You are here

Home

ATCC10864_008322-T1, ATCC10864_008322-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008322-T1
Unique NameATCC10864_008322-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:303930..305866+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008322-T1 ID=ATCC10864_008322-T1|Name=ATCC10864_008322-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1937bp|location=Sequence derived from alignment at MCQH01000199:303930..305866+ (Aspergillus niger ATCC 10864)
ATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAA
GGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTT
CCACCGCAGAGGGTGTTTCTAACCTGTAAGTGCATTCTCATGCATTGTTT
ACTCTATTCACCCCCGATTGTCCGTCATCTGCGCGTGGTGTCTCAAAAGC
AAAAATTTTCCCCCACCGCGTCTGTACTTCGGCTAACCGCCGCAATTGTA
GTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCCCTG
GAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGCCAG
CCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCGCCG
ACCCCAAGCTCGGTATGTGGCGCAAAGTTGTGTGGAAACTGAGGGTAAAT
TTTTCGTATGACTGACTGGAATTGGTGTAGGCAATGCTATTGGCAAGCTC
CCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTT
CCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTC
AGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACAC
AAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCAT
TGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTG
TGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAAC
GACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAA
CTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTG
CCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAG
GATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGA
ATATCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCG
CCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATC
GCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCT
CCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGC
ACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAG
GCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGC
TTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCA
CCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAG
CGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGC
CATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAG
CCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCT
TCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGA
GGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACG
AGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAG
TTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGA
GCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCA
AGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGT
GAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGA
GAAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:303930..305866+

>ATCC10864_008322-T1 ID=ATCC10864_008322-T1|Name=ATCC10864_008322-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5229bp|location=Sequence derived from alignment at MCQH01000199:303930..305866+ (Aspergillus niger ATCC 10864)
ATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAA
GGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTT
CCACCGCAGAGGGTGTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAG
TTCGACAGCGCTGCTACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGG
AAAGGTTACTCCTCGCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGA
AGAAGGTCTCTCTGGCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGC
AAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGA
CGTCTTCCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTC
TTCCTCAGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCT
AGACACAAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCA
GGCCATTGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCA
TGCGTGTGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATC
TTGAACGACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCG
CACCAACTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTG
AGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGC
CAGGAGGATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTT
CGCTGAATATCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACG
CCATCGCCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGT
CTTATCGCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAG
TACTCTCCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGA
CCAAGCACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATC
GGCCAGGCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGC
CAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATG
ATGCCACCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAAC
CTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGG
TGTTGCCATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCA
ACGAAGCCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAG
CCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCA
GGACGAGGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGT
CCGACGAGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTC
GAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAA
GCTTGAGCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAG
TCAGCAAGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCC
AAGGGTGAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAA
CTCCGAGAAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAAATGACGC
TCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAAGGCCAAG
GACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTTCCACCGC
AGAGGGTGTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACA
GCGCTGCTACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTT
ACTCCTCGCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGT
CTCTCTGGCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGCAAGCTCC
CTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTTC
CGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTCA
GGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACACA
AGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCATT
GGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTGT
GAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAACG
ACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAAC
TGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTGC
CGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAGG
ATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGAA
TATCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCGC
CCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATCG
CCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCTC
CAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGCA
CGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAGG
CCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGCT
TCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCAC
CGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAGC
GCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGCC
ATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAGC
CCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCTT
CCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGAG
GAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACGA
GGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAGT
TGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGAG
CGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCAA
GAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGTG
AGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGAG
AAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAAATGACGCTCTTTAT
CCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAAGGCCAAGGACAAGA
AGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTTCCACCGCAGAGGGT
GTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGC
TACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTC
GCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTG
GCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGCAAGCTCCCTGGCCT
CTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTTCCGTGCCA
TTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTCAGGACATG
TCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACACAAGCTCAA
GTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCATTGGTCTGC
TTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTGTGAAGGAA
TGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAACGACAACAT
CGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAACTGGGAGT
CTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTGCCGTCAAG
GCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAGGATCTGGA
ACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGAATATCGTC
AACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCGCCCCCAAC
CTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATCGCCCACGC
TGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCTCCAGATCC
TGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGCACGATACC
CCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAGGCCACCGG
CAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGCTTCCCTTG
GTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCACCGAGGAG
GACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAGCGCAAGCT
GGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGCCATTGCCC
CCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAGCCCGCAAA
TACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCTTCCGCTAA
GAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGAGGAGATGG
CCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACGAGGAGACC
GACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAGTTGGCCGA
GAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGAGCGTGGAG
AAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCAAGAAGGAC
ATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGTGAGGAGAA
GAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGAGAAGAAAA
AGAAGAAGAAGAAGAAGGGCGAGGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP58ATCC10864_008322Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008322-T1.exon1ATCC10864_008322-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008322-T1.exon2ATCC10864_008322-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008322-T1.exon3ATCC10864_008322-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008322-T1.cdsATCC10864_008322-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008322-T1ATCC10864_008322-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002687
PFAMPF01798
InterProIPR036070
InterProIPR012976
InterProIPR012974
PFAMPF08156
InterProIPR042239
Properties
Property NameValue
ProductNucleolar protein 58
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:303930..305866 +
Powered by Drupal