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ATCC10864_008333-T1, ATCC10864_008333-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008333-T1
Unique NameATCC10864_008333-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:331823..332952+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008333-T1 ID=ATCC10864_008333-T1|Name=ATCC10864_008333-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1130bp|location=Sequence derived from alignment at MCQH01000199:331823..332952+ (Aspergillus niger ATCC 10864)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGGTATGCATTGCTACAGGTCATG
TGGTTCTTTCAGGGTTCGAAAACATCCTCTAATACTTGTCTTTTCACCCC
TCACAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAA
CATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTA
GTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTT
CGTGTGGACAAGGAGAAGGGCAAGTCGGAGTCCTCTGGATGACAATATCA
GCGTCAATTTACTGACTCTTTTTTCTCTACGTCTTTAGGTTACATTGATC
TTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGA
TACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGC
CACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGA
ACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACGTAA
GGAAACCTCTCGACTCAAGGCTATCGCGGACCGAGTACTCATAACATCAC
AGGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAA
GAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCA
AGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGAT
GCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAAC
CCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCC
AGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAA
AGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGAT
GGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCA
TGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATG
TCCGAGAGCGATGAGGGCGTTCCCGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000199:331823..332952+

>ATCC10864_008333-T1 ID=ATCC10864_008333-T1|Name=ATCC10864_008333-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3636bp|location=Sequence derived from alignment at MCQH01000199:331823..332952+ (Aspergillus niger ATCC 10864)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGGGCGCATACG
TTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGCTCTCCGAA
TTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGTATCGGCCG
TAACGAGGTCGTCATCGTGCTTCGTTACATTGATCTTTCCAAGCGTCGAG
TTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAG
GCAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCT
TGAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGAC
ACTCCCACGATGCGTTCAAGATCTCCATCACGAACCCCGACGTGTGGAAC
GAGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACAT
CAGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGG
TTACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGC
ACCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGT
TGCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTG
GTATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAG
GAGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGA
GCACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGA
ACATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTT
CCCGAGTAAATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCC
GGAGGTTGACAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGG
GCGCATACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTG
CTCTCCGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCG
TATCGGCCGTAACGAGGTCGTCATCGTGCTTCGTTACATTGATCTTTCCA
AGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAAC
AAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCA
GACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCA
AATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACGAACCCCGAC
GTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGAC
GCACTACATCAGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCG
ATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGAT
GCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGT
TAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACA
AGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCC
AGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGC
TGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTG
AGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGAT
GAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCCGTTTCTACGAGGA
GAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATGTGAAGCAGATCG
CCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAACATCGACGGC
ATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAA
GCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTCGTTACATTG
ATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAA
AGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGA
GGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTT
TGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACG
AACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGAA
GGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCAAGG
TCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGCC
GTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCCA
GATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAGT
GCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAGG
ATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGGC
TCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATGG
AGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTCC
GAGAGCGATGAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCCGTTT
CTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATGTGA
AGCAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAAC
ATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAG
TATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTC
GTTACATTGATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAG
TGCGAGGAAAGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCA
CGTTGCCGAGGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCG
GATGGCCTTTGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATC
TCCATCACGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTC
CGTGAAGAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACC
CGACCAAGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGT
ATCGATGCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCC
TGAAACCCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGA
CCAGCCAGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCC
ATTCAAAGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGT
TAAGATGGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGG
AGCTCATGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAG
AGCATGTCCGAGAGCGATGAGGGCGTTCCCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008333ATCC10864_008333Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008333-T1.exon1ATCC10864_008333-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008333-T1.exon2ATCC10864_008333-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008333-T1.exon3ATCC10864_008333-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008333-T1.exon4ATCC10864_008333-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008333-T1.cdsATCC10864_008333-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008333-T1ATCC10864_008333-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07541
InterProIPR024054
InterProIPR012340
InterProIPR044126
InterProIPR011488
InterProIPR003029
InterProIPR024055
PFAMPF00575
Properties
Property NameValue
NoteantiSMASH:Cluster_1000199.3
NoteBUSCO:EOG09263CAH
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:331823..332952 +
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