGG
CCATCAAGGAGGCCAGCTACGTCAACATCCCCGTCATTGCCCTTTGCGAC
ACTGACTCCCCCACCGACTTCGTTGACGTTGCTATCCCCACCAACAACAA
GGGTCGCCACGCCATCGGTCTCGTCTGGTGGCTCCTTGCCCGTGAGGTCC
TCCGCCTCCGTGGTACCCTCGCTTCCCGTGAGGTTGACTGGGACGTCGTT
GTCGACCTGTACTTCTACCGTGACCCCGAGGCTGAGGAGAACAAGGAGGT
CGTCGAGGAGAAGGTTGCCAGCGCTGAGGAGGTCGGTGCTGGTGCCATCG
AGTCCGGCTTCGCTGGTGAGAACTGGGATGTTGCCGGTGCCGGTGCCGGT
GTTCCTGGCACTGCTTTCGCTGCTGCTAGCGCTGCTGCTGGTGCTGCCAG
CTGGGAGGCCGAGGGTGGCGACTGGGCTGCCAGCTCTGCCGCTCCTGCTG
GTGAGAGCTGGGCTGAGGCCCAGCCCACCGAGGCTAAGTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS0ATCC10864_008316Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008316-T1.exon1ATCC10864_008316-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008316-T1.exon2ATCC10864_008316-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008316-T1.cdsATCC10864_008316-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008316-T1ATCC10864_008316-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001865
InterProIPR023591
PFAMPF16122
InterProIPR032281
InterProIPR027498
InterProIPR018130
InterProIPR005707
Properties
Property NameValue
Productstructural constituent of ribosome
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:292502..293469 +
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